1F7F Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1F7F_001 | 1/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_002 | 2/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_003 | 3/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_004 | 4/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_005 | 5/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_006 | 6/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_007 | 7/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_008 | 8/A/12:17 | No text annotation Not in a motif group | ||
| HL_1F7F_009 | 9/A/12:17 | No text annotation Not in a motif group |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1F7F_001 | 1/A/5:7, 1/A/22:23 | No text annotation Not in a motif group | ||
| IL_1F7F_002 | 2/A/5:7, 2/A/22:23 | No text annotation Not in a motif group | ||
| IL_1F7F_003 | 3/A/5:7, 3/A/22:23 | Multiple bulged bases Not in a motif group | geometric IL_5WLH_001 IL_44546.1 | |
| IL_1F7F_004 | 4/A/5:7, 4/A/22:23 | No text annotation Not in a motif group | ||
| IL_1F7F_005 | 5/A/5:7, 5/A/22:23 | No text annotation Not in a motif group | ||
| IL_1F7F_007 | 6/A/5:7, 6/A/22:23 | No text annotation Not in a motif group | ||
| IL_1F7F_008 | 7/A/5:7, 7/A/22:23 | Multiple bulged bases Not in a motif group | geometric IL_5W1H_001 IL_44546.1 | |
| IL_1F7F_009 | 8/A/5:7, 8/A/22:23 | No text annotation Not in a motif group | ||
| IL_1F7F_010 | 9/A/5:7, 9/A/22:23 | No text annotation Not in a motif group |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1F7F_006 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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