4V8Y Summary

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Structure Title
4V8Y Summary
Authors
Release Date
2014-07-09
Experimental technique
ELECTRON MICROSCOPY
Resolution
4.3 Å
Chains
  • 6 RNA chains from Saccharomyces cerevisiae
  • 81 other chains
Compounds
40S RIBOSOMAL PROTEIN S26-A, 40S RIBOSOMAL PROTEIN S27-A, 40S RIBOSOMAL PROTEIN S28-A, 40S RIBOSOMAL PROTEIN S29-A, 40S RIBOSOMAL PROTEIN S30-A, UBIQUITIN-40S RIBOSOMAL PROTEIN S31, GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-LIKE PROTEIN, SUPPRESSOR PROTEIN STM1, 40S RIBOSOMAL PROTEIN S0-A, 40S RIBOSOMAL PROTEIN S1-A, 40S RIBOSOMAL PROTEIN S2, 40S RIBOSOMAL PROTEIN S3, 40S RIBOSOMAL PROTEIN S4-A, 40S RIBOSOMAL PROTEIN S5, 40S RIBOSOMAL PROTEIN S6-A, 40S RIBOSOMAL PROTEIN S7-A, 40S RIBOSOMAL PROTEIN S8-A, 40S RIBOSOMAL PROTEIN S9-A, 40S RIBOSOMAL PROTEIN S10-A, 40S RIBOSOMAL PROTEIN S11-A, 40S RIBOSOMAL PROTEIN S12, 40S RIBOSOMAL PROTEIN S13, 40S RIBOSOMAL PROTEIN S14-A, 40S RIBOSOMAL PROTEIN S15, 40S RIBOSOMAL PROTEIN S16-A, 40S RIBOSOMAL PROTEIN S17-A, 40S RIBOSOMAL PROTEIN S18-A, 40S RIBOSOMAL PROTEIN S19-A, 40S RIBOSOMAL PROTEIN S20, 40S RIBOSOMAL PROTEIN S21-A, 40S RIBOSOMAL PROTEIN S22-A, 40S RIBOSOMAL PROTEIN S23-A, 40S RIBOSOMAL PROTEIN S24-A, 40S RIBOSOMAL PROTEIN S25-A, 18S RIBOSOMAL RNA, 25S RIBOSOMAL RNA, 5S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNA, 60S RIBOSOMAL PROTEIN L2-B, 60S RIBOSOMAL PROTEIN L3, 60S RIBOSOMAL PROTEIN L4-A, 60S RIBOSOMAL PROTEIN L5, 60S RIBOSOMAL PROTEIN L6-A, 60S RIBOSOMAL PROTEIN L7-A, 60S RIBOSOMAL PROTEIN L8-A, 60S RIBOSOMAL PROTEIN L9-A, 60S RIBOSOMAL PROTEIN L10, 60S RIBOSOMAL PROTEIN L11-A, 60S RIBOSOMAL PROTEIN L11-A, 60S RIBOSOMAL PROTEIN L13-A, 60S RIBOSOMAL PROTEIN L14-B, 60S RIBOSOMAL PROTEIN L15-A, 60S RIBOSOMAL PROTEIN L16-A, 60S RIBOSOMAL PROTEIN L17-A, 60S RIBOSOMAL PROTEIN L18-A, 60S RIBOSOMAL PROTEIN L19-B, 60S RIBOSOMAL PROTEIN L20-B, 60S RIBOSOMAL PROTEIN L21-A, 60S RIBOSOMAL PROTEIN L22-A, 60S RIBOSOMAL PROTEIN L23-A, 60S RIBOSOMAL PROTEIN L24-A, 60S RIBOSOMAL PROTEIN L25, 60S RIBOSOMAL PROTEIN L26-A, 60S RIBOSOMAL PROTEIN L27-A, 60S RIBOSOMAL PROTEIN L28, 60S RIBOSOMAL PROTEIN L29, 60S RIBOSOMAL PROTEIN L30, 60S RIBOSOMAL PROTEIN L31-A, 60S RIBOSOMAL PROTEIN L32, 60S RIBOSOMAL PROTEIN L33-A, 60S RIBOSOMAL PROTEIN L34-A, 60S RIBOSOMAL PROTEIN L35-B, 60S RIBOSOMAL PROTEIN L36-A, 60S RIBOSOMAL PROTEIN L37-A, 60S RIBOSOMAL PROTEIN L38, 60S RIBOSOMAL PROTEIN L39, UBIQUITIN-60S RIBOSOMAL PROTEIN L40, 60S RIBOSOMAL PROTEIN L41-B, 60S RIBOSOMAL PROTEIN L42-A, 60S ACIDIC RIBOSOMAL PROTEIN P0, 60S ACIDIC RIBOSOMAL PROTEIN P1, 60S ACIDIC RIBOSOMAL PROTEIN P2, 50S RIBOSOMAL PROTEIN L1, 50S RIBOSOMAL PROTEIN L1, EUKARYOTIC RIBOSOMAL L1_RRNA, EUKARYOTIC TRANSLATION INITIATION FACTOR 5B, EUKARYOTIC RIBOSOMAL P_E TRNA

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 4V8Y contains:
  • 250 internal loops from 0 motif groups
  • 117 hairpin loops from 0 motif groups
  • 20 three-way junctions
More

3D Redundancy

4V8Y has chains which belong to the following equivalence classes in the current representative set:

Similar structures

4V88 5JUT 6RBE 5JUO 6T83 6EML 6T83 6KE6 5MC6 8BQD 5JUU 6Y7C 4U4O 6ZQG 7NRD 7ZUW 6GQV 6XIQ 5JUS 7WTR 6GQB 7NRC 8BQX 4U56 6TNU 4U55 7ZPQ 8C00 4U51 4U4Y 6S47 4U3N 6Z6K 6Z6J 6FAI 6LQP 4U56 6SV4 4U53 6RBD 4U53 5JUP 4U50 4U51 7D63 3J6X 3J6Y 6LQV 6LQT 7AJT 6ZCE 6I7O 5WYK 3J77 3J78 6ZU9 4V6I 5WYJ 6LQR 6ZQE 5TZS 7D5T 4V8Z 6ZQF 7D5S 6I7O 5WLC 7WTQ 7WTM 7WTP 6LQU 7WTO 4U4O 7WTL 7D4I 6ZQD 6GQ1 7ZRS 6ZQC 6ZQB 7SUK 6LQQ 5LL6 6LQS 7AJU 7WTN 4U50 7Q08 5DGV 5DGE 5TGA 5DAT 4V7R 4V7R 5TGM 5TGM 5DGF 5DC3 5DAT 7ZUX 7PZY 7ZW0 5DC3 5DGF 5DGE 5DGV 5TGA 5NDG 5NDG 5ON6 5NDW 5MEI 5I4L 5OBM 6HHQ 7OSA 5TBW 4V88 5LYB 5I4L 5OBM 5NDV 5NDV 5LYB 6HHQ 5NDW 5ON6 5MEI 7OSM 5TBW 6T7I 4U4Z 4U6F 6Q8Y 4U4N 4U4Q 4U6F 4U4U 4U52 6XIR 7B7D 6SV4 4U4N 5M1J 4U55 6T7T 4U4Z 4U3N 4U4Y 6SV4 7RR5 4U3M 4U52 6SNT 6TB3 4U4R 6WOO 7Q0P 7Q0R 7Q0F 7MPJ 4U4R 4U3U 7A1G 4U4U 4U4Q 4U3M 8C01 7MPI 7N8B 4U3U 6ZVI 6T4Q
Structures from NR_all_03510.51
BGSU RNA Site //