Valid loops

#loop idlocationmotif
11/AA/30:32,1/AA/552:553NA
21/AA/44:45,1/AA/396:398NA
31/AA/47:52,1/AA/359:361NA
41/AA/54:56,1/AA/356:357NA
51/AA/63:66,1/AA/103:104NA
61/AA/67:69,1/AA/100:102NA
71/AA/129:131,1/AA/231:232NA
81/AA/132:136,1/AA/227:230NA
91/AA/148:153,1/AA/168:174NA
101/AA/186:188,1/AA/189L:191NA
111/AA/242:247,1/AA/277:284NA
121/AA/249:253,1/AA/273:275NA
131/AA/292:293,1/AA/304:308NA
141/AA/367:369,1/AA/392:393NA
151/AA/371:375,1/AA/389:390NA
161/AA/375:376,1/AA/387:389NA
171/AA/409:416,1/AA/427:433NA
181/AA/446:450,1/AA/483:488NA
191/AA/450:456,1/AA/475:483NA
201/AA/504:511,1/AA/540:541NA
211/AA/515:521,1/AA/528:536NA
221/AA/569:575,1/AA/880:881NA
231/AA/580:584,1/AA/757:761NA
241/AA/594:596,1/AA/644:645NA
251/AA/597:598,1/AA/640:643NA
261/AA/605:612,1/AA/628:633NA
271/AA/654:655,1/AA/751:754NA
281/AA/657:658,1/AA/747:749NA
291/AA/662:666,1/AA/740:743NA
301/AA/673:678,1/AA/712:717NA
311/AA/683:688,1/AA/699:707NA
321/AA/774:778,1/AA/804:805NA
331/AA/779:783,1/AA/799:803NA
341/AA/887:894,1/AA/905:910NA
351/AA/922:923,1/AA/1393:1395NA
361/AA/925:927,1/AA/1390:1391NA
371/AA/933:935,1/AA/1380:1384NA
381/AA/952:954,1/AA/1226:1229NA
391/AA/993:997,1/AA/1044:1045NA
401/AA/1048:1050,1/AA/1208:1209NA
411/AA/1052:1056,1/AA/1204:1206NA
421/AA/1057:1058,1/AA/1199:1203NA
431/AA/1060:1061,1/AA/1195:1197NA
441/AA/1061:1063,1/AA/1193:1195NA
451/AA/1124:1127,1/AA/1145:1149NA
461/AA/1247:1253,1/AA/1284:1290NA
471/AA/1255:1259,1/AA/1276:1282NA
481/AA/1259:1262,1/AA/1273:1276NA
491/AA/1303:1308,1/AA/1329:1334NA
501/AA/1399:1401,1/AA/1501:1504NA
511/AA/1401:1404,1/AA/1497:1501NA
521/AA/1405:1407,1/AA/1494:1496NA
531/AA/1407:1409,1/AA/1491:1494NA
541/AA/1412:1414,1/AA/1486:1488NA
551/AA/1416:1419,1/AA/1481:1484NA
561/AA/1431:1435,1/AA/1466:1469NA
571/AA/1435:1437,1/AA/1464:1466NA
581/AA/1440:1443,1/AA/1459:1461NA
591/BA/24:30,1/BA/510:516NA
601/BA/36:37,1/BA/442:444NA
611/BA/41:44,1/BA/433:437NA
621/BA/81:85,1/BA/97:105NA
631/BA/183:184,1/BA/212:214NA
641/BA/188:194,1/BA/201:208NA
651/BA/239:245,1/BA/253:258NA
661/BA/272D:272F,1/BA/363D:364NA
671/BA/280:284,1/BA/357:360NA
681/BA/288:290,1/BA/350:353NA
691/BA/293:295,1/BA/343:347NA
701/BA/481:484,1/BA/496:509NA
711/BA/564:566,1/BA/575:577NA
721/BA/606:610,1/BA/618:622NA
731/BA/672:674,1/BA/806:808NA
741/BA/674:678,1/BA/799:806NA
751/BA/697:698,1/BA/763:765NA
761/BA/702:703,1/BA/728:730NA
771/BA/703:707,1/BA/724:728NA
781/BA/738:741,1/BA/756:758NA
791/BA/775:777,1/BA/787:791NA
801/BA/837:838,1/BA/940:942NA
811/BA/844:846,1/BA/931:934NA
821/BA/846:850,1/BA/927:931NA
831/BA/858:862,1/BA/915:919NA
841/BA/862:863,1/BA/913:915NA
851/BA/864:868,1/BA/909:912NA
861/BA/870:872,1/BA/905:907NA
871/BA/875:879,1/BA/898:902NA
881/BA/880:881,1/BA/895:897NA
891/BA/952:954,1/BA/963:965NA
901/BA/994:996,1/BA/1159:1160NA
911/BA/998:1002,1/BA/1153:1157NA
921/BA/1004:1011,1/BA/1150:1151NA
931/BA/1011:1013,1/BA/1149:1150NA
941/BA/1018:1024,1/BA/1140:1144NA
951/BA/1024:1030,1/BA/1124:1140NA
961/BA/1031:1034,1/BA/1121:1123NA
971/BA/1043:1054,1/BA/1105:1112NA
981/BA/1196:1198,1/BA/1247:1250NA
991/BA/1202:1206,1/BA/1240:1243NA
1001/BA/1208:1215,1/BA/1234:1238NA
1011/BA/1219:1221,1/BA/1229:1230NA
1021/BA/1262:1269,1/BA/2011:2017NA
1031/BA/1310:1313,1/BA/1603:1604NA
1041/BA/1319:1323,1/BA/1331:1333NA
1051/BA/1351:1355,1/BA/1376:1380NA
1061/BA/1357:1361,1/BA/1370:1374NA
1071/BA/1415:1417,1/BA/1581:1587NA
1081/BA/1417:1421,1/BA/1577:1581NA
1091/BA/1433:1435,1/BA/1557:1560NA
1101/BA/1437:1440,1/BA/1551:1555NA
1111/BA/1448:1450,1/BA/1462:1463NA
1121/BA/1469:1473,1/BA/1518:1523NA
1131/BA/1481:1482,1/BA/1506:1510NA
1141/BA/1489:1491,1/BA/1499:1500NA
1151/BA/1526:1530,1/BA/1539:1546NA
1161/BA/1651:1656,1/BA/2004:2006NA
1171/BA/1686:1691,1/BA/1696:1702NA
1181/BA/1770:1771,1/BA/1980:1982NA
1191/BA/1798:1804,1/BA/1813:1821NA
1201/BA/1837:1840,1/BA/1902:1903NA
1211/BA/1841:1842,1/BA/1898:1901NA
1221/BA/1846:1849,1/BA/1893:1894NA
1231/BA/1851:1855,1/BA/1887:1891NA
1241/BA/1856:1860,1/BA/1882:1886NA
1251/BA/1933:1934,1/BA/1964:1967NA
1261/BA/1934:1945,1/BA/1961:1964NA
1271/BA/2050:2052,1/BA/2617:2618NA
1281/BA/2054:2057,1/BA/2611:2615NA
1291/BA/2067:2069,1/BA/2442:2443NA
1301/BA/2070:2071,1/BA/2438:2441NA
1311/BA/2081:2083,1/BA/2236:2239NA
1321/BA/2085:2087,1/BA/2232:2234NA
1331/BA/2108:2110,1/BA/2179:2181NA
1341/BA/2110:2120,1/BA/2178:2179NA
1351/BA/2124:2127,1/BA/2161:2174NA
1361/BA/2129:2137,1/BA/2154:2159NA
1371/BA/2297:2299,1/BA/2317:2321NA
1381/BA/2350:2353,1/BA/2364:2367NA
1391/BA/2401:2403,1/BA/2414:2415NA
1401/BA/2453:2454,1/BA/2498:2500NA
1411/BA/2454:2455,1/BA/2496:2498NA
1421/BA/2457:2459,1/BA/2493:2494NA
1431/BA/2459:2461,1/BA/2489:2493NA
1441/BA/2466:2470,1/BA/2480:2484NA
1451/BA/2507:2508,1/BA/2580:2582NA
1461/BA/2510:2512,1/BA/2574:2578NA
1471/BA/2512:2513,1/BA/2571:2574NA
1481/BA/2522:2523,1/BA/2540:2543NA
1491/BA/2591:2592,1/BA/2601:2603NA
1501/BA/2636:2640,1/BA/2774:2782NA
1511/BA/2652:2658,1/BA/2663:2668NA
1521/BA/2680:2684,1/BA/2725:2727NA
1531/BA/2687:2691,1/BA/2718:2722NA
1541/BA/2695:2696,1/BA/2711:2714NA
1551/BA/2737:2742,1/BA/2762:2767NA
1561/BA/2838:2839,1/BA/2878:2880NA
1571/BA/2843:2846,1/BA/2870:2874NA
1581/BA/2847:2852,1/BA/2865:2869NA
1591/BB/17:18,1/BB/65:67NA
1601/BB/20:23,1/BB/60:63NA
1611/BB/23:28,1/BB/56:60NA
1621/BB/30:32,1/BB/50:54NA
1631/BB/34:38,1/BB/44:48NA
1641/BB/71:79,1/BB/98:106NA

Problematic loops

#loop idProblemSequence
1272, 272, 272, 274, 275, 276, 277, 278, 279, 280, 360, 361, 362, 363, 363, 363
21059, 1060, 1061, 1062, 1063, 1075, 1076, 1077, 1078, 1079
31087, 1088, 1089, 1090, 1091, 1100, 1101, 1102

Valid loops

#loop idlocationmotif
11/AA/12:22NA
21/AA/158:163NA
31/AA/189C:189HNA
41/AA/201:216NA
51/AA/259:267NA
61/AA/296:301NA
71/AA/320:333NA
81/AA/379:384NA
91/AA/419:424NA
101/AA/458:473NA
111/AA/522:527NA
121/AA/617:623NA
131/AA/689:698NA
141/AA/726:731NA
151/AA/786:796NA
161/AA/838:848NA
171/AA/862:867NA
181/AA/897:902NA
191/AA/963:972NA
201/AA/1012:1017NA
211/AA/1076:1081NA
221/AA/1089:1096NA
231/AA/1129:1143NA
241/AA/1165:1171NA
251/AA/1265:1270NA
261/AA/1314:1323NA
271/AA/1356:1366NA
281/AA/1444:1458NA
291/AA/1515:1520NA
301/AV/13:22NA
311/AV/31:39NA
321/AV/53:61NA
331/BA/59:68NA
341/BA/87:95NA
351/BA/123:128NA
361/BA/139:142ANA
371/BA/194:201NA
381/BA/225:230NA
391/BA/246:252NA
401/BA/271H:271PNA
411/BA/305:312NA
421/BA/319:323NA
431/BA/327:335NA
441/BA/382:392NA
451/BA/410:417NA
461/BA/462:467NA
471/BA/487:493NA
481/BA/566:575NA
491/BA/612:615NA
501/BA/629:634NA
511/BA/641:647NA
521/BA/712:719NA
531/BA/744:753NA
541/BA/779:785NA
551/BA/826:831NA
561/BA/884:892NA
571/BA/955:962NA
581/BA/977:986NA
591/BA/1171:1178NA
601/BA/1222:1227NA
611/BA/1281:1289NA
621/BA/1324:1330NA
631/BA/1363:1368NA
641/BA/1389:1398NA
651/BA/1450A:1461NA
661/BA/1492:1498NA
671/BA/1565:1568NA
681/BA/1612:1619NA
691/BA/1631:1635NA
701/BA/1691:1696NA
711/BA/1720:1742NA
721/BA/1752:1756NA
731/BA/1777:1787NA
741/BA/1806:1811NA
751/BA/1864:1878NA
761/BA/1910:1920NA
771/BA/1949:1957NA
781/BA/1992:1996NA
791/BA/2027:2036NA
801/BA/2143:2148NA
811/BA/2205:2219NA
821/BA/2248:2256NA
831/BA/2264:2276NA
841/BA/2303:2313NA
851/BA/2324:2331NA
861/BA/2355:2362NA
871/BA/2374:2379NA
881/BA/2404:2413NA
891/BA/2471:2479NA
901/BA/2528:2535NA
911/BA/2551:2557NA
921/BA/2594:2599NA
931/BA/2658:2663NA
941/BA/2701:2706NA
951/BA/2745:2759NA
961/BA/2819:2827NA
971/BA/2856:2861NA
981/BB/38:44NA
991/BB/86:91NA

Problematic loops

#loop idProblemSequence
176, 77, 78, 79, 80, 81, 82, 83, 84, 88, 89, 90, 91, 92, 93
2342, 343, 344, 345, 346, 347
3154, 155, 156, 157, 158, 171
4543, 544, 545, 547, 548, 549
51064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074
61092, 1093, 1094, 1095, 1096, 1097, 1098, 1099
71532, 1533, 1534, 1535, 1536, 1537
82792, 2793, 2794, 2795, 2796, 2799, 2801, 2801, 2802, 2803, 2804

Valid loops

#loop idlocationmotif
11/AA/46:47,1/AA/361:367,1/AA/393:395NA
21/AA/586:588,1/AA/651:654,1/AA/754:755NA
31/AA/672:673,1/AA/717:725,1/AA/732:734NA
41/AA/826:829,1/AA/857:861,1/AA/868:874NA
51/AA/936:939,1/AA/1344:1350,1/AA/1372:1379NA
61/AA/943:946,1/AA/1235:1237,1/AA/1337:1340NA
71/AA/955:962,1/AA/973:984,1/AA/1221:1225NA
81/AA/990:993,1/AA/1045:1047,1/AA/1210:1215NA
91/AA/1063:1068,1/AA/1107:1113,1/AA/1187:1193NA
101/AA/1073:1074,1/AA/1083:1087,1/AA/1098:1102NA
111/AA/1116:1118,1/AA/1155:1161,1/AA/1175:1184NA
121/AA/1237:1241,1/AA/1296:1303,1/AA/1334:1337NA
131/BA/30:31,1/BA/474:481,1/BA/509:510NA
141/BA/56:57,1/BA/70:76,1/BA/110:114NA
151/BA/269:271B,1/BA/271V:272B,1/BA/366:370NA
161/BA/683:689,1/BA/773:775,1/BA/791:794NA
171/BA/698:700,1/BA/732:736,1/BA/760:763NA
181/BA/1298:1303,1/BA/1625:1627,1/BA/1639:1642NA
191/BA/1306:1309,1/BA/1605:1612,1/BA/1619:1622NA
201/BA/1344:1350,1/BA/1381:1385,1/BA/1402:1403NA
211/BA/1663:1674,1/BA/1990:1992,1/BA/1996:1997NA
221/BA/2091:2093,1/BA/2196:2200,1/BA/2223:2228NA
231/BA/2295:2297,1/BA/2321:2323,1/BA/2332:2337NA
241/BA/2517:2520,1/BA/2545:2547,1/BA/2561:2567NA
251/BA/2814:2815,1/BA/2831:2836,1/BA/2882:2886NA
261/BB/11:16,1/BB/68:69,1/BB/108:110NA

Problematic loops

#loop idProblemSequence
11055, 1056, 1057, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1102, 1103, 1104

Coloring options: