Equivalence class NR_all_88517.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4JNG|1|L (rep) | RNA (42-MER) | Schmallenberg virus nucleoprotein-RNA complex | X-ray diffraction | 2.12 | 2013-07-31 | ||||
| 2 | 5UK4|1|x | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 3 | 5UK4|1|v | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 4 | 5UK4|1|w | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 5 | 5UK4|1|u | RNA (45-MER) | Vicugna pacos | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-ray diffraction | 3.2 | 2017-04-19 | |||
| 6 | 4BHH|1|R | POLY-URIDINE 45-MER | synthetic construct | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-ray diffraction | 3.4 | 2013-04-24 | |||
| 7 | 4J1G|1|E | RNA (45-MER) | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-ray diffraction | 2.79 | 2013-04-10 | ||||
| 8 | 3ZLA|1|I | RNA | Escherichia coli | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | |||
| 9 | 3ZLA|1|J | RNA | Escherichia coli | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-ray diffraction | 3.2 | 2013-05-01 | |||
| 10 | 3PU4|1|R | RNA (45-MER) | synthetic construct | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-ray diffraction | 3 | 2011-01-12 | |||
| 11 | 2GIC|1|R | 45-MER | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-ray diffraction | 2.92 | 2006-08-22 | ||||
| 12 | 3HHZ|1|R | RNA (45-MER) | Escherichia coli | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-ray diffraction | 3.5 | 2009-07-28 | |||
| 13 | 6BJY|1|R | RNA (45-MER) | Indiana vesiculovirus | VSV Nucleocapsid with Polyamide Bound | X-ray diffraction | 3.46 | 2018-02-28 | |||
| 14 | 5UKB|1|R | RNA (45-MER) | Escherichia coli | VSV N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1004 | X-ray diffraction | 5.47 | 2017-04-19 | |||
| 15 | 2WYY|1|S | POLY-URIDINE | Indiana vesiculovirus | CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS | Electron microscopy | 10.6 | 2010-02-16 | |||
| 16 | 2WYY|1|R | POLY-URIDINE | Indiana vesiculovirus | CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS | Electron microscopy | 10.6 | 2010-02-16 |
Release history
| Release | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-01 | 2018-03-08 | 2018-03-15 | 2018-03-22 | 2018-03-29 | 2018-04-06 | 2018-04-13 | 2018-04-20 | 2018-04-27 | 2018-05-04 | 2018-05-11 | 2018-05-18 | 2018-05-25 | 2018-06-01 | 2018-06-08 | 2018-06-15 | 2018-06-22 | 2018-06-29 | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 |
Parents
Children
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 2WYY|1|S | CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS | ELECTRON MICROSCOPY | 10.6 | 45 |
| 2 | 2WYY|1|R | CRYOEM MODEL OF THE VESICULAR STOMATITIS VIRUS | ELECTRON MICROSCOPY | 10.6 | 45 |
| 3 | 6BJY|1|R | VSV Nucleocapsid with Polyamide Bound | X-RAY DIFFRACTION | 3.46 | 45 |
| 4 | 5UKB|1|R | VSV N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1004 | X-RAY DIFFRACTION | 5.47 | 45 |
| 5 | 2GIC|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex | X-RAY DIFFRACTION | 2.92 | 45 |
| 6 | 3HHZ|1|R | Complex of the vesicular stomatitis virus nucleocapsid and the nucleocapsid-binding domain of the phosphoprotein | X-RAY DIFFRACTION | 3.5 | 45 |
| 7 | 3PU4|1|R | Crystal Structure of a vesicular stomatitis virus nucleocapsid-polyU complex | X-RAY DIFFRACTION | 3 | 45 |
| 8 | 5UK4|1|x | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 9 | 5UK4|1|w | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 10 | 5UK4|1|v | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 11 | 5UK4|1|u | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | X-RAY DIFFRACTION | 3.2 | 45 |
| 12 | 4JNG|1|L | Schmallenberg virus nucleoprotein-RNA complex | X-RAY DIFFRACTION | 2.12 | 42 |
| 13 | 3ZLA|1|J | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 |
| 14 | 3ZLA|1|I | Crystal structure of the nucleocapsid protein from Bunyamwera virus bound to RNA | X-RAY DIFFRACTION | 3.2 | 44 |
| 15 | 4J1G|1|E | Leanyer orthobunyavirus nucleoprotein-ssRNA complex | X-RAY DIFFRACTION | 2.79 | 45 |
| 16 | 4BHH|1|R | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | X-RAY DIFFRACTION | 3.4 | 44 |
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