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Equivalence class NR_all_72076.4 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16FYY|1|2 (rep)Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)Electron microscopy3.022018-12-05
26FYX|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)Electron microscopy3.52018-12-05
33JAM|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960CryoEM structure of 40S-eIF1A-eIF1 complex from yeastElectron microscopy3.462015-08-12
43J80|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960CryoEM structure of 40S-eIF1-eIF1A preinitiation complexElectron microscopy3.752014-11-05
55IT7|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2Electron microscopy3.62016-05-18
63J81|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960CryoEM structure of a partial yeast 48S preinitiation complexElectron microscopy42014-11-05
75IT9|1|2Small subunit ribosomal RNA18S ribosomal RNAKluyveromyces lactisEukaryaRF01960Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES.Electron microscopy3.82016-05-18
84V92|1|A2Small subunit ribosomal RNA18S RRNAKluyveromyces lactisEukaryaRF01960Kluyveromyces lactis 80S ribosome in complex with CrPV-IRESElectron microscopy3.72014-07-09
93JAP|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960Structure of a partial yeast 48S preinitiation complex in closed conformationElectron microscopy4.92015-08-12
103JAQ|1|2Small subunit ribosomal RNA18S rRNAKluyveromyces lactisEukaryaRF01960Structure of a partial yeast 48S preinitiation complex in open conformationElectron microscopy62015-08-12

Release history

Release3.51
Date2018-12-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_72076.4NR_all_72076.33.51(7) 3J81|1|2, 3J80|1|2, 5IT9|1|2, 4V92|1|A2, 3JAQ|1|2, 3JAP|1|2, 3JAM|1|2(3) 6FYX|1|2, 5IT7|1|2, 6FYY|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_72076.4NR_all_72076.53.52(9) 6FYX|1|2, 3J80|1|2, 3JAM|1|2, 3JAQ|1|2, 5IT9|1|2, 6FYY|1|2, 3J81|1|2, 3JAP|1|2, 4V92|1|A2(1) 5IT7|1|2(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16FYY|1|2Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2)ELECTRON MICROSCOPY3.021768
26FYX|1|2Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1)ELECTRON MICROSCOPY3.51768
33J81|1|2CryoEM structure of a partial yeast 48S preinitiation complexELECTRON MICROSCOPY41780
43JAP|1|2Structure of a partial yeast 48S preinitiation complex in closed conformationELECTRON MICROSCOPY4.91780
55IT9|1|2Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES.ELECTRON MICROSCOPY3.81780
65IT7|1|2Structure of the Kluyveromyces lactis 80S ribosome in complex with the cricket paralysis virus IRES and eEF2ELECTRON MICROSCOPY3.61780
73J80|1|2CryoEM structure of 40S-eIF1-eIF1A preinitiation complexELECTRON MICROSCOPY3.751779
83JAM|1|2CryoEM structure of 40S-eIF1A-eIF1 complex from yeastELECTRON MICROSCOPY3.461780
94V92|1|A2Kluyveromyces lactis 80S ribosome in complex with CrPV-IRESELECTRON MICROSCOPY3.71764
103JAQ|1|2Structure of a partial yeast 48S preinitiation complex in open conformationELECTRON MICROSCOPY61780
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