Equivalence class NR_all_90840.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3A3A|1|A (rep) | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | Crystal structure of human selenocystine tRNA | X-ray diffraction | 3.1 | 2009-08-11 |
| 2 | 4RQF|1|C | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | human Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsec | X-ray diffraction | 3.5 | 2015-11-04 |
| 3 | 4RQE|1|B | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsec | X-ray diffraction | 4 | 2015-11-04 |
| 4 | 4RQE|1|D | Selenocysteine transfer RNA | selenocysteine tRNA | Homo sapiens | Eukarya | RF01852 | human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsec | X-ray diffraction | 4 | 2015-11-04 |
| 5 | 3HL2|1|E | Selenocysteine transfer RNA | tRNASec | Homo sapiens | Eukarya | RF01852 | The crystal structure of the human SepSecS-tRNASec complex | X-ray diffraction | 2.81 | 2009-10-06 |
Release history
| Release | 2.48 | 2.49 | 2.50 | 2.51 | 2.52 | 2.53 | 2.54 | 2.55 | 2.56 | 2.57 | 2.58 | 2.59 | 2.60 | 2.61 | 2.62 | 2.63 | 2.64 | 2.65 | 2.66 | 2.67 | 2.68 | 2.69 | 2.70 | 2.71 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2015-11-06 | 2015-11-13 | 2015-11-20 | 2015-11-27 | 2015-12-04 | 2015-12-11 | 2015-12-18 | 2015-12-25 | 2016-01-01 | 2016-01-08 | 2016-01-15 | 2016-01-22 | 2016-01-29 | 2016-02-05 | 2016-02-12 | 2016-02-19 | 2016-02-26 | 2016-03-04 | 2016-03-11 | 2016-03-18 | 2016-03-25 | 2016-04-01 | 2016-04-08 | 2016-04-15 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_90840.1 | NR_20.0_90840.2 | 2.72 | (5) 3HL2|1|E, 4RQE|1|D, 3A3A|1|A, 4RQE|1|B, 4RQF|1|C | (0) | (2) 4ZDP|1|E, 4ZDO|1|E |
| NR_all_90840.1 | NR_3.0_90840.2 | 2.72 | (1) 3HL2|1|E | (4) 4RQE|1|B, 3A3A|1|A, 4RQF|1|C, 4RQE|1|D | (2) 4ZDO|1|E, 4ZDP|1|E |
| NR_all_90840.1 | NR_3.5_90840.2 | 2.72 | (3) 3HL2|1|E, 4RQF|1|C, 3A3A|1|A | (2) 4RQE|1|D, 4RQE|1|B | (2) 4ZDO|1|E, 4ZDP|1|E |
| NR_all_90840.1 | NR_4.0_90840.2 | 2.72 | (5) 3A3A|1|A, 4RQE|1|B, 4RQF|1|C, 3HL2|1|E, 4RQE|1|D | (0) | (2) 4ZDP|1|E, 4ZDO|1|E |
| NR_all_90840.1 | NR_all_90840.2 | 2.72 | (5) 3HL2|1|E, 4RQE|1|D, 3A3A|1|A, 4RQE|1|B, 4RQF|1|C | (0) | (2) 4ZDP|1|E, 4ZDO|1|E |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4RQE|1|D | human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsec | X-RAY DIFFRACTION | 4 | 83 |
| 2 | 4RQE|1|B | human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsec | X-RAY DIFFRACTION | 4 | 84 |
| 3 | 4RQF|1|C | human Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsec | X-RAY DIFFRACTION | 3.5 | 63 |
| 4 | 3A3A|1|A | Crystal structure of human selenocystine tRNA | X-RAY DIFFRACTION | 3.1 | 86 |
| 5 | 3HL2|1|E | The crystal structure of the human SepSecS-tRNASec complex | X-RAY DIFFRACTION | 2.81 | 164 |