Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V6F_0011/AA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4V6F_0021/AA/87:95No text annotation
Not in a motif group
geometric
HL_2Y8W_001
HL_01057.1
HL_4V6F_0031/AA/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4V6F_0041/AA/137A:141ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_4V6F_0051/AA/155:171No text annotation
Not in a motif group
HL_4V6F_0061/AA/194:201No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_06192.2
HL_4V6F_0071/AA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4V6F_0081/AA/246:252No text annotation
Not in a motif group
homologous
HL_5J7L_141
HL_67216.7
HL_4V6F_0091/AA/270K:270NNo text annotation
Not in a motif group
HL_4V6F_0101/AA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V6F_0111/AA/319:323No text annotation
Not in a motif group
homologous
HL_5J7L_143
HL_75407.1
HL_4V6F_0121/AA/327:335No text annotation
Not in a motif group
homologous
HL_5J7L_144
HL_08002.8
HL_4V6F_0131/AA/383:391No text annotation
Not in a motif group
HL_4V6F_0141/AA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V6F_0151/AA/462:467GNRA
Not in a motif group
homologous
HL_5J7L_147
HL_42097.1
HL_4V6F_0161/AA/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_4V6F_0171/AA/544:549GNRA
Not in a motif group
geometric
HL_6DVK_001
HL_42097.1
HL_4V6F_0181/AA/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_4V6F_0191/AA/611:617No text annotation
Not in a motif group
homologous
HL_7A0S_019
HL_32369.1
HL_4V6F_0201/AA/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_4V6F_0211/AA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.1
HL_4V6F_0231/AA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V6F_0241/AA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V6F_0251/AA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4V6F_0261/AA/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_4V6F_0271/AA/884:892No text annotation
Not in a motif group
HL_4V6F_0281/AA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.1
HL_4V6F_0291/AA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V6F_0301/AA/1064:1074No text annotation
Not in a motif group
homologous
HL_5J7L_161
HL_07145.1
HL_4V6F_0311/AA/1092:1099No text annotation
Not in a motif group
geometric
HL_5J7L_151
HL_90617.2
HL_4V6F_0321/AA/1171:1178No text annotation
Not in a motif group
HL_4V6F_0331/AA/1223:1228No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_4V6F_0341/AA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V6F_0351/AA/1324:1330No text annotation
Not in a motif group
homologous
HL_4WF9_033
HL_46680.1
HL_4V6F_0361/AA/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V6F_0371/AA/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4V6F_0381/AA/1451:1459No text annotation
Not in a motif group
geometric
HL_7RQB_037
HL_32426.1
HL_4V6F_0391/AA/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4V6F_0401/AA/1533:1538No text annotation
Not in a motif group
geometric
HL_4V88_198
HL_56691.2
HL_4V6F_0411/AA/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.2
HL_4V6F_0421/AA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4V6F_0431/AA/1630A:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4V6F_0441/AA/1691:1696UNCG
Not in a motif group
geometric
HL_4V9F_044
HL_03562.2
HL_4V6F_0451/AA/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4V6F_0461/AA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V6F_0471/AA/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4V6F_0481/AA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_4V6F_0491/AA/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_4V6F_0501/AA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V6F_0511/AA/1949:1957No text annotation
Not in a motif group
homologous
HL_7A0S_048
HL_51824.1
HL_4V6F_0521/AA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V6F_0531/AA/2143:2148UNCG
Not in a motif group
homologous
HL_3U4M_001
HL_03562.2
HL_4V6F_0541/AA/2209:2215No text annotation
Not in a motif group
HL_4V6F_0551/AA/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4V6F_0561/AA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V6F_0571/AA/2304:2312No text annotation
Not in a motif group
HL_4V6F_0581/AA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V6F_0591/AA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V6F_0601/AA/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_4V6F_0611/AA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V6F_0621/AA/2471:2479No text annotation
Not in a motif group
homologous
HL_7RQB_060
HL_06192.2
HL_4V6F_0631/AA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_88526.2
HL_4V6F_0641/AA/2551:2557No text annotation
Not in a motif group
homologous
HL_7RQB_062
NA
HL_4V6F_0651/AA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_4V6F_0661/AA/2658:2663No text annotation
Not in a motif group
homologous
HL_7A0S_063
HL_42097.1
HL_4V6F_0671/AA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V6F_0681/AA/2745:2759No text annotation
Not in a motif group
homologous
HL_7A0S_065
HL_56677.7
HL_4V6F_0701/AA/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4V6F_0711/AA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_4V6F_0721/AB/38:44No text annotation
Not in a motif group
geometric
HL_5TBW_006
HL_98984.2
HL_4V6F_0731/AB/86:90No text annotation
Not in a motif group
geometric
HL_5TBW_006
HL_98984.2
HL_4V6F_0741/BA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V6F_0751/BA/82:87No text annotation
Not in a motif group
HL_4V6F_0761/BA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.1
HL_4V6F_0771/BA/186F:191ANo text annotation
Not in a motif group
homologous
HL_4LFB_004
HL_10278.1
HL_4V6F_0781/BA/201:216No text annotation
Not in a motif group
HL_4V6F_0791/BA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V6F_0801/BA/296:301GNRA
Not in a motif group
homologous
HL_5J7L_007
HL_42097.1
HL_4V6F_0811/BA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V6F_0821/BA/342:347UNCG
Not in a motif group
homologous
HL_5J7L_009
HL_03562.2
HL_4V6F_0831/BA/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.1
HL_4V6F_0841/BA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V6F_0851/BA/458:474No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4V6F_0861/BA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4V6F_0871/BA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4V6F_0881/BA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V6F_0891/BA/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4V6F_0901/BA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V6F_0911/BA/838:848No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_38927.2
HL_4V6F_0921/BA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_4V6F_0931/BA/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.1
HL_4V6F_0941/BA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V6F_0951/BA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_4V6F_0961/BA/1028B:1032ANo text annotation
Not in a motif group
HL_4V6F_0971/BA/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.1
HL_4V6F_0981/BA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4V6F_0991/BA/1134:1140No text annotation
Not in a motif group
homologous
HL_4LFB_026
HL_03562.2
HL_4V6F_1001/BA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_4V6F_1011/BA/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.1
HL_4V6F_1021/BA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V6F_1031/BA/1356:1366No text annotation
Not in a motif group
HL_4V6F_1041/BA/1449:1454No text annotation
Not in a motif group
geometric
HL_4TUW_002
HL_65572.2
HL_4V6F_1051/BA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V6F_1061/BB/13:22No text annotation
Not in a motif group
homologous
HL_3KFU_004
NA
HL_4V6F_1071/BB/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4YCO_002
HL_53597.2
HL_4V6F_1081/BB/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5HR6_003
HL_22280.1
HL_4V6F_1091/BC/13:22No text annotation
Not in a motif group
homologous
HL_6PMO_003
NA
HL_4V6F_1101/BC/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4TUE_034
HL_53597.2
HL_4V6F_1111/BC/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4V90_034
HL_22280.1
HL_4V6F_1121/BD/13:22No text annotation
Not in a motif group
homologous
HL_4V9K_033
HL_98984.2
HL_4V6F_1131/BD/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4V90_033
HL_53597.2
HL_4V6F_1141/BD/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_1QU2_003
HL_71309.1
HL_4V6F_1151/CA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V6F_1171/CA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.1
HL_4V6F_1181/CA/186F:191ANo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4V6F_1191/CA/201:216No text annotation
Not in a motif group
homologous
HL_4LFB_005
HL_56691.2
HL_4V6F_1201/CA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V6F_1211/CA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.1
HL_4V6F_1221/CA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V6F_1231/CA/342:347No text annotation
Not in a motif group
homologous
HL_6CZR_080
HL_03562.2
HL_4V6F_1241/CA/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.1
HL_4V6F_1251/CA/419:424No text annotation
Not in a motif group
homologous
HL_6CZR_082
HL_03562.2
HL_4V6F_1261/CA/458:474No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4V6F_1271/CA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4V6F_1281/CA/617:623No text annotation
Not in a motif group
homologous
HL_5J7L_014
HL_26881.1
HL_4V6F_1291/CA/689:698No text annotation
Not in a motif group
homologous
HL_5J7L_015
HL_12326.1
HL_4V6F_1301/CA/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4V6F_1311/CA/786:796No text annotation
Not in a motif group
homologous
HL_6CZR_088
HL_12326.1
HL_4V6F_1321/CA/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_4V6F_1331/CA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.1
HL_4V6F_1341/CA/897:902GNRA
Not in a motif group
homologous
HL_4LFB_020
HL_42097.1
HL_4V6F_1351/CA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V6F_1361/CA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.1
HL_4V6F_1371/CA/1028B:1032ANo text annotation
Not in a motif group
HL_4V6F_1381/CA/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.1
HL_4V6F_1391/CA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4V6F_1401/CA/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4V6F_1411/CA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.1
HL_4V6F_1421/CA/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.1
HL_4V6F_1431/CA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V6F_1441/CA/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_4V6F_1451/CA/1449:1454No text annotation
Not in a motif group
geometric
HL_2Y9H_003
HL_16173.1
HL_4V6F_1461/CA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V6F_1471/CB/13:22No text annotation
Not in a motif group
homologous
HL_3KFU_004
NA
HL_4V6F_1481/CB/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4YCO_002
HL_53597.2
HL_4V6F_1491/CB/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5WWT_002
HL_22280.1
HL_4V6F_1501/CC/13:22No text annotation
Not in a motif group
homologous
HL_6PMO_003
NA
HL_4V6F_1511/CC/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_4TUE_034
HL_53597.2
HL_4V6F_1521/CC/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5AH5_008
HL_22280.1
HL_4V6F_1531/CD/13:22No text annotation
Not in a motif group
homologous
HL_6ORD_035
HL_14843.1
HL_4V6F_1541/CD/31:39tRNA anticodon loop
Not in a motif group
homologous
HL_6UFG_007
HL_53597.2
HL_4V6F_1551/CD/53:61T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5B63_004
HL_22280.1
HL_4V6F_1561/DA/67:74No text annotation
Not in a motif group
homologous
HL_4WF9_001
HL_86769.3
HL_4V6F_1571/DA/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4V6F_1581/DA/123:128No text annotation
Not in a motif group
homologous
HL_4WF9_003
HL_75407.1
HL_4V6F_1591/DA/137A:141ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.2
HL_4V6F_1611/DA/194:201No text annotation
Not in a motif group
homologous
HL_7RQB_006
HL_06192.2
HL_4V6F_1621/DA/225:230No text annotation
Not in a motif group
HL_4V6F_1631/DA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4V6F_1641/DA/270K:270NNo text annotation
Not in a motif group
homologous
HL_7RQB_009
HL_89098.1
HL_4V6F_1651/DA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V6F_1661/DA/319:323No text annotation
Not in a motif group
homologous
HL_7A0S_011
HL_75407.1
HL_4V6F_1671/DA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.8
HL_4V6F_1681/DA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4V6F_1691/DA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V6F_1701/DA/462:467GNRA
Not in a motif group
homologous
HL_5J7L_147
HL_42097.1
HL_4V6F_1711/DA/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.1
HL_4V6F_1721/DA/544:549GNRA
Not in a motif group
geometric
HL_4LFB_007
HL_42097.1
HL_4V6F_1731/DA/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_4V6F_1741/DA/611:617No text annotation
Not in a motif group
homologous
HL_7A0S_019
HL_32369.1
HL_4V6F_1751/DA/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.1
HL_4V6F_1761/DA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.1
HL_4V6F_1781/DA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V6F_1791/DA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V6F_1801/DA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4V6F_1811/DA/826:831No text annotation
Not in a motif group
homologous
HL_5J7L_157
HL_64365.1
HL_4V6F_1821/DA/884:892No text annotation
Not in a motif group
HL_4V6F_1831/DA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.1
HL_4V6F_1841/DA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V6F_1851/DA/1064:1074No text annotation
Not in a motif group
homologous
HL_5J7L_161
HL_07145.1
HL_4V6F_1861/DA/1082:1086No text annotation
Not in a motif group
HL_4V6F_1871/DA/1092:1099No text annotation
Not in a motif group
HL_4V6F_1881/DA/1171:1178No text annotation
Not in a motif group
geometric
HL_2Y8Y_001
HL_20062.1
HL_4V6F_1891/DA/1223:1228No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.1
HL_4V6F_1901/DA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V6F_1911/DA/1324:1330No text annotation
Not in a motif group
homologous
HL_7A0S_033
HL_46680.1
HL_4V6F_1921/DA/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V6F_1931/DA/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4V6F_1941/DA/1451:1459No text annotation
Not in a motif group
geometric
HL_7RQB_037
HL_32426.1
HL_4V6F_1951/DA/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4V6F_1961/DA/1533:1538No text annotation
Not in a motif group
geometric
HL_2Y8Y_001
HL_20062.1
HL_4V6F_1971/DA/1565:1568No text annotation
Not in a motif group
homologous
HL_5J7L_172
HL_38927.2
HL_4V6F_1981/DA/1612:1619No text annotation
Not in a motif group
homologous
HL_7A0S_040
HL_64430.2
HL_4V6F_1991/DA/1630A:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4V6F_2001/DA/1691:1696UNCG
Not in a motif group
geometric
HL_4V9F_044
HL_03562.2
HL_4V6F_2011/DA/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4V6F_2021/DA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V6F_2031/DA/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4V6F_2041/DA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.1
HL_4V6F_2051/DA/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.1
HL_4V6F_2061/DA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V6F_2071/DA/1949:1957No text annotation
Not in a motif group
homologous
HL_7A0S_048
HL_51824.1
HL_4V6F_2081/DA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V6F_2091/DA/2143:2148UNCG
Not in a motif group
homologous
HL_3U4M_001
HL_03562.2
HL_4V6F_2101/DA/2209:2215No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_4V6F_2111/DA/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4V6F_2121/DA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V6F_2131/DA/2304:2312No text annotation
Not in a motif group
geometric
HL_5TBW_056
HL_76406.4
HL_4V6F_2141/DA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V6F_2151/DA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V6F_2161/DA/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.1
HL_4V6F_2171/DA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V6F_2181/DA/2471:2479No text annotation
Not in a motif group
homologous
HL_4WF9_056
HL_06192.2
HL_4V6F_2191/DA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_88526.2
HL_4V6F_2201/DA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V6F_2211/DA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.1
HL_4V6F_2221/DA/2658:2663No text annotation
Not in a motif group
geometric
HL_7RQB_064
HL_42097.1
HL_4V6F_2231/DA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V6F_2241/DA/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4V6F_2261/DA/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4V6F_2271/DA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.1
HL_4V6F_2281/DB/38:44No text annotation
Not in a motif group
homologous
HL_5J7L_203
HL_87939.1
HL_4V6F_2291/DB/86:90GNRA
Not in a motif group
homologous
HL_4V9F_072
HL_42097.1

Problematic loops

#loop idProblemSequence
HL_4V6F_022No text annotation
HL_4V6F_069No text annotation
HL_4V6F_116No text annotation
HL_4V6F_160Other HL
HL_4V6F_177No text annotation
HL_4V6F_225No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V6F_0011/AA/24:30,
1/AA/510:516
Triple sheared with non-canonical cWW
Not in a motif group
geometric
IL_7RQB_001
IL_66414.6
IL_4V6F_0021/AA/36:37,
1/AA/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.2
IL_4V6F_0031/AA/43:44,
1/AA/434:436
Minor groove platform
Not in a motif group
homologous
IL_7RQB_003
IL_42622.2
IL_4V6F_0041/AA/81:85,
1/AA/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_4V6F_0051/AA/183:184,
1/AA/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_4V6F_0061/AA/188:194,
1/AA/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
geometric
IL_7RQB_006
IL_04346.7
IL_4V6F_0071/AA/239:245,
1/AA/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_4V6F_0081/AA/270J:270K,
1/AA/270N:270P
Single bulged U
Not in a motif group
geometric
IL_7RQB_008
IL_83039.13
IL_4V6F_0091/AA/271:272,
1/AA/365:366
No text annotation
Not in a motif group
IL_4V6F_0101/AA/273:273A,
1/AA/363E:364
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.1
IL_4V6F_0111/AA/273F:278,
1/AA/362:363
No text annotation
Not in a motif group
IL_4V6F_0121/AA/280:284,
1/AA/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_4V6F_0131/AA/288:290,
1/AA/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_4V6F_0141/AA/293:295,
1/AA/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_4V6F_0151/AA/481:484,
1/AA/496:509
No text annotation
Not in a motif group
geometric
IL_7RQB_014
IL_60992.6
IL_4V6F_0161/AA/564:566,
1/AA/575:577
No text annotation
Not in a motif group
geometric
IL_7RQB_015
IL_95997.1
IL_4V6F_0171/AA/606:609A,
1/AA/618A:622
AAA cross-strand stack
Not in a motif group
homologous
IL_4WF9_019
IL_17136.1
IL_4V6F_0181/AA/672:674,
1/AA/806:808
No text annotation
Not in a motif group
homologous
IL_7RQB_017
IL_95997.1
IL_4V6F_0191/AA/674:678,
1/AA/799:806
tHW-tHW cross-strand stack
Not in a motif group
geometric
IL_4WF9_021
IL_17470.6
IL_4V6F_0201/AA/697:698,
1/AA/763:765
Single bulged A
Not in a motif group
homologous
IL_7RQB_019
IL_37497.2
IL_4V6F_0211/AA/702:703,
1/AA/728:730
Single bulged G
Not in a motif group
geometric
IL_7RQB_020
IL_00225.2
IL_4V6F_0221/AA/703:707,
1/AA/724:728
Triple sheared
Not in a motif group
homologous
IL_7RQB_021
IL_56467.8
IL_4V6F_0231/AA/738:741,
1/AA/756:758
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_4V6F_0241/AA/775:777,
1/AA/787:791
Multiple bulged bases
Not in a motif group
homologous
IL_7RQB_023
IL_90991.6
IL_4V6F_0251/AA/837:838,
1/AA/940:942
Single stack bend
Not in a motif group
homologous
IL_7A0S_022
IL_92001.1
IL_4V6F_0261/AA/844:846,
1/AA/931:934
Intercalated cWW
Not in a motif group
geometric
IL_7RQB_025
IL_52767.2
IL_4V6F_0271/AA/846:850,
1/AA/928:931
No text annotation
Not in a motif group
homologous
IL_7RQB_026
IL_94165.1
IL_4V6F_0281/AA/858:862,
1/AA/915:919
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_7RQB_027
IL_38862.1
IL_4V6F_0291/AA/862:863,
1/AA/913:915
Minor groove platform
Not in a motif group
homologous
IL_4WF9_032
IL_42622.2
IL_4V6F_0301/AA/864:868,
1/AA/909:912
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_02509.1
IL_4V6F_0311/AA/875:877,
1/AA/899:902
Minor groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_031
IL_46796.1
IL_4V6F_0321/AA/877:879,
1/AA/898:899
Minor groove platform
Not in a motif group
geometric
IL_4LFB_038
IL_42622.2
IL_4V6F_0331/AA/880:882,
1/AA/894:897
No text annotation
Not in a motif group
IL_4V6F_0341/AA/952:954,
1/AA/963:965
No text annotation
Not in a motif group
homologous
IL_7RQB_034
IL_95997.1
IL_4V6F_0351/AA/994:996,
1/AA/1159:1160
Single bulged C
Not in a motif group
homologous
IL_5J7L_276
IL_61258.12
IL_4V6F_0361/AA/998:1002,
1/AA/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_4WF9_036
IL_89002.2
IL_4V6F_0371/AA/1004:1011,
1/AA/1150:1151
SSU/LSU pseudoknot
Not in a motif group
homologous
IL_7RQB_037
IL_15861.7
IL_4V6F_0381/AA/1011:1013,
1/AA/1149:1150
Single bulged U
Not in a motif group
geometric
IL_5TBW_050
IL_83039.13
IL_4V6F_0391/AA/1018:1024,
1/AA/1140:1144
No text annotation
Not in a motif group
homologous
IL_4WF9_039
IL_57188.3
IL_4V6F_0401/AA/1024:1030,
1/AA/1124:1140
No text annotation
Not in a motif group
geometric
IL_7RQB_040
IL_50715.1
IL_4V6F_0411/AA/1031:1034,
1/AA/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_041
IL_82068.2
IL_4V6F_0421/AA/1043:1051,
1/AA/1108:1112
Kink-turn
Not in a motif group
homologous
IL_5J7L_284
IL_90538.4
IL_4V6F_0431/AA/1059:1062,
1/AA/1076:1079
No text annotation
Not in a motif group
homologous
IL_6PRV_001
IL_23544.2
IL_4V6F_0441/AA/1087:1091,
1/AA/1100:1102
No text annotation
Not in a motif group
geometric
IL_5B2P_002
IL_95997.1
IL_4V6F_0451/AA/1197:1198,
1/AA/1247:1249
No text annotation
Not in a motif group
IL_4V6F_0461/AA/1202:1206,
1/AA/1240:1243
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_4V6F_0471/AA/1208:1215,
1/AA/1234:1238
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2
IL_4V6F_0481/AA/1219:1221,
1/AA/1229A:1230
Single bulged A
Not in a motif group
homologous
IL_7RQB_048
IL_37497.2
IL_4V6F_0491/AA/1262:1269,
1/AA/2011:2017
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_049
IL_04346.7
IL_4V6F_0501/AA/1310:1313,
1/AA/1603:1604
Major groove platform; stack outside cWW
Not in a motif group
homologous
IL_7RQB_050
IL_50694.2
IL_4V6F_0511/AA/1319:1323,
1/AA/1331:1333
C-loop
Not in a motif group
homologous
IL_7RQB_051
IL_63596.6
IL_4V6F_0521/AA/1351:1355,
1/AA/1376:1380
UAA/GAN
Not in a motif group
homologous
IL_7RQB_052
IL_89002.2
IL_4V6F_0531/AA/1357:1359,
1/AA/1372:1374
Isolated tHS basepair with bulges
Not in a motif group
geometric
IL_1L9A_004
IL_38958.7
IL_4V6F_0541/AA/1359:1361,
1/AA/1370:1372
No text annotation
Not in a motif group
IL_4V6F_0551/AA/1415:1416,
1/AA/1582:1587
No text annotation
Not in a motif group
homologous
IL_7RQB_054
IL_67474.4
IL_4V6F_0561/AA/1417:1421,
1/AA/1577:1581
UAA/GAN
Not in a motif group
homologous
IL_7RQB_055
IL_89002.2
IL_4V6F_0571/AA/1433:1435,
1/AA/1557:1560
No text annotation
Not in a motif group
homologous
IL_7A0S_052
IL_55351.2
IL_4V6F_0581/AA/1437:1440,
1/AA/1551:1555
tSH-tHW
Not in a motif group
homologous
IL_7RQB_057
IL_04059.1
IL_4V6F_0591/AA/1448:1449A,
1/AA/1462:1463
Single stack bend
Not in a motif group
homologous
IL_7RQB_058
IL_76488.2
IL_4V6F_0601/AA/1450:1451,
1/AA/1459:1461
Single bulged A
Not in a motif group
homologous
IL_7RQB_059
IL_37497.2
IL_4V6F_0611/AA/1469:1473,
1/AA/1520:1523
UAA/GAN
Not in a motif group
homologous
IL_7RQB_060
IL_07235.1
IL_4V6F_0621/AA/1482:1483,
1/AA/1506:1512
No text annotation
Not in a motif group
homologous
IL_7RQB_061
IL_52493.1
IL_4V6F_0631/AA/1489:1491,
1/AA/1499:1500
Single bulged A
Not in a motif group
homologous
IL_7RQB_062
IL_37497.2
IL_4V6F_0641/AA/1526:1530,
1/AA/1541:1546
No text annotation
Not in a motif group
homologous
IL_7RQB_063
IL_02656.1
IL_4V6F_0651/AA/1651:1656,
1/AA/2004:2006
No text annotation
Not in a motif group
homologous
IL_5J7L_304
IL_12566.2
IL_4V6F_0661/AA/1663:1665,
1/AA/1995:1997
Isolated tWW turn
Not in a motif group
homologous
IL_5J7L_305
IL_54997.7
IL_4V6F_0671/AA/1666:1669,
1/AA/1993:1994
Major groove platform; stack outside cWW
Not in a motif group
geometric
IL_7RQB_066
IL_50694.2
IL_4V6F_0681/AA/1669:1674,
1/AA/1990:1993
Intercalated tWH
Not in a motif group
homologous
IL_7RQB_067
IL_82842.2
IL_4V6F_0691/AA/1686:1691,
1/AA/1696:1702
tSH-tSH-tHH-tHS
Not in a motif group
homologous
IL_7RQB_068
IL_65969.2
IL_4V6F_0701/AA/1770:1771,
1/AA/1980:1982
Single bulged A
Not in a motif group
homologous
IL_7RQB_069
IL_37497.2
IL_4V6F_0711/AA/1798:1804,
1/AA/1813:1821
Kink-turn related
Not in a motif group
homologous
IL_7RQB_070
IL_17069.3
IL_4V6F_0721/AA/1837:1840,
1/AA/1902:1903
Major groove outside cWW, minor groove, intercalation pocket
Not in a motif group
homologous
IL_7RQB_071</