Equivalence class NR_all_83957.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8I3Z|1|B+ 8I3Z|1|A (rep) | RNA (5'-R(*AP*GP*AP*GP*CP*GP*UP*UP*GP*CP*GP*UP*CP*CP*GP*AP*AP*AP*GP*UP*(CBV)P*GP*CP*C)-3'), RNA (31-MER) | Streptococcus parasanguinis | Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom | X-ray diffraction | 1.67 | 2023-03-22 | |||
| 2 | 8HB1|1|B+ 8HB1|1|A | RNA (5'-R(*AP*GP*AP*GP*CP*GP*UP*UP*GP*CP*GP*UP*CP*CP*GP*AP*AP*AP*GP*UP*(CBV)P*GP*CP*C)-3'), RNA (30-MER) | Streptococcus parasanguinis | Crystal structure of NAD-II riboswitch (two strands) with NMN | X-ray diffraction | 2.23 | 2023-03-22 | |||
| 3 | 8HB3|1|B+ 8HB3|1|A | RNA (5'-R(*AP*GP*AP*GP*CP*GP*UP*UP*GP*CP*GP*UP*CP*CP*GP*AP*AP*AP*GP*UP*(CBV)P*GP*CP*C)-3'), RNA (31-MER) | Streptococcus parasanguinis | Crystal structure of NAD-II riboswitch (two strands) with NR | X-ray diffraction | 2.87 | 2023-03-22 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 8I3Z|1|B+8I3Z|1|A | Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom | X-RAY DIFFRACTION | 1.67 | 31 |
| 2 | 8HB1|1|B+8HB1|1|A | Crystal structure of NAD-II riboswitch (two strands) with NMN | X-RAY DIFFRACTION | 2.23 | 30 |
| 3 | 8HB3|1|B+8HB3|1|A | Crystal structure of NAD-II riboswitch (two strands) with NR | X-RAY DIFFRACTION | 2.87 | 31 |