BGSU RNA Site //

Equivalence class NR_all_90506.61 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
15TBW|1|1+ 5TBW|1|4 (rep)Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
25TBW|1|AR+ 5TBW|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
34V88|1|A5+ 4V88|1|A8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
44V88|1|A1+ 4V88|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
57OSA|1|25S+ 7OSA|1|58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
65I4L|1|5+ 5I4L|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
75I4L|1|1+ 5I4L|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
85MEI|1|AR+ 5MEI|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
95MEI|1|1+ 5MEI|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
106HHQ|1|AR+ 6HHQ|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
116HHQ|1|1+ 6HHQ|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
125OBM|1|5+ 5OBM|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
135OBM|1|1+ 5OBM|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
145LYB|1|5+ 5LYB|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmnSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
155NDV|1|1+ 5NDV|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
165ON6|1|1+ 5ON6|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
175LYB|1|1+ 5LYB|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmnSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
185ON6|1|AR+ 5ON6|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
197OSM|1|25S+ 7OSM|1|58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
205NDV|1|5+ 5NDV|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
215NDW|1|1+ 5NDW|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
225NDW|1|5+ 5NDW|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
235NDG|1|5+ 5NDG|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
245NDG|1|1+ 5NDG|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
255TGM|1|1+ 5TGM|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-PheSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
265TGM|1|5+ 5TGM|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-PheSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
274V7R|1|B1+ 4V7R|1|B3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome.X-ray diffraction42014-07-09
284V7R|1|D1+ 4V7R|1|D3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome.X-ray diffraction42014-07-09
295DAT|1|5+ 5DAT|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
305DGV|1|5+ 5DGV|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(8AN)*(Pro)*(Pro))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
315DAT|1|1+ 5DAT|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
325DGV|1|1+ 5DGV|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(8AN)*(Pro)*(Pro))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
335DGE|1|5+ 5DGE|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(NA))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
345TGA|1|5+ 5TGA|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
355DGF|1|5+ 5DGF|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
365TGA|1|1+ 5TGA|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
375DGF|1|1+ 5DGF|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
385DGE|1|1+ 5DGE|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(NA))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
395DC3|1|5+ 5DC3|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
405DC3|1|1+ 5DC3|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
417ZW0|1|LA+ 7ZW0|1|LDLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA (RDN25-1), 5.8S ribosomal RNA (RDN58-1)Saccharomyces cerevisiae W303EukaryaRF02543 + RF00002FAP-80S Complex - Rotated stateElectron microscopy2.42022-10-05
428AGX|1|f+ 8AGX|1|i25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast RQC complex in state with the RING domain of Ltn1 in the IN positionElectron microscopy2.42023-03-08
437TOP|1|A25S+ 7TOP|1|A58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.42022-05-25
448AAF|1|f+ 8AAF|1|i25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast RQC complex in state GElectron microscopy2.52023-03-08
457ZUX|1|5+ 7ZUX|1|325S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaCollided ribosome in a disome unit from S. cerevisiaeElectron microscopy2.52023-02-22
468HFR|1|1e+ 8HFR|1|3n25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiae S288CNPC-trapped pre-60S particleElectron microscopy2.642023-04-12
478AGZ|1|f+ 8AGZ|1|i25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast RQC complex in state with the RING domain of Ltn1 in the OUT positionElectron microscopy2.62023-03-08
488AGT|1|f+ 8AGT|1|i25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast RQC complex in state FElectron microscopy2.62023-03-08
498AGV|1|f+ 8AGV|1|i25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast RQC complex in state HElectron microscopy2.62023-03-08
508AGW|1|f+ 8AGW|1|i25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast RQC complex in state DElectron microscopy2.62023-03-08
517UOO|1|1+ 7UOO|1|225S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation stateElectron microscopy2.342023-03-15
527V08|1|1+ 7V08|1|225S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strainElectron microscopy2.362023-03-15
538AGU|1|f+ 8AGU|1|i25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast RQC complex in state EElectron microscopy2.72023-03-08
547UQB|1|1+ 7UQB|1|225S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4Electron microscopy2.432023-03-15
556T4Q|1|C1+ 6T4Q|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.Electron microscopy2.62019-12-25
567UQZ|1|1+ 7UQZ|1|225S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strainElectron microscopy2.442023-03-15
577TOO|1|A25S+ 7TOO|1|A58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.72022-05-25
587MPJ|1|A1+ 7MPJ|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Stm1 bound vacant 80S structure isolated from nop1-D243AElectron microscopy2.72022-05-11
596WOO|1|5+ 6WOO|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPElectron microscopy2.92020-09-23
606TB3|1|BQ+ 6TB3|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexElectron microscopy2.82020-04-22
616SNT|1|1+ 6SNT|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1), rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome stalled on SDD1 mRNA.Electron microscopy2.82020-03-04
627AZY|1|E+ 7AZY|1|GLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Context-specific inhibition of eukaryotic translation by macrolide antibioticsElectron microscopy2.8772021-05-19
634U4R|1|1+ 4U4R|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
644U4R|1|5+ 4U4R|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
658BIP|1|1+ 8BIP|1|C325S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaStructure of a yeast 80S ribosome-bound N-Acetyltransferase B complexElectron microscopy3.12023-02-08
667UG6|1|1+ 7UG6|1|225S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaCryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922Electron microscopy2.92022-12-21
674U3U|1|5+ 4U3U|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
684U3U|1|1+ 4U3U|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
697N8B|1|A1+ 7N8B|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cycloheximide bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
707MPI|1|A1+ 7MPI|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8 S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Stm1 bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
717ZS5|1|1+ 7ZS5|1|425S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaStructure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNAElectron microscopy3.22023-02-22
725T62|1|A+ 5T62|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S Ribosomal RNA, 5.8S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexElectron microscopy3.12017-02-08
734U3M|1|1+ 4U3M|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25s rRNA, 5.8s rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
746YLG|1|1+ 6YLG|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)Electron microscopy32020-07-29
754U4Q|1|5+ 4U4Q|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
764U3M|1|5+ 4U3M|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25s rRNA, 5.8s rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
774U4U|1|1+ 4U4U|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
784U4Q|1|1+ 4U4Q|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
794U4U|1|5+ 4U4U|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
804U52|1|5+ 4U52|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
814U52|1|1+ 4U52|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
827RR5|1|C1+ 7RR5|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of ribosomal complex bound with Rbg1/Tma46Electron microscopy3.232021-11-10
837U0H|1|1+ 7U0H|1|225S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall modelElectron microscopy2.762022-12-14
846Q8Y|1|BQ+ 6Q8Y|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexElectron microscopy3.12019-03-13
857OHQ|1|1+ 7OHQ|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population C from S. cerevisiaeElectron microscopy3.12021-11-03
866YLH|1|1+ 6YLH|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Rix1-Rea1 pre-60S particle - full composite structureElectron microscopy3.12020-07-29
874U6F|1|1+ 4U6F|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
886T7T|1|C1+ 6T7T|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast 80S ribosome stalled on poly(A) tract.Electron microscopy3.12019-12-25
894U6F|1|5+ 4U6F|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
906QIK|1|A+ 6QIK|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.12019-06-26
917B7D|1|LA+ 7B7D|1|LCLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsElectron microscopy3.32021-03-10
926XIR|1|1+ 6XIR|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA35S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressElectron microscopy3.22020-08-26
935M1J|1|14+ 5M1J|1|44Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Nonstop ribosomal complex bound with Dom34 and Hbs1Electron microscopy3.32017-01-18
944U4N|1|5+ 4U4N|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
956TNU|1|BQ+ 6TNU|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.Electron microscopy3.12020-04-22
964U4Z|1|5+ 4U4Z|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
974U4N|1|1+ 4U4N|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
984U4Z|1|1+ 4U4Z|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
996RZZ|1|A+ 6RZZ|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.22019-06-26
1006T7I|1|C1+ 6T7I|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.Electron microscopy3.22019-12-25
1017BT6|1|1+ 7BT6|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN5.8-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)Electron microscopy3.122020-10-28
1027BTB|1|1+ 7BTB|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN5.8-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)Electron microscopy3.222020-10-28
1034U3N|1|5+ 4U3N|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1044U4Y|1|5+ 4U4Y|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1053JCT|1|1+ 3JCT|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN58-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-em structure of eukaryotic pre-60S ribosomal subunitsElectron microscopy3.082016-06-01
1064U3N|1|1+ 4U3N|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1074U55|1|5+ 4U55|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1084U4Y|1|1+ 4U4Y|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1096S47|1|AA+ 6S47|1|ACLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1Electron microscopy3.282019-07-24
1104U51|1|5+ 4U51|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1114U51|1|1+ 4U51|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1124U55|1|1+ 4U55|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1134U50|1|5+ 4U50|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1146R87|1|1+ 6R87|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)Electron microscopy3.42019-06-26
1155H4P|1|1+ 5H4P|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1Electron microscopy3.072017-01-25
1166M62|1|1+ 6M62|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN58-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.Electron microscopy3.22020-08-26
1174U50|1|1+ 4U50|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1186Z6K|1|C1+ 6Z6K|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesElectron microscopy3.42020-07-29
1196Z6J|1|C1+ 6Z6J|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionElectron microscopy3.42020-07-29
1206R86|1|1+ 6R86|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast Vms1-60S ribosomal subunit complex (post-state)Electron microscopy3.42019-07-31
1216RI5|1|A+ 6RI5|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S RNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.32019-06-26
1227ZPQ|1|5+ 7ZPQ|1|325S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaStructure of the RQT-bound 80S ribosome from S. cerevisiae (C1)Electron microscopy3.472023-02-22
1237OF1|1|1+ 7OF1|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population A from S. cerevisiaeElectron microscopy3.12021-11-03
1245JUP|1|B+ 5JUP|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)Electron microscopy3.52016-10-05
1256HD7|1|1+ 6HD7|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of the ribosome-NatA complexElectron microscopy3.42018-12-19
1266QT0|1|A+ 6QT0|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.42019-06-26
1274U53|1|1+ 4U53|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
1286N8M|1|A+ 6N8M|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1296N8O|1|A+ 6N8O|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1307NAC|1|1+ 7NAC|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741RF02543 + RF00002State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite modelElectron microscopy3.042022-11-09
1314U53|1|5+ 4U53|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
1327OH3|1|1+ 7OH3|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population B from S. cerevisiaeElectron microscopy3.42021-11-03
1336SV4|1|YQ+ 6SV4|1|YSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1346SV4|1|BQ+ 6SV4|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1356SV4|1|ZQ+ 6SV4|1|ZSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1366R84|1|1+ 6R84|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)Electron microscopy3.62019-06-26
1377R7A|1|1+ 7R7A|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741RF02543 + RF00002State E1 nucleolar 60S ribosome biogenesis intermediate - Composite modelElectron microscopy3.042022-11-09
1387Z34|1|1+ 7Z34|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNA35S pre-ribosomal RNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Structure of pre-60S particle bound to DRG1(AFG2)Electron microscopy3.82022-09-21
1396N8L|1|1+ 6N8L|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunitElectron microscopy3.62019-03-13
1406N8K|1|1+ 6N8K|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunitElectron microscopy3.62019-03-13
1415APO|1|5+ 5APO|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1Electron microscopy3.412015-12-16
1428BJQ|1|1+ 8BJQ|1|C325S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaStructure of a yeast 80S ribosome-bound N-Acetyltransferase B complexElectron microscopy3.82023-02-08
1438BQX|1|BQ+ 8BQX|1|BS25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast 80S ribosome in complex with Map1 (conformation 2)Electron microscopy3.82023-03-22
1446QTZ|1|A+ 6QTZ|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.52019-06-26
1456N8J|1|1+ 6N8J|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1466OIG|1|5+ 6OIG|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Subunit joining exposes nascent pre-40S rRNA for processing and quality controlElectron microscopy3.82020-09-30
1474U56|1|1+ 4U56|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1484U56|1|5+ 4U56|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1498BQD|1|BQ+ 8BQD|1|BS25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaYeast 80S ribosome in complex with Map1 (conformation 1)Electron microscopy3.92023-03-22
1506N8N|1|A+ 6N8N|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunitElectron microscopy3.82019-03-13
1517NRC|1|LA+ 7NRC|1|LCLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA (3184-MER), 5.8S rRNA (158-MER)Saccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5AElectron microscopy3.92021-05-05
1525MC6|1|BQ+ 5MC6|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeElectron microscopy3.82017-01-18
1536GQB|1|1+ 6GQB|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)Electron microscopy3.92018-07-11
1545JUU|1|B+ 5JUU|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)Electron microscopy42016-10-05
1556T83|1|1b+ 6T83|1|3bLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast disome (di-ribosome) stalled on poly(A) tract.Electron microscopy42019-12-25
1565JUT|1|B+ 5JUT|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)Electron microscopy42016-10-05
1575JUO|1|B+ 5JUO|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)Electron microscopy42016-10-05
1586T83|1|Aa+ 6T83|1|CaLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast disome (di-ribosome) stalled on poly(A) tract.Electron microscopy42019-12-25
1596S05|1|A+ 6S05|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.92019-06-26
1606GQV|1|1+ 6GQV|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)Electron microscopy42018-07-11
1616FT6|1|1+ 6FT6|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 7S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsElectron microscopy3.92018-03-28
1625JUS|1|B+ 5JUS|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)Electron microscopy4.22016-10-05
1636ELZ|1|1+ 6ELZ|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesElectron microscopy3.32017-12-27
1646XIQ|1|1+ 6XIQ|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA35S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative StressElectron microscopy4.22020-08-26
1655APN|1|5+ 5APN|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1Electron microscopy3.912015-12-16
1665T6R|1|A+ 5T6R|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S Ribosomal RNA, 5.8S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 ComplexElectron microscopy4.22017-02-08
1676YLY|1|1+ 6YLY|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002pre-60S State NE2 (TAP-Flag-Nop53)Electron microscopy3.82020-07-29
1687ZUW|1|5+ 7ZUW|1|325S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaStructure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiaeElectron microscopy4.32023-02-22
1694U4O|1|5+ 4U4O|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
1704U4O|1|1+ 4U4O|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
1717NRD|1|LA+ 7NRD|1|LCLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA (3184-MER), 5.8S rRNA (158-MER)Saccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNAElectron microscopy4.362021-04-14
1724V8Y|1|B5+ 4V8Y|1|B8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexElectron microscopy4.32014-07-09
1736GQ1|1|1+ 6GQ1|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)Electron microscopy4.42018-07-11
1746YLX|1|1+ 6YLX|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002pre-60S State NE1 (TAP-Flag-Nop53)Electron microscopy3.92020-07-29
1755GAK|1|1+ 5GAK|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AElectron microscopy3.882016-02-24
1767ZRS|1|5+ 7ZRS|1|325S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaStructure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite mapElectron microscopy4.82023-02-22
1777OHX|1|1+ 7OHX|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population AElectron microscopy3.32021-11-03
1787OHV|1|1+ 7OHV|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population CElectron microscopy3.92021-11-03
1796EM1|1|1+ 6EM1|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesElectron microscopy3.62017-12-27
1806EM5|1|1Large subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesElectron microscopy4.32017-12-27
1816EM3|1|1Large subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesElectron microscopy3.22017-12-27
1827OHU|1|1+ 7OHU|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population BElectron microscopy3.72021-11-03
1837OHY|1|1+ 7OHY|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population BElectron microscopy3.92021-11-03
1847OHW|1|1+ 7OHW|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population BElectron microscopy3.52021-11-03
1857OHP|1|1+ 7OHP|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population AElectron microscopy3.92021-11-03
1867OHR|1|1+ 7OHR|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population E from S. cerevisiaeElectron microscopy4.722021-11-10
1876I7O|1|BQLarge subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.Electron microscopy5.32019-01-16
1886I7O|1|YQLarge subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.Electron microscopy5.32019-01-16
1896C0F|1|1+ 6C0F|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast nucleolar pre-60S ribosomal subunit (state 2)Electron microscopy3.72018-03-14
1906EM4|1|1Large subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesElectron microscopy4.12017-12-27
1917OHS|1|1+ 7OHS|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population F from S. cerevisiaeElectron microscopy4.382021-11-03
1923J6Y|1|2S+ 3J6Y|1|8SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)Electron microscopy6.12014-06-11
1933J6X|1|2S+ 3J6X|1|8SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)Electron microscopy6.12014-06-11
1943J77|1|2S+ 3J77|1|8SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)Electron microscopy6.22014-08-06
1953J78|1|2S+ 3J78|1|8SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)Electron microscopy6.32014-08-06
1967OHT|1|1Large subunit ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population AElectron microscopy4.72021-11-03
1978E5T|1|1+ 8E5T|1|225S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiae BY4741Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediateElectron microscopy42023-04-12
1986CB1|1|1+ 6CB1|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA35S pre-ribosomal RNA miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast nucleolar pre-60S ribosomal subunit (state 3)Electron microscopy4.62018-03-14
1995Z3G|1|A+ 5Z3G|1|BLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)Electron microscopy3.652018-04-11
2004V8Z|1|B5+ 4V8Z|1|B8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexElectron microscopy6.62014-07-09
2014V8T|1|5+ 4V8T|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1Electron microscopy8.12014-07-09
2024V7F|1|1Large subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543Arx1 pre-60S particle.Electron microscopy8.72014-07-09
2034V6I|1|DA+ 4V6I|1|DBLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosomeElectron microscopy8.82014-07-09
2045JCS|1|xLarge subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLEElectron microscopy9.52016-11-16

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V6I|1|DA+4V6I|1|DBLocalization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosomeELECTRON MICROSCOPY8.83354
26XIQ|1|1+6XIQ|1|4Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative StressELECTRON MICROSCOPY4.23223
34V7R|1|B1+4V7R|1|B3Yeast 80S ribosome.X-RAY DIFFRACTION43206
44V7R|1|D1+4V7R|1|D3Yeast 80S ribosome.X-RAY DIFFRACTION43206
56RI5|1|A+6RI5|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.33147
66QTZ|1|A+6QTZ|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.53146
76N8O|1|A+6N8O|1|CCryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunitELECTRON MICROSCOPY3.53201
86XIR|1|1+6XIR|1|4Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressELECTRON MICROSCOPY3.23113
96GQV|1|1+6GQV|1|4Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)ELECTRON MICROSCOPY43223
106GQB|1|1+6GQB|1|4Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)ELECTRON MICROSCOPY3.93223
116GQ1|1|1+6GQ1|1|4Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)ELECTRON MICROSCOPY4.43223
127OSA|1|25S+7OSA|1|58SPre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION33180
137OSM|1|25S+7OSM|1|58SIntermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION33162
143J77|1|2S+3J77|1|8SStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.23287
157TOP|1|A25S+7TOP|1|A58SYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.43194
167TOO|1|A25S+7TOO|1|A58SYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.73194
173J78|1|2S+3J78|1|8SStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.33302
186Z6K|1|C1+6Z6K|1|C3Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesELECTRON MICROSCOPY3.43127
196Z6J|1|C1+6Z6J|1|C3Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionELECTRON MICROSCOPY3.43127
203J6Y|1|2S+3J6Y|1|8SS. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)ELECTRON MICROSCOPY6.13308
213J6X|1|2S+3J6X|1|8SS. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)ELECTRON MICROSCOPY6.13308
225JUT|1|B+5JUT|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)ELECTRON MICROSCOPY43309
235JUU|1|B+5JUU|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)ELECTRON MICROSCOPY43307
245JUP|1|B+5JUP|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)ELECTRON MICROSCOPY3.53309
255JUS|1|B+5JUS|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)ELECTRON MICROSCOPY4.23309
265JUO|1|B+5JUO|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)ELECTRON MICROSCOPY43309
276WOO|1|5+6WOO|1|8CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPELECTRON MICROSCOPY2.93271
287N8B|1|A1+7N8B|1|A4Cycloheximide bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.053115
297MPI|1|A1+7MPI|1|A4Stm1 bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.053096
307MPJ|1|A1+7MPJ|1|A4Stm1 bound vacant 80S structure isolated from nop1-D243AELECTRON MICROSCOPY2.73067
316R86|1|1+6R86|1|4Yeast Vms1-60S ribosomal subunit complex (post-state)ELECTRON MICROSCOPY3.43260
327ZS5|1|1+7ZS5|1|4Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNAELECTRON MICROSCOPY3.23248
338AGW|1|f+8AGW|1|iYeast RQC complex in state DELECTRON MICROSCOPY2.63217
345H4P|1|1+5H4P|1|4Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1ELECTRON MICROSCOPY3.073091
355T6R|1|A+5T6R|1|CNmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 ComplexELECTRON MICROSCOPY4.23204
365T62|1|A+5T62|1|CNmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexELECTRON MICROSCOPY3.13200
376HD7|1|1+6HD7|1|4Cryo-EM structure of the ribosome-NatA complexELECTRON MICROSCOPY3.43335
385GAK|1|1+5GAK|1|4Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AELECTRON MICROSCOPY3.883165
395MC6|1|BQ+5MC6|1|BSCryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeELECTRON MICROSCOPY3.83165
406Q8Y|1|BQ+6Q8Y|1|BSCryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexELECTRON MICROSCOPY3.13161
417AZY|1|E+7AZY|1|GContext-specific inhibition of eukaryotic translation by macrolide antibioticsELECTRON MICROSCOPY2.8773161
428BQD|1|BQ+8BQD|1|BSYeast 80S ribosome in complex with Map1 (conformation 1)ELECTRON MICROSCOPY3.93299
436TNU|1|BQ+6TNU|1|BSYeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.ELECTRON MICROSCOPY3.13184
447NRC|1|LA+7NRC|1|LCStructure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5AELECTRON MICROSCOPY3.93184
458BQX|1|BQ+8BQX|1|BSYeast 80S ribosome in complex with Map1 (conformation 2)ELECTRON MICROSCOPY3.83301
467NRD|1|LA+7NRD|1|LCStructure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNAELECTRON MICROSCOPY4.363184
477ZW0|1|LA+7ZW0|1|LDFAP-80S Complex - Rotated stateELECTRON MICROSCOPY2.43217
487RR5|1|C1+7RR5|1|C3Structure of ribosomal complex bound with Rbg1/Tma46ELECTRON MICROSCOPY3.233221
498AGU|1|f+8AGU|1|iYeast RQC complex in state EELECTRON MICROSCOPY2.73216
508AGV|1|f+8AGV|1|iYeast RQC complex in state HELECTRON MICROSCOPY2.63217
518AAF|1|f+8AAF|1|iYeast RQC complex in state GELECTRON MICROSCOPY2.53217
528AGT|1|f+8AGT|1|iYeast RQC complex in state FELECTRON MICROSCOPY2.63217
538AGZ|1|f+8AGZ|1|iYeast RQC complex in state with the RING domain of Ltn1 in the OUT positionELECTRON MICROSCOPY2.63216
548AGX|1|f+8AGX|1|iYeast RQC complex in state with the RING domain of Ltn1 in the IN positionELECTRON MICROSCOPY2.43216
557ZUX|1|5+7ZUX|1|3Collided ribosome in a disome unit from S. cerevisiaeELECTRON MICROSCOPY2.53163
568BJQ|1|1+8BJQ|1|C3Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complexELECTRON MICROSCOPY3.83301
578BIP|1|1+8BIP|1|C3Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complexELECTRON MICROSCOPY3.13301
587ZRS|1|5+7ZRS|1|3Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite mapELECTRON MICROSCOPY4.83185
597ZPQ|1|5+7ZPQ|1|3Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)ELECTRON MICROSCOPY3.473184
607ZUW|1|5+7ZUW|1|3Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiaeELECTRON MICROSCOPY4.33163
616T83|1|1b+6T83|1|3bStructure of yeast disome (di-ribosome) stalled on poly(A) tract.ELECTRON MICROSCOPY43184
626TB3|1|BQ+6TB3|1|BSyeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexELECTRON MICROSCOPY2.83223
636T7I|1|C1+6T7I|1|C3Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.ELECTRON MICROSCOPY3.23184
646SNT|1|1+6SNT|1|3Yeast 80S ribosome stalled on SDD1 mRNA.ELECTRON MICROSCOPY2.83184
656T4Q|1|C1+6T4Q|1|C3Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.ELECTRON MICROSCOPY2.63184
666T7T|1|C1+6T7T|1|C3Structure of yeast 80S ribosome stalled on poly(A) tract.ELECTRON MICROSCOPY3.13184
675NDV|1|1+5NDV|1|4Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33078
687B7D|1|LA+7B7D|1|LCYeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsELECTRON MICROSCOPY3.33223
696S47|1|AA+6S47|1|ACSaccharomyces cerevisiae 80S ribosome bound with ABCF protein New1ELECTRON MICROSCOPY3.283149
705DAT|1|1+5DAT|1|4Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.153149
715DGF|1|1+5DGF|1|4Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.33149
725TGM|1|1+5TGM|1|4Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.53149
735DGV|1|1+5DGV|1|4Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.13148
745DGE|1|1+5DGE|1|4Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.453149
755DC3|1|1+5DC3|1|4Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.253149
765TBW|1|1+5TBW|1|4Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
774U4Y|1|1+4U4Y|1|4Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
784U3M|1|1+4U3M|1|4Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
794U56|1|1+4U56|1|4Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.453149
804U4Z|1|1+4U4Z|1|4Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
816HHQ|1|1+6HHQ|1|4Crystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
825TGA|1|1+5TGA|1|4Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.33151
835I4L|1|1+5I4L|1|4Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
844U4N|1|1+4U4N|1|4Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
854U55|1|1+4U55|1|4Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
864U3N|1|1+4U3N|1|4Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
875LYB|1|1+5LYB|1|4Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.253149
884V88|1|A1+4V88|1|A4The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION33149
894U4R|1|1+4U4R|1|4Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.83149
904U3U|1|1+4U3U|1|4Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.93149
914U6F|1|1+4U6F|1|4Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
924U4Q|1|1+4U4Q|1|4Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
934U4U|1|1+4U4U|1|4Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
944U51|1|1+4U51|1|4Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
954U53|1|1+4U53|1|4Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33149
964U50|1|1+4U50|1|4Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
974U52|1|1+4U52|1|4Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
985ON6|1|1+5ON6|1|4Crystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.13149
995MEI|1|1+5MEI|1|4Crystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.53149
1004U4O|1|1+4U4O|1|4Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.63149
1015OBM|1|1+5OBM|1|4Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.43100
1025NDG|1|1+5NDG|1|4Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73078
1035NDW|1|1+5NDW|1|4Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73090
1046HHQ|1|AR+6HHQ|1|ATCrystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13147
1055MEI|1|AR+5MEI|1|ATCrystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.53149
1065ON6|1|AR+5ON6|1|ATCrystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.13149
1075TBW|1|AR+5TBW|1|ATCrystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
1085OBM|1|5+5OBM|1|8Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.43134
1094U4O|1|5+4U4O|1|8Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.63150
1104U4Y|1|5+4U4Y|1|8Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
1114U56|1|5+4U56|1|8Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.453150
1124U55|1|5+4U55|1|8Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
1134U4Z|1|5+4U4Z|1|8Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
1144U3N|1|5+4U3N|1|8Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23151
1154U3U|1|5+4U3U|1|8Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.93150
1164U4R|1|5+4U4R|1|8Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.83150
1174V88|1|A5+4V88|1|A8The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION33150
1184V8T|1|5+4V8T|1|8Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1ELECTRON MICROSCOPY8.13150
1195LYB|1|5+5LYB|1|8Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.253150
1204U4N|1|5+4U4N|1|8Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
1215I4L|1|5+5I4L|1|8Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
1225TGA|1|5+5TGA|1|8Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.33152
1234U6F|1|5+4U6F|1|8Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
1244U3M|1|5+4U3M|1|8Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
1254U4Q|1|5+4U4Q|1|8Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
1264U4U|1|5+4U4U|1|8Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
1274U51|1|5+4U51|1|8Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
1284U53|1|5+4U53|1|8Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33150
1294U50|1|5+4U50|1|8Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
1304U52|1|5+4U52|1|8Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
1315TGM|1|5+5TGM|1|8Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.53150
1325DGV|1|5+5DGV|1|8Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.13149
1335DGE|1|5+5DGE|1|8Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.453150
1345DC3|1|5+5DC3|1|8Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.253169
1355DAT|1|5+5DAT|1|8Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.153169
1365DGF|1|5+5DGF|1|8Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.33169
1375NDV|1|5+5NDV|1|8Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33087
1386SV4|1|ZQ+6SV4|1|ZSThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.33127
1396SV4|1|YQ+6SV4|1|YSThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.33127
1406I7O|1|YQThe structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.ELECTRON MICROSCOPY5.33127
1416SV4|1|BQ+6SV4|1|BSThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.33127
1426I7O|1|BQThe structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.ELECTRON MICROSCOPY5.33127
1436T83|1|Aa+6T83|1|CaStructure of yeast disome (di-ribosome) stalled on poly(A) tract.ELECTRON MICROSCOPY43127
1445NDG|1|5+5NDG|1|8Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73127
1455NDW|1|5+5NDW|1|8Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73080
1464V8Z|1|B5+4V8Z|1|B8Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY6.63147
1474V8Y|1|B5+4V8Y|1|B8Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY4.33147
1486OIG|1|5+6OIG|1|8Subunit joining exposes nascent pre-40S rRNA for processing and quality controlELECTRON MICROSCOPY3.83243
1495M1J|1|14+5M1J|1|44Nonstop ribosomal complex bound with Dom34 and Hbs1ELECTRON MICROSCOPY3.33295
1506QT0|1|A+6QT0|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.43164
1516R87|1|1+6R87|1|4Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)ELECTRON MICROSCOPY3.43316
1526R84|1|1+6R84|1|4Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)ELECTRON MICROSCOPY3.63316
1535APN|1|5+5APN|1|8Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1ELECTRON MICROSCOPY3.913092
1545APO|1|5+5APO|1|8Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1ELECTRON MICROSCOPY3.413092
1556RZZ|1|A+6RZZ|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.23146
1566QIK|1|A+6QIK|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.13146
1576S05|1|A+6S05|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.93146
1586N8N|1|A+6N8N|1|CCryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunitELECTRON MICROSCOPY3.83203
1596N8M|1|A+6N8M|1|CCryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunitELECTRON MICROSCOPY3.53203
1606N8L|1|1+6N8L|1|3Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunitELECTRON MICROSCOPY3.63201
1617Z34|1|1+7Z34|1|3Structure of pre-60S particle bound to DRG1(AFG2)ELECTRON MICROSCOPY3.83347
1626N8K|1|1+6N8K|1|3Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunitELECTRON MICROSCOPY3.63201
1638HFR|1|1e+8HFR|1|3nNPC-trapped pre-60S particleELECTRON MICROSCOPY2.643274
1646N8J|1|1+6N8J|1|3Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunitELECTRON MICROSCOPY3.53047
1656YLY|1|1+6YLY|1|3pre-60S State NE2 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.82676
1666YLG|1|1+6YLG|1|2Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)ELECTRON MICROSCOPY33039
1676YLH|1|1+6YLH|1|2Rix1-Rea1 pre-60S particle - full composite structureELECTRON MICROSCOPY3.13039
1685JCS|1|xCRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLEELECTRON MICROSCOPY9.53394
1697OF1|1|1+7OF1|1|2Nog1-TAP associated immature ribosomal particle population A from S. cerevisiaeELECTRON MICROSCOPY3.12787
1707UOO|1|1+7UOO|1|2Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation stateELECTRON MICROSCOPY2.342935
1717UQZ|1|1+7UQZ|1|2Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strainELECTRON MICROSCOPY2.442933
1727V08|1|1+7V08|1|2Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strainELECTRON MICROSCOPY2.362933
1737UQB|1|1+7UQB|1|2Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4ELECTRON MICROSCOPY2.432936
1747UG6|1|1+7UG6|1|2Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922ELECTRON MICROSCOPY2.93058
1757OHQ|1|1+7OHQ|1|2Nog1-TAP associated immature ribosomal particle population C from S. cerevisiaeELECTRON MICROSCOPY3.13053
1767OH3|1|1+7OH3|1|2Nog1-TAP associated immature ribosomal particle population B from S. cerevisiaeELECTRON MICROSCOPY3.43013
1776FT6|1|1+6FT6|1|2Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsELECTRON MICROSCOPY3.93058
1783JCT|1|1+3JCT|1|2Cryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.083058
1797BTB|1|1+7BTB|1|2Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)ELECTRON MICROSCOPY3.223058
1806M62|1|1+6M62|1|2Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.ELECTRON MICROSCOPY3.22972
1817BT6|1|1+7BT6|1|2Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)ELECTRON MICROSCOPY3.122962
1826YLX|1|1+6YLX|1|2pre-60S State NE1 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.92534
1837U0H|1|1+7U0H|1|2State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall modelELECTRON MICROSCOPY2.762722
1847OHV|1|1+7OHV|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population CELECTRON MICROSCOPY3.92141
1857NAC|1|1+7NAC|1|2State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite modelELECTRON MICROSCOPY3.042657
1867R7A|1|1+7R7A|1|2State E1 nucleolar 60S ribosome biogenesis intermediate - Composite modelELECTRON MICROSCOPY3.042571
1877OHR|1|1+7OHR|1|2Nog1-TAP associated immature ribosomal particle population E from S. cerevisiaeELECTRON MICROSCOPY4.722373
1886ELZ|1|1+6ELZ|1|2State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesELECTRON MICROSCOPY3.32457
1895Z3G|1|A+5Z3G|1|BCryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)ELECTRON MICROSCOPY3.651501
1906EM1|1|1+6EM1|1|2State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY3.61785
1917OHS|1|1+7OHS|1|2Nog1-TAP associated immature ribosomal particle population F from S. cerevisiaeELECTRON MICROSCOPY4.381697
1927OHW|1|1+7OHW|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population BELECTRON MICROSCOPY3.51639
1937OHX|1|1+7OHX|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population AELECTRON MICROSCOPY3.31561
1946CB1|1|1+6CB1|1|2Yeast nucleolar pre-60S ribosomal subunit (state 3)ELECTRON MICROSCOPY4.61370
1956C0F|1|1+6C0F|1|2Yeast nucleolar pre-60S ribosomal subunit (state 2)ELECTRON MICROSCOPY3.71357
1967OHP|1|1+7OHP|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population AELECTRON MICROSCOPY3.91567
1977OHU|1|1+7OHU|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population BELECTRON MICROSCOPY3.71692
1987OHY|1|1+7OHY|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population BELECTRON MICROSCOPY3.91689
1997OHT|1|1Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population AELECTRON MICROSCOPY4.71485
2008E5T|1|1+8E5T|1|2Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediateELECTRON MICROSCOPY4743
2016EM3|1|1State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY3.21250
2024V7F|1|1Arx1 pre-60S particle.ELECTRON MICROSCOPY8.73394
2036EM5|1|1State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY4.32438
2046EM4|1|1State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY4.11556