3J2G Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/N/12:22 | NA | NA | ||
| 1/N/82:87 | NA | NA | ||
| 1/N/158:163 | NA | NA | ||
| 1/N/186:191 | NA | NA | ||
| 1/N/207:212 | NA | NA | ||
| 1/N/258:268 | NA | NA | ||
| 1/N/296:301 | NA | NA | ||
| 1/N/320:333 | NA | NA | ||
| 1/N/342:347 | NA | NA | ||
| 1/N/379:384 | NA | NA | ||
| 1/N/419:424 | NA | NA | ||
| 1/N/459:473 | NA | NA | ||
| 1/N/522:527 | NA | NA | ||
| 1/N/617:623 | NA | NA | ||
| 1/N/689:698 | NA | NA | ||
| 1/N/726:731 | NA | NA | ||
| 1/N/786:796 | NA | NA | ||
| 1/N/840:846 | NA | NA | ||
| 1/N/862:867 | NA | NA | ||
| 1/N/897:902 | NA | NA | ||
| 1/N/963:972 | NA | NA | ||
| 1/N/1012:1017 | NA | NA | ||
| 1/N/1028:1033 | NA | NA | ||
| 1/N/1076:1081 | NA | NA | ||
| 1/N/1089:1096 | NA | NA | ||
| 1/N/1134:1140 | NA | NA | ||
| 1/N/1165:1171 | NA | NA | ||
| 1/N/1265:1270 | NA | NA | ||
| 1/N/1314:1323 | NA | NA | ||
| 1/N/1356:1366 | NA | NA | ||
| 1/N/1449:1454 | NA | NA | ||
| 1/N/1515:1520 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/N/30:32, 1/N/552:553 | NA | NA | ||
| 1/N/43:45, 1/N/396:399 | NA | NA | ||
| 1/N/47:52, 1/N/359:361 | NA | NA | ||
| 1/N/54:56, 1/N/356:357 | NA | NA | ||
| 1/N/61:63, 1/N/104:106 | NA | NA | ||
| 1/N/63:66, 1/N/103:104 | NA | NA | ||
| 1/N/67:69, 1/N/99:102 | NA | NA | ||
| 1/N/70:73, 1/N/97:98 | NA | NA | ||
| 1/N/75:82, 1/N/87:95 | NA | NA | ||
| 1/N/128:136, 1/N/227:233 | NA | NA | ||
| 1/N/144:146, 1/N/176:178 | NA | NA | ||
| 1/N/147:153, 1/N/168:175 | NA | NA | ||
| 1/N/200:202, 1/N/215:217 | NA | NA | ||
| 1/N/202:207, 1/N/212:215 | NA | NA | ||
| 1/N/242:247, 1/N/277:284 | NA | NA | ||
| 1/N/249:253, 1/N/273:275 | NA | NA | ||
| 1/N/292:293, 1/N/304:308 | NA | NA | ||
| 1/N/293:295, 1/N/302:304 | NA | NA | ||
| 1/N/367:369, 1/N/392:393 | NA | NA | ||
| 1/N/370:375, 1/N/389:391 | NA | NA | ||
| 1/N/375:376, 1/N/387:389 | NA | NA | ||
| 1/N/409:416, 1/N/427:433 | NA | NA | ||
| 1/N/440:442, 1/N/492:497 | NA | NA | ||
| 1/N/446:450, 1/N/483:488 | NA | NA | ||
| 1/N/450:455, 1/N/477:483 | NA | NA | ||
| 1/N/457:459, 1/N/473:475 | NA | NA | ||
| 1/N/504:511, 1/N/540:541 | NA | NA | ||
| 1/N/515:521, 1/N/528:536 | NA | NA | ||
| 1/N/568:575, 1/N/880:882 | NA | NA | ||
| 1/N/580:584, 1/N/757:761 | NA | NA | ||
| 1/N/594:596, 1/N/644:645 | NA | NA | ||
| 1/N/597:598, 1/N/640:643 | NA | NA | ||
| 1/N/605:612, 1/N/628:633 | NA | NA | ||
| 1/N/654:655, 1/N/751:754 | NA | NA | ||
| 1/N/658:659, 1/N/746:748 | NA | NA | ||
| 1/N/662:666, 1/N/740:743 | NA | NA | ||
| 1/N/684:688, 1/N/699:706 | NA | NA | ||
| 1/N/773:783, 1/N/799:806 | NA | NA | ||
| 1/N/831:833, 1/N/853:855 | NA | NA | ||
| 1/N/887:894, 1/N/905:910 | NA | NA | ||
| 1/N/921:924, 1/N/1392:1396 | NA | NA | ||
| 1/N/924:927, 1/N/1390:1392 | NA | NA | ||
| 1/N/933:935, 1/N/1380:1384 | NA | NA | ||
| 1/N/941:943, 1/N/1340:1342 | NA | NA | ||
| 1/N/948:950, 1/N/1231:1233 | NA | NA | ||
| 1/N/953:954, 1/N/1226:1228 | NA | NA | ||
| 1/N/993:997, 1/N/1044:1045 | NA | NA | ||
| 1/N/998:999, 1/N/1041:1043 | NA | NA | ||
| 1/N/1048:1050, 1/N/1208:1209 | NA | NA | ||
| 1/N/1052:1056, 1/N/1204:1206 | NA | NA | ||
| 1/N/1057:1058, 1/N/1199:1203 | NA | NA | ||
| 1/N/1060:1061, 1/N/1195:1197 | NA | NA | ||
| 1/N/1124:1128, 1/N/1144:1149 | NA | NA | ||
| 1/N/1129:1132, 1/N/1142:1143 | NA | NA | ||
| 1/N/1158:1162, 1/N/1174:1181 | NA | NA | ||
| 1/N/1246:1253, 1/N/1284:1291 | NA | NA | ||
| 1/N/1255:1258, 1/N/1277:1282 | NA | NA | ||
| 1/N/1259:1263, 1/N/1272:1276 | NA | NA | ||
| 1/N/1303:1308, 1/N/1329:1334 | NA | NA | ||
| 1/N/1399:1401, 1/N/1501:1504 | NA | NA | ||
| 1/N/1401:1404, 1/N/1497:1501 | NA | NA | ||
| 1/N/1405:1407, 1/N/1494:1496 | NA | NA | ||
| 1/N/1407:1409, 1/N/1491:1494 | NA | NA | ||
| 1/N/1412:1415, 1/N/1485:1488 | NA | NA | ||
| 1/N/1416:1419, 1/N/1481:1484 | NA | NA | ||
| 1/N/1430:1435, 1/N/1466:1470 | NA | NA | ||
| 1/N/1435:1439, 1/N/1462:1466 | NA | NA | ||
| 1/N/1440:1442, 1/N/1460:1461 | NA | NA | ||
| 1/N/1445:1449, 1/N/1454:1457 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3J2G_022 | NA | ||
| IL_3J2G_027 | NA | ||
| IL_3J2G_033 | NA | ||
| IL_3J2G_036 | NA | ||
| IL_3J2G_039 | NA | ||
| IL_3J2G_041 | NA | ||
| IL_3J2G_055 | NA | ||
| IL_3J2G_060 | NA | ||
| IL_3J2G_061 | NA | ||
| IL_3J2G_068 | NA | ||
| IL_3J2G_070 | NA | ||
| IL_3J2G_077 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/N/585:588, 1/N/651:654, 1/N/754:756 | NA | NA | ||
| 1/N/826:829, 1/N/857:861, 1/N/868:874 | NA | NA | ||
| 1/N/936:939, 1/N/1344:1350, 1/N/1372:1379 | NA | NA | ||
| 1/N/954:963, 1/N/972:984, 1/N/1221:1226 | NA | NA | ||
| 1/N/990:993, 1/N/1045:1047, 1/N/1210:1215 | NA | NA | ||
| 1/N/1003:1006, 1/N/1023:1027, 1/N/1034:1037 | NA | NA | ||
| 1/N/1061:1068, 1/N/1107:1114, 1/N/1186:1195 | NA | NA | ||
| 1/N/1116:1118, 1/N/1155:1158, 1/N/1181:1184 | NA | NA |
Problematic loops
No problematic loops
Coloring options: