Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_4V87_0011/AA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4V87_0021/AA/87:95No text annotation
Not in a motif group
homologous
HL_7RQB_002
HL_96598.1
HL_4V87_0031/AA/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4V87_0041/AA/137A:141ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4V87_0051/AA/155:171No text annotation
Not in a motif group
geometric
HL_361D_002
HL_90617.2
HL_4V87_0061/AA/194:201No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_4V87_0071/AA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4V87_0081/AA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4V87_0091/AA/270K:270NNo text annotation
Not in a motif group
homologous
HL_7RQB_009
HL_89098.1
HL_4V87_0101/AA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V87_0111/AA/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_4V87_0121/AA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4V87_0131/AA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4V87_0141/AA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V87_0151/AA/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.2
HL_4V87_0161/AA/487:493No text annotation
Not in a motif group
homologous
HL_7RQB_016
HL_42097.2
HL_4V87_0171/AA/544:549No text annotation
Not in a motif group
geometric
HL_7RQB_046
HL_42097.2
HL_4V87_0181/AA/566:575No text annotation
Not in a motif group
geometric
HL_7RQB_018
HL_89380.2
HL_4V87_0191/AA/611:617No text annotation
Not in a motif group
homologous
HL_7A0S_019
HL_32369.1
HL_4V87_0201/AA/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4V87_0211/AA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.2
HL_4V87_0221/AA/654F:654ONo text annotation
Not in a motif group
HL_4V87_0231/AA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V87_0241/AA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V87_0251/AA/779:785No text annotation
Not in a motif group
homologous
HL_7A0S_023
HL_27930.1
HL_4V87_0261/AA/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_4V87_0271/AA/883:893No text annotation
Not in a motif group
HL_4V87_0281/AA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4V87_0291/AA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V87_0321/AA/1171:1178No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_89098.1
HL_4V87_0331/AA/1223:1228No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4V87_0341/AA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V87_0351/AA/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_4V87_0361/AA/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V87_0371/AA/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4V87_0381/AA/1451:1459No text annotation
Not in a motif group
homologous
HL_7RQB_037
HL_32426.1
HL_4V87_0391/AA/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4V87_0401/AA/1533:1538No text annotation
Not in a motif group
HL_4V87_0411/AA/1565:1568No text annotation
Not in a motif group
homologous
HL_7RQB_039
HL_38927.2
HL_4V87_0421/AA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4V87_0431/AA/1630A:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4V87_0441/AA/1691:1696No text annotation
Not in a motif group
homologous
HL_7RQB_042
HL_03562.2
HL_4V87_0451/AA/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4V87_0461/AA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V87_0471/AA/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4V87_0481/AA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4V87_0491/AA/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4V87_0501/AA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V87_0511/AA/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_4V87_0521/AA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V87_0531/AA/2143:2148UNCG
Not in a motif group
homologous
HL_3U4M_001
HL_03562.2
HL_4V87_0541/AA/2209:2215No text annotation
Not in a motif group
geometric
HL_6U8D_003
HL_89098.1
HL_4V87_0551/AA/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4V87_0561/AA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V87_0571/AA/2303:2313No text annotation
Not in a motif group
homologous
HL_5J7L_188
HL_11805.3
HL_4V87_0581/AA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V87_0591/AA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V87_0601/AA/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_4V87_0611/AA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V87_0621/AA/2471:2479No text annotation
Not in a motif group
homologous
HL_4WF9_056
HL_06192.2
HL_4V87_0631/AA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4V87_0641/AA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V87_0651/AA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4V87_0661/AA/2658:2663GNRA
Not in a motif group
geometric
HL_1G1X_001
HL_42097.2
HL_4V87_0671/AA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V87_0681/AA/2745:2759No text annotation
Not in a motif group
homologous
HL_7RQB_066
HL_56677.7
HL_4V87_0691/AA/2794:2802No text annotation
Not in a motif group
geometric
HL_4V9F_003
HL_52841.1
HL_4V87_0701/AA/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4V87_0711/AA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4V87_0721/AB/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_4V87_0731/AB/86:90GNRA
Not in a motif group
homologous
HL_4V9F_072
HL_42097.2
HL_4V87_0741/BA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V87_0751/BA/81:88No text annotation
Not in a motif group
HL_4V87_0761/BA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4V87_0771/BA/186F:191ANo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4V87_0781/BA/201:216No text annotation
Not in a motif group
homologous
HL_4LFB_005
HL_91104.1
HL_4V87_0791/BA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V87_0801/BA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4V87_0811/BA/320:333No text annotation
Not in a motif group
homologous
HL_5J7L_008
HL_81205.2
HL_4V87_0821/BA/342:347No text annotation
Not in a motif group
homologous
HL_6CZR_080
HL_03562.2
HL_4V87_0831/BA/379:384GNRA
Not in a motif group
homologous
HL_4LFB_010
HL_42097.2
HL_4V87_0841/BA/419:424UNCG
Not in a motif group
homologous
HL_5J7L_011
HL_03562.2
HL_4V87_0851/BA/458:474No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4V87_0861/BA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4V87_0871/BA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4V87_0881/BA/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_4V87_0891/BA/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4V87_0901/BA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V87_0911/BA/838:848No text annotation
Not in a motif group
homologous
HL_6CZR_089
HL_53837.1
HL_4V87_0921/BA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4V87_0931/BA/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.2
HL_4V87_0941/BA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V87_0951/BA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_4V87_0971/BA/1076:1081GNRA
Not in a motif group
homologous
HL_5J7L_023
HL_42097.2
HL_4V87_0981/BA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4V87_0991/BA/1134:1140No text annotation
Not in a motif group
homologous
HL_6CZR_097
NA
HL_4V87_1001/BA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4V87_1011/BA/1265:1270GNRA
Not in a motif group
homologous
HL_5J7L_027
HL_42097.2
HL_4V87_1021/BA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V87_1031/BA/1356:1366No text annotation
Not in a motif group
HL_4V87_1041/BA/1449:1454No text annotation
Not in a motif group
homologous
HL_6CZR_102
HL_49722.1
HL_4V87_1051/BA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V87_1061/BB/11:25No text annotation
Not in a motif group
HL_4V87_1071/BB/32:40tRNA anticodon loop
Not in a motif group
geometric
HL_5IBB_210
HL_53597.2
HL_4V87_1081/BB/49:55No text annotation
Not in a motif group
geometric
HL_4WSM_210
HL_59445.1
HL_4V87_1091/BB/64:72T-loop with 2 stacked bulged bases
Not in a motif group
geometric
HL_5HR6_003
HL_22280.1
HL_4V87_1101/BC/13:23No text annotation
Not in a motif group
homologous
HL_4TUE_033
HL_25462.2
HL_4V87_1111/BC/32:40No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_4V87_1121/BC/54:62T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_4V9Q_215
HL_22280.1
HL_4V87_1131/BD/12:24No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_4V87_1141/BD/32:40No text annotation
Not in a motif group
HL_4V87_1151/BD/50:66No text annotation
Not in a motif group
homologous
HL_5E81_221
NA
HL_4V87_1161/CA/12:22No text annotation
Not in a motif group
homologous
HL_4LFB_001
HL_89881.2
HL_4V87_1181/CA/158:163GNRA
Not in a motif group
homologous
HL_4LFB_003
HL_42097.2
HL_4V87_1191/CA/186F:191ANo text annotation
Not in a motif group
homologous
HL_6CZR_075
HL_10278.1
HL_4V87_1201/CA/201:216No text annotation
Not in a motif group
homologous
HL_4LFB_005
HL_91104.1
HL_4V87_1211/CA/259:267No text annotation
Not in a motif group
homologous
HL_4LFB_006
HL_69023.2
HL_4V87_1221/CA/296:301GNRA
Not in a motif group
homologous
HL_4LFB_007
HL_42097.2
HL_4V87_1231/CA/320:333No text annotation
Not in a motif group
homologous
HL_4LFB_008
HL_81205.2
HL_4V87_1241/CA/342:347UNCG
Not in a motif group
homologous
HL_5J7L_009
HL_03562.2
HL_4V87_1251/CA/379:384GNRA
Not in a motif group
homologous
HL_5J7L_010
HL_42097.2
HL_4V87_1261/CA/419:424No text annotation
Not in a motif group
homologous
HL_6CZR_082
HL_03562.2
HL_4V87_1271/CA/458:474No text annotation
Not in a motif group
homologous
HL_4LFB_012
HL_43656.2
HL_4V87_1281/CA/522:527No text annotation
Not in a motif group
geometric
HL_4WF9_003
HL_75407.1
HL_4V87_1291/CA/617:623No text annotation
Not in a motif group
homologous
HL_4LFB_014
HL_26881.1
HL_4V87_1301/CA/689:698No text annotation
Not in a motif group
homologous
HL_4LFB_015
HL_12326.1
HL_4V87_1311/CA/726:731Other HL
Not in a motif group
homologous
HL_4LFB_016
HL_87030.2
HL_4V87_1321/CA/786:796No text annotation
Not in a motif group
homologous
HL_4LFB_017
HL_12326.1
HL_4V87_1331/CA/838:848No text annotation
Not in a motif group
homologous
HL_4LFB_018
HL_38927.2
HL_4V87_1341/CA/862:867GNRA
Not in a motif group
homologous
HL_4LFB_019
HL_42097.2
HL_4V87_1351/CA/897:902GNRA
Not in a motif group
homologous
HL_5J7L_020
HL_42097.2
HL_4V87_1361/CA/963:972No text annotation
Not in a motif group
homologous
HL_4LFB_021
NA
HL_4V87_1371/CA/1012:1017GNRA
Not in a motif group
homologous
HL_4LFB_022
HL_42097.2
HL_4V87_1391/CA/1076:1081GNRA
Not in a motif group
homologous
HL_4LFB_024
HL_42097.2
HL_4V87_1401/CA/1089:1096No text annotation
Not in a motif group
homologous
HL_4LFB_025
HL_71554.2
HL_4V87_1411/CA/1132:1142No text annotation
Not in a motif group
HL_4V87_1421/CA/1165:1171GNRA
Not in a motif group
homologous
HL_4LFB_027
HL_42097.2
HL_4V87_1431/CA/1265:1270Other HL
Not in a motif group
homologous
HL_4LFB_028
HL_42097.2
HL_4V87_1441/CA/1314:1323No text annotation
Not in a motif group
homologous
HL_4LFB_029
HL_89380.2
HL_4V87_1451/CA/1356:1366No text annotation
Not in a motif group
homologous
HL_4LFB_030
HL_96366.1
HL_4V87_1461/CA/1449:1454No text annotation
Not in a motif group
geometric
HL_4TUW_002
HL_28980.1
HL_4V87_1471/CA/1515:1520No text annotation
Not in a motif group
homologous
HL_4LFB_032
NA
HL_4V87_1481/CB/12:24No text annotation
Not in a motif group
HL_4V87_1491/CB/32:40tRNA anticodon loop
Not in a motif group
geometric
HL_5IBB_210
HL_53597.2
HL_4V87_1501/CB/49:54No text annotation
Not in a motif group
HL_4V87_1511/CB/64:72T-loop with 2 stacked bulged bases
Not in a motif group
geometric
HL_6JQ6_003
HL_71309.1
HL_4V87_1521/CC/13:23No text annotation
Not in a motif group
homologous
HL_4TUE_033
HL_25462.2
HL_4V87_1531/CC/32:40No text annotation
Not in a motif group
homologous
HL_5E81_212
NA
HL_4V87_1541/CC/54:62T-loop with 2 stacked bulged bases
Not in a motif group
homologous
HL_5HR7_006
HL_22280.1
HL_4V87_1551/CD/12:24No text annotation
Not in a motif group
geometric
HL_5TBW_012
HL_86373.2
HL_4V87_1561/CD/32:40No text annotation
Not in a motif group
HL_4V87_1571/CD/52:64No text annotation
Not in a motif group
HL_4V87_1581/DA/59:68No text annotation
Not in a motif group
homologous
HL_7RQB_001
HL_99167.1
HL_4V87_1591/DA/87:95No text annotation
Not in a motif group
geometric
HL_5TBW_022
HL_94803.2
HL_4V87_1601/DA/123:128No text annotation
Not in a motif group
homologous
HL_7RQB_003
HL_75407.1
HL_4V87_1611/DA/137A:141ANo text annotation
Not in a motif group
homologous
HL_7RQB_004
HL_79921.3
HL_4V87_1621/DA/194:201No text annotation
Not in a motif group
geometric
HL_7RQB_006
HL_06192.2
HL_4V87_1631/DA/225:230No text annotation
Not in a motif group
homologous
HL_7RQB_007
HL_02862.2
HL_4V87_1641/DA/246:252No text annotation
Not in a motif group
homologous
HL_7RQB_008
HL_67216.7
HL_4V87_1651/DA/270K:270NNo text annotation
Not in a motif group
HL_4V87_1661/DA/305:312No text annotation
Not in a motif group
homologous
HL_7RQB_010
HL_89380.2
HL_4V87_1671/DA/319:323No text annotation
Not in a motif group
homologous
HL_7RQB_011
HL_75407.1
HL_4V87_1681/DA/327:335No text annotation
Not in a motif group
homologous
HL_7RQB_012
HL_08002.9
HL_4V87_1691/DA/382:392No text annotation
Not in a motif group
homologous
HL_7RQB_013
HL_91503.4
HL_4V87_1701/DA/410:417No text annotation
Not in a motif group
homologous
HL_7RQB_014
HL_96598.1
HL_4V87_1711/DA/462:467No text annotation
Not in a motif group
homologous
HL_7RQB_015
HL_42097.2
HL_4V87_1721/DA/487:493GNRA
Not in a motif group
homologous
HL_4WF9_016
HL_42097.2
HL_4V87_1731/DA/544:549GNRA
Not in a motif group
geometric
HL_4ENC_002
HL_42097.2
HL_4V87_1741/DA/566:575No text annotation
Not in a motif group
homologous
HL_7RQB_018
HL_89380.2
HL_4V87_1751/DA/611:617No text annotation
Not in a motif group
homologous
HL_7RQB_019
HL_32369.1
HL_4V87_1761/DA/629:634No text annotation
Not in a motif group
homologous
HL_7RQB_020
HL_42097.2
HL_4V87_1771/DA/641:647No text annotation
Not in a motif group
homologous
HL_7RQB_021
HL_42097.2
HL_4V87_1791/DA/712:719No text annotation
Not in a motif group
homologous
HL_7RQB_022
HL_84085.2
HL_4V87_1801/DA/744:753No text annotation
Not in a motif group
homologous
HL_7RQB_023
HL_39334.6
HL_4V87_1811/DA/779:785Other HL
Not in a motif group
geometric
HL_2NUE_001
HL_07518.1
HL_4V87_1821/DA/826:831No text annotation
Not in a motif group
homologous
HL_7RQB_025
HL_64365.1
HL_4V87_1831/DA/884:892No text annotation
Not in a motif group
HL_4V87_1841/DA/955:962No text annotation
Not in a motif group
homologous
HL_7RQB_027
HL_42097.2
HL_4V87_1851/DA/978:985No text annotation
Not in a motif group
homologous
HL_7RQB_028
HL_64430.2
HL_4V87_1881/DA/1171:1178No text annotation
Not in a motif group
HL_4V87_1891/DA/1223:1228No text annotation
Not in a motif group
homologous
HL_7RQB_032
HL_42097.2
HL_4V87_1901/DA/1281:1289No text annotation
Not in a motif group
homologous
HL_7RQB_033
HL_89380.2
HL_4V87_1911/DA/1324:1330No text annotation
Not in a motif group
homologous
HL_7RQB_034
HL_46680.1
HL_4V87_1921/DA/1363:1368No text annotation
Not in a motif group
homologous
HL_7RQB_035
HL_87030.2
HL_4V87_1931/DA/1389:1398No text annotation
Not in a motif group
homologous
HL_7RQB_036
HL_69023.2
HL_4V87_1941/DA/1451:1459No text annotation
Not in a motif group
geometric
HL_7RQB_037
HL_32426.1
HL_4V87_1951/DA/1492:1498No text annotation
Not in a motif group
homologous
HL_7RQB_038
HL_46680.1
HL_4V87_1961/DA/1533:1538No text annotation
Not in a motif group
geometric
HL_4V88_198
HL_91104.1
HL_4V87_1971/DA/1565:1568No text annotation
Not in a motif group
homologous
HL_7A0S_039
HL_38927.2
HL_4V87_1981/DA/1612:1619No text annotation
Not in a motif group
homologous
HL_7RQB_040
HL_64430.2
HL_4V87_1991/DA/1630A:1635No text annotation
Not in a motif group
homologous
HL_7RQB_041
HL_01057.1
HL_4V87_2001/DA/1691:1696UNCG
Not in a motif group
geometric
HL_5J7L_175
HL_03562.2
HL_4V87_2011/DA/1727:1733No text annotation
Not in a motif group
homologous
HL_7RQB_043
HL_43656.2
HL_4V87_2021/DA/1752:1756No text annotation
Not in a motif group
homologous
HL_7RQB_044
HL_76539.2
HL_4V87_2031/DA/1777:1787No text annotation
Not in a motif group
homologous
HL_7RQB_045
HL_43613.5
HL_4V87_2041/DA/1806:1811No text annotation
Not in a motif group
homologous
HL_7RQB_046
HL_42097.2
HL_4V87_2051/DA/1864:1878No text annotation
Not in a motif group
homologous
HL_7RQB_047
HL_42097.2
HL_4V87_2061/DA/1910:1920No text annotation
Not in a motif group
geometric
HL_5TBW_049
HL_71924.2
HL_4V87_2071/DA/1949:1957No text annotation
Not in a motif group
homologous
HL_7RQB_049
HL_51824.1
HL_4V87_2081/DA/2027:2036No text annotation
Not in a motif group
homologous
HL_7RQB_050
HL_90642.6
HL_4V87_2091/DA/2143:2148UNCG
Not in a motif group
homologous
HL_3U4M_001
HL_03562.2
HL_4V87_2101/DA/2209:2215No text annotation
Not in a motif group
homologous
HL_7RQB_052
HL_98426.1
HL_4V87_2111/DA/2248:2256No text annotation
Not in a motif group
homologous
HL_7RQB_053
NA
HL_4V87_2121/DA/2264:2276No text annotation
Not in a motif group
homologous
HL_7RQB_054
HL_19870.6
HL_4V87_2131/DA/2302:2314No text annotation
Not in a motif group
HL_4V87_2141/DA/2324:2331No text annotation
Not in a motif group
homologous
HL_7RQB_056
HL_12078.2
HL_4V87_2151/DA/2355:2362No text annotation
Not in a motif group
homologous
HL_7RQB_057
HL_09136.1
HL_4V87_2161/DA/2374:2379No text annotation
Not in a motif group
homologous
HL_7RQB_058
HL_42097.2
HL_4V87_2171/DA/2404:2413No text annotation
Not in a motif group
homologous
HL_7RQB_059
HL_30784.2
HL_4V87_2181/DA/2471:2479No text annotation
Not in a motif group
homologous
HL_5J7L_193
HL_06192.2
HL_4V87_2191/DA/2528:2535No text annotation
Not in a motif group
homologous
HL_7RQB_061
HL_91104.1
HL_4V87_2201/DA/2551:2557No text annotation
Not in a motif group
homologous
HL_4WF9_058
HL_43656.2
HL_4V87_2211/DA/2594:2599No text annotation
Not in a motif group
homologous
HL_7RQB_063
HL_42097.2
HL_4V87_2221/DA/2658:2663GNRA
Not in a motif group
geometric
HL_5TBW_017
HL_42097.2
HL_4V87_2231/DA/2701:2706No text annotation
Not in a motif group
homologous
HL_7RQB_065
HL_53171.2
HL_4V87_2241/DA/2745:2759No text annotation
Not in a motif group
homologous
HL_7A0S_065
HL_56677.7
HL_4V87_2251/DA/2794:2802No text annotation
Not in a motif group
geometric
HL_5U3G_001
HL_87030.2
HL_4V87_2261/DA/2819:2827No text annotation
Not in a motif group
homologous
HL_7RQB_068
HL_27930.1
HL_4V87_2271/DA/2856:2861No text annotation
Not in a motif group
homologous
HL_7RQB_069
HL_42097.2
HL_4V87_2281/DB/38:44No text annotation
Not in a motif group
homologous
HL_7RQB_070
HL_87939.1
HL_4V87_2291/DB/86:90No text annotation
Not in a motif group
homologous
HL_7RQB_071
HL_42097.2

Problematic loops

#loop idProblemSequence
HL_4V87_030No text annotation
HL_4V87_031No text annotation
HL_4V87_096No text annotation
HL_4V87_117No text annotation
HL_4V87_138No text annotation
HL_4V87_178No text annotation
HL_4V87_186GNRA
HL_4V87_187No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_4V87_0011/AA/24:30,
1/AA/510:516
Triple sheared with non-canonical cWW
Not in a motif group
homologous
IL_7RQB_001
IL_66414.6
IL_4V87_0021/AA/36:37,
1/AA/442:444
Single bulged A
Not in a motif group
homologous
IL_7RQB_002
IL_37497.3
IL_4V87_0031/AA/43:45,
1/AA/433:436
Major groove platform with extra cWW
Not in a motif group
geometric
IL_4V9F_003
IL_18471.2
IL_4V87_0041/AA/81:85,
1/AA/97:105
Kink-turn
Not in a motif group
homologous
IL_7RQB_004
IL_45067.2
IL_4V87_0051/AA/183:184,
1/AA/212:214
Single stack bend
Not in a motif group
homologous
IL_7RQB_005
IL_76488.2
IL_4V87_0061/AA/188:194,
1/AA/201:208
8x7 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_006
IL_04346.7
IL_4V87_0071/AA/239:245,
1/AA/253:258
7x6 Sarcin-Ricin; G-bulge
Not in a motif group
homologous
IL_7RQB_007
IL_76042.2
IL_4V87_0081/AA/270J:270K,
1/AA/270N:270P
No text annotation
Not in a motif group
IL_4V87_0091/AA/271:272,
1/AA/365:366
No text annotation
Not in a motif group
IL_4V87_0101/AA/273:273A,
1/AA/363E:364
Major groove platform
Not in a motif group
homologous
IL_7RQB_009
IL_27635.2
IL_4V87_0111/AA/273F:279,
1/AA/361:363
No text annotation
Not in a motif group
IL_4V87_0121/AA/280:284,
1/AA/357:360
tSH-tHW
Not in a motif group
homologous
IL_7RQB_011
IL_04059.1
IL_4V87_0131/AA/288:290,
1/AA/350:353
Isolated tHS basepair with bulges
Not in a motif group
homologous
IL_7RQB_012
IL_38958.7
IL_4V87_0141/AA/293:295,
1/AA/343:347
No text annotation
Not in a motif group
homologous
IL_7RQB_013
IL_69440.1
IL_4V87_0151/AA/378:380,
1/AA/394:396
No text annotation
Not in a motif group
geometric
IL_7RQB_083
IL_95997.1
IL_4V87_0161/AA/481:484,
1/AA/496:509
No text annotation
Not in a motif group
homologous
IL_7RQB_014
IL_60992.6
IL_4V87_0171/AA/564:566,
1/AA/575:577
No text annotation
Not in a motif group
homologous
IL_7RQB_015
IL_95997.1
IL_4V87_0181/AA/606:609A,
1/AA/618A:622
AAA cross-strand stack
Not in a motif group
homologous
IL_4WF9_019
IL_17136.1
IL_4V87_0191/AA/672:674,
1/AA/806:808
No text annotation
Not in a motif group
homologous
IL_5J7L_259
IL_95997.1
IL_4V87_0201/AA/674:678,
1/AA/799:806
tHW-tHW cross-strand stack
Not in a motif group
geometric
IL_4WF9_021
IL_17470.6
IL_4V87_0211/AA/697:698,
1/AA/763:765
Single bulged A
Not in a motif group
geometric
IL_7RQB_019
IL_37497.3
IL_4V87_0221/AA/702:703,
1/AA/728:730
Single bulged G
Not in a motif group
homologous
IL_7RQB_020
IL_00225.3
IL_4V87_0231/AA/703:707,
1/AA/724:728
Triple sheared
Not in a motif group
geometric
IL_7RQB_021
IL_56467.8
IL_4V87_0241/AA/738:741,
1/AA/756:758
Major groove platform with extra cWW
Not in a motif group
homologous
IL_7RQB_022
IL_05564.2
IL_4V87_0251/AA/775:777,
1/AA/787:791
Multiple bulged bases
Not in a motif group
geometric
IL_7RQB_023
IL_90991.6
IL_4V87_0261/AA/837:838,
1/AA/940:942
Single stack bend
Not in a motif group
homologous
IL_7RQB_024
IL_92001.1
IL_4V87_0271/AA/844:846,
1/AA/931:934
Intercalated cWW
Not in a motif group
geometric
IL_7RQB_025
IL_52767.2
IL_4V87_0281/AA/846:850,
1/AA/928:931
No text annotation
Not in a motif group
homologous
IL_7RQB_026
IL_94165.1
IL_4V87_0291/AA/858:862,
1/AA/915:919
5x5 Sarcin-Ricin with intercalated A; G-bulge
Not in a motif group
geometric
IL_7RQB_027
IL_38862.1
IL_4V87_0301/AA/862:863,
1/AA/913:915
Minor groove platform
Not in a motif group
homologous
IL_7RQB_028
IL_42622.2
IL_4V87_0311/AA/864:868,
1/AA/909:912
C-loop
Not in a motif group
homologous
IL_7RQB_029
IL_02509.1
IL_4V87_0321/AA/870:872,
1/AA/905:907
Isolated cWS basepair
Not in a motif group
homologous
IL_4WF9_034
IL_52767.2
IL_4V87_0331/AA/875:880,
1/AA/897:902
No text annotation
Not in a motif group
IL_4V87_0341/AA/880:882,
1/AA/894:897
No text annotation
Not in a motif group
IL_4V87_0351/AA/952:954,
1/AA/963:965
No text annotation
Not in a motif group
homologous
IL_7RQB_034
IL_95997.1
IL_4V87_0361/AA/994:996,
1/AA/1159:1160
Single bulged C
Not in a motif group
homologous
IL_7RQB_035
IL_61258.12
IL_4V87_0371/AA/998:1002,
1/AA/1153:1157
UAA/GAN
Not in a motif group
homologous
IL_7RQB_036
IL_89002.2
IL_4V87_0381/AA/1004:1011,
1/AA/1150:1151
SSU/LSU pseudoknot
Not in a motif group
geometric
IL_7RQB_037
IL_15861.7
IL_4V87_0391/AA/1011:1013,
1/AA/1149:1150
Single bulged U
Not in a motif group
homologous
IL_7RQB_038
IL_83039.14
IL_4V87_0401/AA/1018:1024,
1/AA/1140:1144
No text annotation
Not in a motif group
homologous
IL_4WF9_039
IL_57188.3
IL_4V87_0411/AA/1024:1030,
1/AA/1124:1140
No text annotation
Not in a motif group
geometric
IL_7RQB_040
IL_50715.1
IL_4V87_0421/AA/1031:1034,
1/AA/1121:1123
Isolated non-canonical cWW with bulges
Not in a motif group
homologous
IL_7RQB_041
IL_82068.2
IL_4V87_0431/AA/1043:1051,
1/AA/1108:1112
Kink-turn
Not in a motif group
homologous
IL_5J7L_284
IL_90538.4
IL_4V87_0461/AA/1196:1198,
1/AA/1247:1250
Isolated cWS basepair
Not in a motif group
homologous
IL_7RQB_045
IL_52767.2
IL_4V87_0471/AA/1202:1206,
1/AA/1240:1243
No text annotation
Not in a motif group
homologous
IL_7RQB_046
IL_68574.2
IL_4V87_0481/AA/1208:1215,
1/AA/1234:1238
Kink-turn
Not in a motif group
homologous
IL_7RQB_047
IL_70923.2