#IFECompound(s)RNA source organismTitleMethodResolutionDate
16N6C|1|D (rep)RNA (5'-R(P*AP*A)-3')synthetic constructVibrio cholerae Oligoribonuclease bound to pAAX-RAY DIFFRACTION1.622019-06-12
26N6J|1|CRNA (5'-R(P*AP*A)-3')synthetic constructHuman REXO2 bound to pAAX-RAY DIFFRACTION1.322019-06-12
36N6J|1|DRNA (5'-R(P*AP*A)-3')synthetic constructHuman REXO2 bound to pAAX-RAY DIFFRACTION1.322019-06-12
46RCL|1|CRNA (5'-R(P*AP*A)-3')synthetic constructCrystal structure of REXO2-D199A-AAX-RAY DIFFRACTION1.972019-10-09
55JJU|1|CRNA (5'-R(P*AP*A)-3')synthetic constructCrystal structure of Rv2837c complexed with 5'-pApA and 5'-AMPX-RAY DIFFRACTION2.312016-05-04
64EJT|1|G5'-R(*AP*A)-3'Staphylococcus epidermidis TcaR in complex with RNAX-RAY DIFFRACTION32013-06-05
75CEU|1|CRNA (5'-R(P*AP*A)-3')Crystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362015-12-23
85CEU|1|DRNA (5'-R(P*AP*A)-3')Crystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362015-12-23
93J0O|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY92011-11-16
103J0L|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.82011-11-16
113J0Q|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2ELECTRON MICROSCOPY10.62011-11-16
123J0P|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1ELECTRON MICROSCOPY10.62011-11-16

Release history

Release3.953.963.973.983.993.1003.1013.1023.1033.1043.105
Date2019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_80570.8NR_all_80570.73.95(11) 6N6J|1|D, 6N6J|1|C, 6N6C|1|D, 5JJU|1|C, 5CEU|1|D, 5CEU|1|C, 4EJT|1|G, 3J0Q|1|w, 3J0P|1|w, 3J0O|1|w, 3J0L|1|w(1) 6RCL|1|C(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_80570.8NR_all_80570.93.106(12) 3J0Q|1|w, 6N6C|1|D, 3J0P|1|w, 5JJU|1|C, 3J0O|1|w, 5CEU|1|D, 6RCL|1|C, 3J0L|1|w, 5CEU|1|C, 6N6J|1|D, 4EJT|1|G, 6N6J|1|C(0) (3) 6P7Q|1|D, 6P7Q|1|E, 6P7Q|1|F

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13J0L|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.82
23J0Q|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2ELECTRON MICROSCOPY10.62
33J0P|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1ELECTRON MICROSCOPY10.62
43J0O|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY92
54EJT|1|GStaphylococcus epidermidis TcaR in complex with RNAX-RAY DIFFRACTION32
65CEU|1|CCrystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362
75CEU|1|DCrystal structure of Rv2837c complexed with 5'-pApAX-RAY DIFFRACTION2.362
85JJU|1|CCrystal structure of Rv2837c complexed with 5'-pApA and 5'-AMPX-RAY DIFFRACTION2.312
96RCL|1|CCrystal structure of REXO2-D199A-AAX-RAY DIFFRACTION1.972
106N6J|1|DHuman REXO2 bound to pAAX-RAY DIFFRACTION1.323
116N6J|1|CHuman REXO2 bound to pAAX-RAY DIFFRACTION1.323
126N6C|1|DVibrio cholerae Oligoribonuclease bound to pAAX-RAY DIFFRACTION1.622