Equivalence class NR_all_93855.9 Obsolete
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 6ZM6|1|AA (rep) | 12S mitochondrial rRNA | Homo sapiens | Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA | ELECTRON MICROSCOPY | 2.59 | 2021-01-13 |
| 2 | 7PNX|1|A | 12S mitochondrial rRNA | Homo sapiens | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a | ELECTRON MICROSCOPY | 2.76 | 2022-06-15 |
| 3 | 6ZM5|1|AA | 12S mitochondrial rRNA | Homo sapiens | Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide | ELECTRON MICROSCOPY | 2.89 | 2021-01-13 |
| 4 | 6VMI|1|AA | 12s rRNA | Homo sapiens | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII) | ELECTRON MICROSCOPY | 2.96 | 2020-08-05 |
| 5 | 7PO3|1|A | 12S mitochondrial rRNA | Homo sapiens | Human mitochondrial ribosome small subunit | ELECTRON MICROSCOPY | 2.92 | 2022-06-15 |
| 6 | 7PO1|1|A | 12S mitochondrial rRNA | Homo sapiens | Initiation complex of human mitochondrial ribosome small subunit with IF3 | ELECTRON MICROSCOPY | 2.92 | 2022-06-15 |
| 7 | 7PO0|1|A | 12S mitochondrial rRNA | Homo sapiens | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3 | ELECTRON MICROSCOPY | 2.9 | 2022-06-15 |
| 8 | 6VLZ|1|AA | 12s rRNA | Homo sapiens | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) | ELECTRON MICROSCOPY | 2.97 | 2020-08-05 |
| 9 | 6RW4|1|A | 12S mitochondrial rRNA | Homo sapiens | Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3 | ELECTRON MICROSCOPY | 2.97 | 2020-06-03 |
| 10 | 7PO2|1|A | 12S mitochondrial rRNA | Homo sapiens | Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA | ELECTRON MICROSCOPY | 3.09 | 2022-06-15 |
| 11 | 7PNY|1|A | 12S mitochondrial rRNA | Homo sapiens | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b | ELECTRON MICROSCOPY | 3.06 | 2022-06-15 |
| 12 | 7PNZ|1|A | 12S mitochondrial rRNA | Homo sapiens | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c | ELECTRON MICROSCOPY | 3.09 | 2022-06-15 |
| 13 | 6RW5|1|A | 12S mitochondrial rRNA | Homo sapiens | Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3 | ELECTRON MICROSCOPY | 3.14 | 2020-06-03 |
| 14 | 7L08|1|AA | 12S rRNA | Homo sapiens | Cryo-EM structure of the human 55S mitoribosome-RRFmt complex. | ELECTRON MICROSCOPY | 3.49 | 2021-05-12 |
| 15 | 7A5I|1|A6 | 12S rRNA | Homo sapiens | Structure of the human mitoribosome with A- P-and E-site mt-tRNAs | ELECTRON MICROSCOPY | 3.7 | 2020-12-23 |
| 16 | 7A5K|1|A6 | 12S rRNA | Homo sapiens | Structure of the human mitoribosome in the post translocation state bound to mtEF-G1 | ELECTRON MICROSCOPY | 3.7 | 2020-12-23 |
| 17 | 6ZSC|1|AA | 12S rRNA | Homo sapiens | Human mitochondrial ribosome in complex with E-site tRNA | ELECTRON MICROSCOPY | 3.5 | 2020-09-16 |
| 18 | 6ZSD|1|AA | 12SrRNA | Homo sapiens | Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 3.7 | 2020-09-16 |
| 19 | 3J9M|1|AA | 12S rRNA | Homo sapiens | Structure of the human mitochondrial ribosome (class 1) | ELECTRON MICROSCOPY | 3.5 | 2015-04-15 |
| 20 | 7OG4|1|AA | 12S mitochondrial rRNA | Homo sapiens | Human mitochondrial ribosome in complex with P/E-tRNA | ELECTRON MICROSCOPY | 3.8 | 2021-06-23 |
| 21 | 6ZSA|1|AA | 12S rRNA | Homo sapiens | Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA | ELECTRON MICROSCOPY | 4 | 2020-10-21 |
| 22 | 6ZSG|1|AA | 12S rRNA | Homo sapiens | Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 4 | 2020-10-14 |
| 23 | 6ZS9|1|AA | 12S rRNA | Homo sapiens | Human mitochondrial ribosome in complex with ribosome recycling factor | ELECTRON MICROSCOPY | 4 | 2020-10-14 |
| 24 | 7A5G|1|A6 | 12S rRNA | Homo sapiens | Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA | ELECTRON MICROSCOPY | 4.33 | 2020-12-23 |
| 25 | 6NU2|1|AA | 12S rRNA | Homo sapiens | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 3.9 | 2019-04-17 |
| 26 | 7A5F|1|A6 | 12S rRNA | Homo sapiens | Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs | ELECTRON MICROSCOPY | 4.4 | 2020-12-23 |
| 27 | 6ZSB|1|AA | 12S rRNA | Homo sapiens | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | ELECTRON MICROSCOPY | 4.5 | 2020-09-16 |
| 28 | 6NU3|1|AA | 12S rRNA | Homo sapiens | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 4.4 | 2019-04-17 |
| 29 | 6ZSE|1|AA | 12S rRNA | Homo sapiens | Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA | ELECTRON MICROSCOPY | 5 | 2020-09-16 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_93855.9 | NR_all_93855.8 | 3.235 | (22) 7L08|1|AA, 6ZSA|1|AA, 6NU2|1|AA, 6ZSG|1|AA, 6VMI|1|AA, 7A5K|1|A6, 6VLZ|1|AA, 6ZSE|1|AA, 3J9M|1|AA, 6ZS9|1|AA, 7A5I|1|A6, 6RW5|1|A, 6ZSD|1|AA, 6ZM6|1|AA, 7A5G|1|A6, 6RW4|1|A, 6ZSC|1|AA, 7OG4|1|AA, 6ZM5|1|AA, 7A5F|1|A6, 6NU3|1|AA, 6ZSB|1|AA | (7) 7PNX|1|A, 7PO3|1|A, 7PO2|1|A, 7PO0|1|A, 7PNZ|1|A, 7PO1|1|A, 7PNY|1|A | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_93855.9 | NR_all_93855.10 | 3.239 | (29) 6VMI|1|AA, 7PNX|1|A, 6VLZ|1|AA, 7OG4|1|AA, 6RW5|1|A, 7L08|1|AA, 6RW4|1|A, 7A5K|1|A6, 6NU3|1|AA, 7A5I|1|A6, 6NU2|1|AA, 7A5G|1|A6, 3J9M|1|AA, 7A5F|1|A6, 6ZSG|1|AA, 6ZSE|1|AA, 6ZSD|1|AA, 6ZSC|1|AA, 7PO3|1|A, 6ZSB|1|AA, 7PO2|1|A, 6ZSA|1|AA, 7PO1|1|A, 6ZS9|1|AA, 7PO0|1|A, 6ZM6|1|AA, 7PNZ|1|A, 6ZM5|1|AA, 7PNY|1|A | (0) | (1) 7QI4|1|AA |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6NU3|1|AA | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 4.4 | 923 |
| 2 | 6NU2|1|AA | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 3.9 | 923 |
| 3 | 6VLZ|1|AA | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) | ELECTRON MICROSCOPY | 2.97 | 944 |
| 4 | 6VMI|1|AA | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII) | ELECTRON MICROSCOPY | 2.96 | 944 |
| 5 | 7L08|1|AA | Cryo-EM structure of the human 55S mitoribosome-RRFmt complex. | ELECTRON MICROSCOPY | 3.49 | 944 |
| 6 | 3J9M|1|AA | Structure of the human mitochondrial ribosome (class 1) | ELECTRON MICROSCOPY | 3.5 | 923 |
| 7 | 7A5I|1|A6 | Structure of the human mitoribosome with A- P-and E-site mt-tRNAs | ELECTRON MICROSCOPY | 3.7 | 928 |
| 8 | 7A5G|1|A6 | Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA | ELECTRON MICROSCOPY | 4.33 | 928 |
| 9 | 7A5F|1|A6 | Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs | ELECTRON MICROSCOPY | 4.4 | 928 |
| 10 | 7A5K|1|A6 | Structure of the human mitoribosome in the post translocation state bound to mtEF-G1 | ELECTRON MICROSCOPY | 3.7 | 928 |
| 11 | 6ZSE|1|AA | Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA | ELECTRON MICROSCOPY | 5 | 927 |
| 12 | 6ZS9|1|AA | Human mitochondrial ribosome in complex with ribosome recycling factor | ELECTRON MICROSCOPY | 4 | 927 |
| 13 | 6ZSC|1|AA | Human mitochondrial ribosome in complex with E-site tRNA | ELECTRON MICROSCOPY | 3.5 | 927 |
| 14 | 7OG4|1|AA | Human mitochondrial ribosome in complex with P/E-tRNA | ELECTRON MICROSCOPY | 3.8 | 924 |
| 15 | 6ZSB|1|AA | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | ELECTRON MICROSCOPY | 4.5 | 927 |
| 16 | 6ZSD|1|AA | Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 3.7 | 927 |
| 17 | 6ZSA|1|AA | Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA | ELECTRON MICROSCOPY | 4 | 927 |
| 18 | 6ZSG|1|AA | Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 4 | 927 |
| 19 | 6ZM5|1|AA | Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide | ELECTRON MICROSCOPY | 2.89 | 954 |
| 20 | 6ZM6|1|AA | Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA | ELECTRON MICROSCOPY | 2.59 | 954 |
| 21 | 7PO2|1|A | Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA | ELECTRON MICROSCOPY | 3.09 | 950 |
| 22 | 7PO3|1|A | Human mitochondrial ribosome small subunit | ELECTRON MICROSCOPY | 2.92 | 950 |
| 23 | 7PO1|1|A | Initiation complex of human mitochondrial ribosome small subunit with IF3 | ELECTRON MICROSCOPY | 2.92 | 950 |
| 24 | 6RW5|1|A | Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3 | ELECTRON MICROSCOPY | 3.14 | 950 |
| 25 | 6RW4|1|A | Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3 | ELECTRON MICROSCOPY | 2.97 | 950 |
| 26 | 7PNZ|1|A | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c | ELECTRON MICROSCOPY | 3.09 | 946 |
| 27 | 7PO0|1|A | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3 | ELECTRON MICROSCOPY | 2.9 | 946 |
| 28 | 7PNX|1|A | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a | ELECTRON MICROSCOPY | 2.76 | 946 |
| 29 | 7PNY|1|A | Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b | ELECTRON MICROSCOPY | 3.06 | 946 |