#IFECompound(s)RNA source organismTitleMethodResolutionDate
15J7L|1|DA (rep)23S rRNAEscherichia coliStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32016-07-27
25J8A|1|DA23S rRNAEscherichia coliStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12016-07-06
35JC9|1|DA23S rRNAEscherichia coliStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032016-07-06
44YBB|1|DA23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
55IT8|1|DA23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122016-07-27
64WOI|1|BA23S ribosomal RNAEscherichia coli4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32015-08-05
74WOI|1|CA23S ribosomal RNAEscherichia coli4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32015-08-05
85J91|1|DA23S rRNAEscherichia coliStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962016-07-06
94V9P|1|EA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
105J88|1|DA23S rRNAEscherichia coliStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322016-07-06
114V9P|1|CA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
124V9P|1|GA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
134V9P|1|AA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
144V9D|1|CA23S rRNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
154V9O|1|AA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
164V9O|1|EA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
174WWW|1|RA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12014-12-24
184V9O|1|CA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
194V6C|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192014-07-09
205J7L|1|CA23S rRNAEscherichia coliStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32016-07-27
214U27|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82014-07-30
224V7T|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192014-07-09
234WF1|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092014-11-05
245J8A|1|CA23S rRNAEscherichia coliStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12016-07-06
255JC9|1|CA23S rRNAEscherichia coliStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032016-07-06
264V7U|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12014-07-09
274V7V|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292014-07-09
284V52|1|DB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212014-07-09
294U24|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92014-07-30
304U25|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92014-07-30
314V9D|1|DA23S rRNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
324U26|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82014-07-30
334V7S|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252014-07-09
344V57|1|DB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52014-07-09
354V52|1|BB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212014-07-09
364V57|1|BB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52014-07-09
374V9O|1|GA23S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
384U1U|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952014-07-30
394V85|1|BA23S rRNAEscherichia coliCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22014-07-09
404V54|1|DB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32014-07-09
414V64|1|DB23S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52014-07-09
424V50|1|DB23S ribosomal RNAEscherichia coliCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222014-07-09
434V54|1|BB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32014-07-09
444V64|1|BB23S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52014-07-09
454V53|1|DB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542014-07-09
464V50|1|BB23S ribosomal RNAEscherichia coliCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222014-07-09
474U1V|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32014-07-30
484YBB|1|CA23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
495J88|1|CA23S rRNAEscherichia coliStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322016-07-06
504V9C|1|DA23S ribosomal RNAEscherichia coliAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32014-07-09
514V53|1|BB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542014-07-09
524V56|1|DB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932014-07-09
534U20|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92014-07-30
544V56|1|BB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932014-07-09
554U27|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82014-07-30
564V55|1|DB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42014-07-09
574V4Q|1|DB23S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462014-07-09
584V55|1|BB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42014-07-09
594V4Q|1|BB23S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462014-07-09
604V6D|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812014-07-09
614U25|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92014-07-30
624U1U|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952014-07-30
634V9C|1|BA23S ribosomal RNAEscherichia coliAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32014-07-09
644U1V|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32014-07-30
654V89|1|BA23S rRNAEscherichia coliCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72014-07-09
665IT8|1|CA23S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122016-07-27
674V6E|1|BA23S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712014-07-09
684WF1|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092014-11-05
694U24|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92014-07-30
704U26|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82014-07-30
714U20|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92014-07-30
725J91|1|CA23S rRNAEscherichia coliStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962016-07-06
734V6C|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192014-07-09
744V5Y|1|DB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452014-07-09
754WWW|1|YA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12014-12-24
764V7T|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192014-07-09
774V5Y|1|BB23S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452014-07-09
784V6D|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812014-07-09
794V7V|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292014-07-09
804V7S|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252014-07-09
814V7U|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12014-07-09
824V6E|1|DA23S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712014-07-09
834V5B|1|CB23S RIBOSOMAL RNAEscherichia coliStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742014-07-09
844V5B|1|AB23S RIBOSOMAL RNAEscherichia coliStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742014-07-09
855J5B|1|DA23S rRNAEscherichia coliStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82016-07-27
864V4H|1|DB23S RIBOSOMAL RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462014-07-09
874V4H|1|BB23S RIBOSOMAL RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462014-07-09
885J5B|1|CA23S rRNAEscherichia coliStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82016-07-27
895AFI|1|A23S ribosomal RNAEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
905NWY|1|N23S rRNAEscherichia coli2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.92017-07-19
915H5U|1|A23S rRNAEscherichia coliMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.012017-01-25
925MDV|1|123S ribosomal RNAEscherichia coliStructure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972016-12-14
935MDW|1|123S ribosomal RNAEscherichia coliStructure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.062016-12-14
945MGP|1|A23S ribosomal RNAEscherichia coliStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.12016-12-14
955U9G|1|0123S ribosomal RNAEscherichia coli3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.22017-03-22
965U9F|1|0123S ribosomal RNAEscherichia coli3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.22017-03-22
975MDZ|1|123S ribosomal RNAEscherichia coliStructure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.12016-12-14
985UYM|1|0123S ribosomal RNAEscherichia coli70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.22017-06-07
996ENU|1|A23S Ribosomal RNAEscherichia coliPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.12017-11-22
1003JBV|1|bRNA (2903-MER)Escherichia coliMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322016-01-27
1015WE4|1|A23S rRNAEscherichia coli70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.12018-04-25
1026C4I|1|A23S rRNAEscherichia coliConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.242018-02-21
1034V80|1|BA23S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.32014-07-09
1044V80|1|DA23S rRNACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.32014-07-09
1055WDT|1|A23S rRNAEscherichia coli70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY32018-04-25
1066ENF|1|A23S ribosomal RNAEscherichia coliCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.22017-11-22
1075GAE|1|A23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliRNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332016-01-27
1083JCE|1|A23 ribosomal RNAEscherichia coliStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22016-01-13
1095MDY|1|123S ribosomal RNAEscherichia coliStructure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.352016-12-21
1105LZD|1|A23S ribosomal RNAEscherichia coliStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.42016-11-23
1115WE6|1|A23S rRNAEscherichia coli70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.42018-04-25
1126BU8|1|0123S ribosomal RNAEscherichia coli70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.52018-01-31
1135O2R|1|A23S ribosomal RNAEscherichia coliCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.42017-07-26
1145LZE|1|A23S ribosomal RNAEscherichia coliStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.52016-11-23
1155U4I|1|A23S rRNAEscherichia coliStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.52017-01-11
1165UYL|1|0123S ribosomal RNAEscherichia coli70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.62017-06-14
1175IQR|1|1LSU rRNAEscherichia coliStructure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32016-05-04
1183JBU|1|b23S rRNAEscherichia coliMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642016-01-27
1195LZA|1|A23S ribosomal RNAEscherichia coliStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.62016-11-23
1205KCR|1|1A23S Ribosomal RNAEscherichia coliCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.62016-08-17
1215JU8|1|BA23S ribosomal RNAEscherichia coliCryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.62016-07-20
1225JTE|1|BA23S ribosomal RNAEscherichia coliCryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.62016-07-20
1233J9Z|1|LA23S ribosomal RNAEscherichia coliActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
1243JCJ|1|A23S ribosomal RNAEscherichia coliStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72016-03-09
1255UYQ|1|0123S ribosomal RNAEscherichia coli70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.82017-06-07
1266ENJ|1|A23S Ribosomal RNAEscherichia coliPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.72017-11-22
1275L3P|1|A23S ribosomal RNAEscherichia coliCryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.72016-07-20
1285GAD|1|A23S rRNA, tRNA CCAendEscherichia coliRNC-SRP-SR complex early stateELECTRON MICROSCOPY3.72016-01-27
1295UYP|1|0123S ribosomal RNAEscherichia coli70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.92017-06-07
1305UYK|1|0123S ribosomal RNAEscherichia coli70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.92017-06-07
1315KPW|1|2723S ribosomal RNAEscherichia coliStructure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.92016-09-28
1325GAG|1|A23S rRNA, tRNA CCAendEscherichia coliRNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.82016-01-27
1335GAH|1|A23S rRNA, tRNA CCAendEscherichia coliRNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.82016-01-27
1345KPS|1|2823S ribosomal RNAEscherichia coliStructure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.92016-09-28
1355UYN|1|0123S ribosomal RNAEscherichia coli70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY42017-06-07
1363J9Y|1|A23S ribosomal RNAEscherichia coliCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92015-04-15
1375KPX|1|2723S ribosomal RNAEscherichia coliStructure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.92016-09-28
1383JCD|1|A23S ribosomal RNAEscherichia coliStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72016-01-13
1394UY8|1|ARRNA-23S RIBOSOMAL RNAEscherichia coliMolecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.82014-10-29
1405KCS|1|1A23S Ribosomal RNAEscherichia coliCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.92016-08-17
1413J7Z|1|A23S rRNA, P-tRNA CCA-endEscherichia coliStructure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.92014-10-22
1425NP6|1|Y23S ribosomal RNAEscherichia coli70S structure prior to bypassingELECTRON MICROSCOPY3.62017-06-14
1435KPV|1|2723S ribosomal RNAEscherichia coliStructure of RelA bound to ribosome in presence of A/R tRNA (Structure II)ELECTRON MICROSCOPY4.12016-09-28
1445GAF|1|A23S ribosomal RNA, tRNA CCAendEscherichia coliRNC in complex with SRPELECTRON MICROSCOPY4.32016-02-03
1453JA1|1|LA23S ribosomal RNAEscherichia coliActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
1463JCN|1|A23S ribosomal RNAEscherichia coliStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.62016-03-09
1475LZF|1|A23S ribosomal RNAEscherichia coliStructure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)ELECTRON MICROSCOPY4.62016-11-23
1485LZC|1|A23S ribosomal RNAEscherichia coliStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)ELECTRON MICROSCOPY4.82016-11-23
1495NCO|1|A23S rRNA, P-site tRNA-CCA endEscherichia coliQuaternary complex between SRP, SR, and SecYEG bound to the translating ribosomeELECTRON MICROSCOPY4.82017-05-24
1505LZB|1|A23S ribosomal RNAEscherichia coliStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)ELECTRON MICROSCOPY5.32016-11-23
1514CSU|1|B23S RRNAEscherichia coliCryo-EM structures of the 50S ribosome subunit bound with ObgEELECTRON MICROSCOPY5.52014-06-04
1524V5H|1|BB23S RIBOSOMAL RNAEscherichia coliE.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.ELECTRON MICROSCOPY5.82014-07-09
1536C4H|1|A23S rRNA, P-site tRNA fMetEscherichia coliConformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)ELECTRON MICROSCOPY3.12018-02-21
1543J8G|1|B23S rRNAEscherichia coliElectron cryo-microscopy structure of EngA bound with the 50S ribosomal subunitELECTRON MICROSCOPY52014-11-26
1554V69|1|BB23S ribosomal RNAEscherichia coliTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72014-07-09
1565AKA|1|B23S ribosomal RNAEscherichia coliEM structure of ribosome-SRP-FtsY complex in closed stateELECTRON MICROSCOPY5.72015-03-25
1574V6M|1|B823S RIBOSOMAL RNAEscherichia coliStructure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.12014-07-09
1585ADY|1|B23S RRNAEscherichia coliCryo-EM structures of the 50S ribosome subunit bound with HflXELECTRON MICROSCOPY4.52015-10-14
1594V7B|1|BA23S ribosomal RNAEscherichia coliVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.82014-07-09
1603J5L|1|A23S ribsomal RNA, 5'-R(*CP*CP*A)-3', 5'-R(*CP*(MA6))-3'Escherichia coliStructure of the E. coli 50S subunit with ErmBL nascent chainELECTRON MICROSCOPY6.62014-03-26
1615U4J|1|A23S rRNAEscherichia coliStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.72017-01-11
1624V7C|1|BA23S ribosomal RNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.62014-07-09
1634V7D|1|AA23S ribosomal RNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.62014-07-09
1644V6K|1|ABribosomal RNA 23SEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.252014-07-09
1654V7A|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY92014-07-09
1664V65|1|BB23S rRNAEscherichia coliStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92014-07-09
1674V66|1|BB23S rRNAEscherichia coliStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92014-07-09
1684V6T|1|BA23S ribosomal RNAEscherichia coliStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.32014-07-09
1692J28|1|B23S RIBOSOMAL RNAEscherichia coliMODEL OF E. COLI SRP BOUND TO 70S RNCSELECTRON MICROSCOPY9.52006-11-08
1702RDO|1|B23S RIBOSOMAL RNAEscherichia coli50S subunit with EF-G(GDPNP) and RRF boundELECTRON MICROSCOPY9.12008-03-04
1714V6V|1|BA23S ribosomal RNAEscherichia coliTetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82014-07-09
1724V6R|1|BB23S ribomosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
1734V6Q|1|BB23S ribomosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
1744V7I|1|A823S ribosomal RNAEscherichia coliRibosome-SecY complex.ELECTRON MICROSCOPY9.62014-07-09
1754V48|1|A023S ribosomal RNAEscherichia coliReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.52014-07-09
1764V75|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY122014-07-09
1774V6Z|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY122014-07-09
1784V6Y|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY122014-07-09
1793BBX|1|B23S ribosomal RNAEscherichia coliThe Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexELECTRON MICROSCOPY102008-10-21
1804V6N|1|AB23S ribosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12014-07-09
1814V47|1|A023S ribosomal RNAEscherichia coliReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeELECTRON MICROSCOPY12.32014-07-09
1824V72|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY132014-07-09
1834V6S|1|AB23S ribomosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.12014-07-09
1844V6L|1|BB50S ribosomal RNA 23SEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.22014-07-09
1854V6P|1|BB23S ribomosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.52014-07-09
1864V6O|1|BB23S ribomosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.72014-07-09
1874V73|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY152014-07-09
1884V79|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY152014-07-09
1894V4W|1|B023S ribosomal RNAEscherichia coliStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152014-07-09
1904V4V|1|B023S ribosomal RNAEscherichia coliStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152014-07-09
1914V76|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY172014-07-09
1924V70|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY172014-07-09
1934V74|1|BA23S ribosomal RNAEscherichia coli70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY172014-07-09
1944V77|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY172014-07-09
1951C2W|1|B23S RIBOSOMAL RNAEscherichia coli23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTIONELECTRON MICROSCOPY7.52000-04-10
1964V78|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY202014-07-09
1974V71|1|BA23S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY202014-07-09

Release history

Release3.19
Date2018-04-27

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15U4J|1|AStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.79
25NCO|1|AQuaternary complex between SRP, SR, and SecYEG bound to the translating ribosomeELECTRON MICROSCOPY4.82883
35GAH|1|ARNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.82883
45GAF|1|ARNC in complex with SRPELECTRON MICROSCOPY4.32883
55GAD|1|ARNC-SRP-SR complex early stateELECTRON MICROSCOPY3.72883
65GAG|1|ARNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.82883
75MDY|1|1Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.352881
85L3P|1|ACryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.72866
94V6M|1|B8Structure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.12904
104V5H|1|BBE.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.ELECTRON MICROSCOPY5.82903
114V6V|1|BATetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82881
124V6L|1|BBStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.22880
134V6K|1|ABStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.252880
144V7I|1|A8Ribosome-SecY complex.ELECTRON MICROSCOPY9.62903
153JBU|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642903
165AKA|1|BEM structure of ribosome-SRP-FtsY complex in closed stateELECTRON MICROSCOPY5.72841
175GAE|1|ARNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332884
185NP6|1|Y70S structure prior to bypassingELECTRON MICROSCOPY3.62879
195ADY|1|BCryo-EM structures of the 50S ribosome subunit bound with HflXELECTRON MICROSCOPY4.52903
204V5B|1|CBStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
212J28|1|BMODEL OF E. COLI SRP BOUND TO 70S RNCSELECTRON MICROSCOPY9.52841
224V4Q|1|DBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
234V4H|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
244V54|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
254V55|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
264V53|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
274V52|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
284V5Y|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452841
294V64|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
304V57|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
314V56|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
324V50|1|DBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
335KCR|1|1ACryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.62883
344YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12883
355J5B|1|DAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82886
365J91|1|DAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962886
375JC9|1|DAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032886
385J7L|1|DAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32886
395J8A|1|DAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12886
405IT8|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122886
415J88|1|DAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322886
424V6E|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712854
434V6D|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812854
444V7V|1|BACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292854
454V7S|1|BACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252854
464WWW|1|RACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12854
474V80|1|BACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.32854
484V6C|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192854
494V7T|1|BACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192854
504V7U|1|BACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12854
513J5L|1|AStructure of the E. coli 50S subunit with ErmBL nascent chainELECTRON MICROSCOPY6.62853
524WOI|1|CA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
534V9C|1|BAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
544V9D|1|DAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
554U1U|1|DACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
564U20|1|DACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
574U1V|1|DACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
584WF1|1|DACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
594U27|1|DACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
604U25|1|DACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
614U26|1|DACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
624U24|1|DACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
634YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12876
645J5B|1|CAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82876
655J91|1|CAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962876
665J8A|1|CAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12876
675J7L|1|CAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32875
685JC9|1|CAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032876
695IT8|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122876
705J88|1|CAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322876
714V7V|1|DACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292841
724V7S|1|DACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252841
734V80|1|DACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.32841
744WWW|1|YACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12841
754V7T|1|DACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192841
764V6C|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192841
774V7U|1|DACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12841
784V6E|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712841
794V6D|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812841
804V50|1|BBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
814V56|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
824V57|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
834V64|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
844V52|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
854V5Y|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452841
864V55|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
874V53|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
884V4H|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
894V4Q|1|BBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
904V54|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
914V5B|1|ABStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
924V85|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22853
934V89|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72853
944V9P|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
954V9O|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
964V9O|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
974V9P|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
983J7Z|1|AStructure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.92854
994UY8|1|AMolecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.82854
1004V9O|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1014V9P|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1024V9P|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1034V9O|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1043JCJ|1|AStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72854
1053J9Z|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
1064V69|1|BBTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72903
1073JCD|1|AStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72903
1083JCE|1|AStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22903
1095H5U|1|AMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.012902
1105JTE|1|BACryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.62897
1115JU8|1|BACryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.62897
1125NWY|1|N2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.92898
1136C4H|1|AConformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)ELECTRON MICROSCOPY3.1619
1146C4I|1|AConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.242882
1155MDV|1|1Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972881
1165MDZ|1|1Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.12881
1175MDW|1|1Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.062881
1185LZB|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)ELECTRON MICROSCOPY5.32879
1195LZC|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)ELECTRON MICROSCOPY4.82879
1205LZD|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.42879
1215LZA|1|AStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.62877
1225LZE|1|AStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.52876
1236BU8|1|0170S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.52903
1245U9G|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.22903
1255U9F|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.22903
1265UYK|1|0170S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.92903
1275UYL|1|0170S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.62903
1285UYN|1|0170S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY42903
1295UYP|1|0170S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.92903
1305UYQ|1|0170S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.82903
1315UYM|1|0170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.22903
1325KCS|1|1ACryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.92876
1335AFI|1|A2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92876
1343J9Y|1|ACryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92876
1355MGP|1|AStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.12900
1365O2R|1|ACryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.42900
1375WE6|1|A70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.42876
1385WDT|1|A70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY32876
1395WE4|1|A70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.12876
1405KPX|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.92903
1415KPS|1|28Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.92903
1425KPV|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)ELECTRON MICROSCOPY4.12903
1435KPW|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.92903
1445IQR|1|1Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32882
1455U4I|1|AStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.52887
1464V6T|1|BAStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.32903
1474V7B|1|BAVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.82854
1486ENJ|1|APolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.72871
1496ENU|1|APolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.12871
1506ENF|1|ACryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.22807
1514WOI|1|BA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
1524V9C|1|DAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
1534U24|1|BACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
1544U26|1|BACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
1554U25|1|BACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
1564U27|1|BACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
1574WF1|1|BACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
1584U1V|1|BACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
1594U20|1|BACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
1604U1U|1|BACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
1614V9D|1|CAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
1623JCN|1|AStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.62897
1634V7C|1|BAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.62897
1644V7D|1|AAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.62897
1655LZF|1|AStructure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)ELECTRON MICROSCOPY4.62876
1663JBV|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322903
1673JA1|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
1684V6Q|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.52880
1694V6R|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.52880
1704V6P|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.52880
1714V6O|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.72880
1724V6S|1|ABStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.12880
1734V6N|1|ABStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12880
1744CSU|1|BCryo-EM structures of the 50S ribosome subunit bound with ObgEELECTRON MICROSCOPY5.52903
1754V6Z|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY122903
1764V7A|1|BAE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY92903
1774V6Y|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY122903
1784V71|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY202903
1794V79|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY152903
1804V78|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY202903
1814V77|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY172903
1824V76|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY172903
1834V74|1|BA70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY172903
1844V73|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY152903
1854V72|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY132903
1864V70|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY172903
1874V75|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY122903
1884V66|1|BBStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92903
1894V65|1|BBStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92903
1903BBX|1|BThe Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexELECTRON MICROSCOPY102902
1914V4V|1|B0Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152740
1924V4W|1|B0Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152740
1933J8G|1|BElectron cryo-microscopy structure of EngA bound with the 50S ribosomal subunitELECTRON MICROSCOPY52874
1941C2W|1|B23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTIONELECTRON MICROSCOPY7.52891
1954V47|1|A0Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeELECTRON MICROSCOPY12.32536
1964V48|1|A0Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.52536
1972RDO|1|B50S subunit with EF-G(GDPNP) and RRF boundELECTRON MICROSCOPY9.12841