Valid loops

#loop idlocationmotif
11/AA/30:32,1/AA/552:553NA
21/AA/44:45,1/AA/396:398NA
31/AA/47:52,1/AA/359:361NA
41/AA/54:56,1/AA/356:357NA
51/AA/63:66,1/AA/103:104NA
61/AA/67:68A,1/AA/68Y:102NA
71/AA/68D:68F,1/AA/68T:68VNA
81/AA/129:131,1/AA/231:232NA
91/AA/132:136,1/AA/227:230NA
101/AA/148:153,1/AA/168:174NA
111/AA/186:186B,1/AA/186O:191NA
121/AA/242:247,1/AA/277:284NA
131/AA/249:252,1/AA/274:275NA
141/AA/367:369,1/AA/392:393NA
151/AA/371:375,1/AA/389:390NA
161/AA/375:376,1/AA/387:389NA
171/AA/409:416,1/AA/427:433NA
181/AA/446:450,1/AA/483:488NA
191/AA/450:455,1/AA/477:483NA
201/AA/504:511,1/AA/540:541NA
211/AA/515:521,1/AA/528:536NA
221/AA/569:575,1/AA/880:881NA
231/AA/580:584,1/AA/757:761NA
241/AA/594:596,1/AA/644:645NA
251/AA/597:598,1/AA/640:643NA
261/AA/605:612,1/AA/628:633NA
271/AA/654:655,1/AA/751:754NA
281/AA/657:658,1/AA/747:749NA
291/AA/662:666,1/AA/740:743NA
301/AA/673:678,1/AA/712:717NA
311/AA/683:688,1/AA/699:707NA
321/AA/774:778,1/AA/804:805NA
331/AA/779:783,1/AA/799:803NA
341/AA/887:894,1/AA/905:910NA
351/AA/922:923,1/AA/1393:1395NA
361/AA/925:927,1/AA/1390:1391NA
371/AA/933:935,1/AA/1380:1384NA
381/AA/953:954,1/AA/1226:1228NA
391/AA/993:997,1/AA/1044:1045NA
401/AA/1048:1050,1/AA/1208:1209NA
411/AA/1052:1056,1/AA/1204:1206NA
421/AA/1057:1058,1/AA/1199:1203NA
431/AA/1060:1061,1/AA/1195:1197NA
441/AA/1061:1063,1/AA/1193:1195NA
451/AA/1124:1127,1/AA/1145:1149NA
461/AA/1127:1128,1/AA/1143:1145NA
471/AA/1128:1132,1/AA/1142:1143NA
481/AA/1158:1161,1/AA/1175:1181NA
491/AA/1246:1253,1/AA/1284:1291NA
501/AA/1255:1258,1/AA/1277:1282NA
511/AA/1259:1260,1/AA/1274:1276NA
521/AA/1260:1262,1/AA/1273:1274NA
531/AA/1303:1308,1/AA/1329:1334NA
541/AA/1399:1401,1/AA/1501:1504NA
551/AA/1401:1404,1/AA/1497:1501NA
561/AA/1405:1407,1/AA/1494:1496NA
571/AA/1407:1410,1/AA/1490:1494NA
581/AA/1412:1414,1/AA/1486:1488NA
591/AA/1416:1419,1/AA/1481:1484NA
601/AA/1431:1435,1/AA/1466:1469NA
611/AA/1435:1437,1/AA/1464:1466NA
621/AA/1440:1440E,1/AA/1440N:1461NA
631/AW/50:52,1/AW/62:64NA
641/BA/24:30,1/BA/510:516NA
651/BA/36:37,1/BA/442:444NA
661/BA/43:44,1/BA/434:436NA
671/BA/55:56,1/BA/114:115NA
681/BA/81:85,1/BA/97:105NA
691/BA/122:123,1/BA/128:129NA
701/BA/134:135,1/BA/144:145NA
711/BA/154:155,1/BA/171:172NA
721/BA/183:184,1/BA/212:214NA
731/BA/188:194,1/BA/201:208NA
741/BA/239:245,1/BA/253:258NA
751/BA/273A:273B,1/BA/363F:364NA
761/BA/273G:278,1/BA/362:363ANA
771/BA/280:284,1/BA/357:360NA
781/BA/288:290,1/BA/350:353NA
791/BA/293:295,1/BA/343:347NA
801/BA/481:484,1/BA/496:509NA
811/BA/564:566,1/BA/575:577NA
821/BA/606:609B,1/BA/618B:622NA
831/BA/672:674,1/BA/806:808NA
841/BA/674:678,1/BA/799:806NA
851/BA/697:698,1/BA/763:765NA
861/BA/702:703,1/BA/728:730NA
871/BA/703:707,1/BA/724:728NA
881/BA/738:741,1/BA/756:758NA
891/BA/775:777,1/BA/787:791NA
901/BA/837:838,1/BA/940:942NA
911/BA/844:846,1/BA/931:934NA
921/BA/846:850,1/BA/928:931NA
931/BA/858:862,1/BA/915:919NA
941/BA/862:863,1/BA/913:915NA
951/BA/864:868,1/BA/909:912NA
961/BA/875:877,1/BA/899:902NA
971/BA/877:879,1/BA/898:899NA
981/BA/880:881,1/BA/895:897NA
991/BA/952:954,1/BA/963:965NA
1001/BA/994:996,1/BA/1159:1160NA
1011/BA/998:1002,1/BA/1153:1157NA
1021/BA/1004:1011,1/BA/1150:1151NA
1031/BA/1011:1013,1/BA/1149:1150NA
1041/BA/1018:1024,1/BA/1140:1144NA
1051/BA/1024:1030,1/BA/1124:1140NA
1061/BA/1031:1034,1/BA/1121:1123NA
1071/BA/1043:1051,1/BA/1108:1112NA
1081/BA/1196:1198,1/BA/1247:1250NA
1091/BA/1202:1206,1/BA/1240:1243NA
1101/BA/1208:1215,1/BA/1234:1238NA
1111/BA/1219:1221,1/BA/1229:1230NA
1121/BA/1221:1222,1/BA/1227:1229NA
1131/BA/1262:1269,1/BA/2011:2017NA
1141/BA/1310:1313,1/BA/1603:1604NA
1151/BA/1319:1323,1/BA/1331:1333NA
1161/BA/1351:1355,1/BA/1376:1380NA
1171/BA/1357:1361,1/BA/1370:1374NA
1181/BA/1415:1416,1/BA/1582:1587NA
1191/BA/1417:1421,1/BA/1577:1581NA
1201/BA/1433:1435,1/BA/1557:1560NA
1211/BA/1437:1440,1/BA/1551:1555NA
1221/BA/1469:1473,1/BA/1520:1523NA
1231/BA/1481:1483,1/BA/1506:1512NA
1241/BA/1489:1491,1/BA/1499:1500NA
1251/BA/1651:1656,1/BA/2004:2006NA
1261/BA/1663:1665,1/BA/1995:1997NA
1271/BA/1666:1669,1/BA/1993:1994NA
1281/BA/1669:1674,1/BA/1990:1993NA
1291/BA/1686:1691,1/BA/1696:1702NA
1301/BA/1770:1771,1/BA/1980:1982NA
1311/BA/1798:1804,1/BA/1813:1821NA
1321/BA/1837:1840,1/BA/1902:1903NA
1331/BA/1841:1843,1/BA/1897:1901NA
1341/BA/1846:1849,1/BA/1893:1894NA
1351/BA/1851:1855,1/BA/1887:1891NA
1361/BA/1856:1860,1/BA/1882:1886NA
1371/BA/1933:1934,1/BA/1964:1967NA
1381/BA/1934:1945,1/BA/1961:1964NA
1391/BA/2050:2052,1/BA/2617:2618NA
1401/BA/2054:2057,1/BA/2611:2615NA
1411/BA/2067:2069,1/BA/2442:2443NA
1421/BA/2070:2071,1/BA/2438:2441NA
1431/BA/2081:2083,1/BA/2236:2239NA
1441/BA/2085:2087,1/BA/2232:2234NA
1451/BA/2297:2299,1/BA/2317:2321NA
1461/BA/2350:2353,1/BA/2364:2367NA
1471/BA/2401:2403,1/BA/2414:2415NA
1481/BA/2453:2454,1/BA/2498:2500NA
1491/BA/2454:2455,1/BA/2496:2498NA
1501/BA/2457:2461,1/BA/2489:2494NA
1511/BA/2466:2470,1/BA/2480:2484NA
1521/BA/2507:2508,1/BA/2580:2582NA
1531/BA/2510:2512,1/BA/2574:2578NA
1541/BA/2512:2513,1/BA/2571:2574NA
1551/BA/2522:2523,1/BA/2540:2543NA
1561/BA/2591:2592,1/BA/2601:2603NA
1571/BA/2636:2640,1/BA/2774:2782NA
1581/BA/2652:2658,1/BA/2663:2668NA
1591/BA/2680:2684,1/BA/2725:2727NA
1601/BA/2687:2691,1/BA/2718:2722NA
1611/BA/2695:2696,1/BA/2711:2714NA
1621/BA/2737:2742,1/BA/2762:2767NA
1631/BA/2838:2839,1/BA/2878:2880NA
1641/BA/2843:2846,1/BA/2870:2874NA
1651/BA/2847:2852,1/BA/2865:2869NA
1661/BB/8:10,1/BB/110:112NA
1671/BB/17:18,1/BB/65:67NA
1681/BB/23:28,1/BB/56:60NA
1691/BB/30:31,1/BB/51:54NA
1701/BB/34:38,1/BB/44:48NA
1711/BB/71:79,1/BB/97:105NA
1721/BB/80:82,1/BB/94:96NA
1731/CA/30:33,1/CA/551:553NA
1741/CA/44:45,1/CA/396:398NA
1751/CA/47:52,1/CA/359:361NA
1761/CA/54:56,1/CA/356:357NA
1771/CA/63:66,1/CA/103:104NA
1781/CA/67:68A,1/CA/68Y:102NA
1791/CA/68A:68C,1/CA/68W:68YNA
1801/CA/68D:68F,1/CA/68T:68VNA
1811/CA/129:131,1/CA/231:232NA
1821/CA/132:136,1/CA/227:230NA
1831/CA/148:153,1/CA/168:174NA
1841/CA/186:186B,1/CA/186O:191NA
1851/CA/242:247,1/CA/277:284NA
1861/CA/249:252,1/CA/274:275NA
1871/CA/292:293,1/CA/304:308NA
1881/CA/367:369,1/CA/392:393NA
1891/CA/371:375,1/CA/389:390NA
1901/CA/375:376,1/CA/387:389NA
1911/CA/409:417,1/CA/426:433NA
1921/CA/446:450,1/CA/483:488NA
1931/CA/450:455,1/CA/477:483NA
1941/CA/504:511,1/CA/540:541NA
1951/CA/515:521,1/CA/528:536NA
1961/CA/569:575,1/CA/880:881NA
1971/CA/580:584,1/CA/757:761NA
1981/CA/594:596,1/CA/644:645NA
1991/CA/597:598,1/CA/640:643NA
2001/CA/605:612,1/CA/628:633NA
2011/CA/654:655,1/CA/751:754NA
2021/CA/657:658,1/CA/747:749NA
2031/CA/662:666,1/CA/740:743NA
2041/CA/673:678,1/CA/712:717NA
2051/CA/683:688,1/CA/699:707NA
2061/CA/774:778,1/CA/804:805NA
2071/CA/779:783,1/CA/799:803NA
2081/CA/887:894,1/CA/905:910NA
2091/CA/933:935,1/CA/1380:1384NA
2101/CA/952:954,1/CA/1226:1229NA
2111/CA/1048:1050,1/CA/1208:1209NA
2121/CA/1052:1056,1/CA/1204:1206NA
2131/CA/1057:1058,1/CA/1199:1203NA
2141/CA/1061:1063,1/CA/1193:1195NA
2151/CA/1124:1127,1/CA/1145:1149NA
2161/CA/1127:1128,1/CA/1143:1145NA
2171/CA/1128:1132,1/CA/1142:1143NA
2181/CA/1158:1161,1/CA/1175:1181NA
2191/CA/1246:1253,1/CA/1284:1291NA
2201/CA/1255:1258,1/CA/1277:1282NA
2211/CA/1259:1260,1/CA/1274:1276NA
2221/CA/1260:1262,1/CA/1273:1274NA
2231/CA/1303:1308,1/CA/1329:1334NA
2241/CA/1399:1401,1/CA/1501:1504NA
2251/CA/1401:1404,1/CA/1497:1501NA
2261/CA/1405:1407,1/CA/1494:1496NA
2271/CA/1407:1410,1/CA/1490:1494NA
2281/CA/1412:1414,1/CA/1486:1488NA
2291/CA/1416:1419,1/CA/1481:1484NA
2301/CA/1431:1435,1/CA/1466:1469NA
2311/CA/1435:1437,1/CA/1464:1466NA
2321/CA/1440:1440E,1/CA/1440N:1461NA
2331/CW/50:52,1/CW/62:64NA
2341/DA/24:30,1/DA/510:516NA
2351/DA/36:37,1/DA/442:444NA
2361/DA/43:44,1/DA/434:436NA
2371/DA/55:56,1/DA/114:115NA
2381/DA/81:85,1/DA/97:105NA
2391/DA/122:123,1/DA/128:129NA
2401/DA/134:135,1/DA/144:145NA
2411/DA/154:155,1/DA/171:172NA
2421/DA/183:184,1/DA/212:214NA
2431/DA/188:194,1/DA/201:208NA
2441/DA/239:245,1/DA/253:258NA
2451/DA/273A:273B,1/DA/363F:364NA
2461/DA/273G:278,1/DA/362:363ANA
2471/DA/280:284,1/DA/357:360NA
2481/DA/288:291,1/DA/349:353NA
2491/DA/293:295,1/DA/343:347NA
2501/DA/481:484,1/DA/496:509NA
2511/DA/564:566,1/DA/575:577NA
2521/DA/606:609B,1/DA/618B:622NA
2531/DA/672:674,1/DA/806:808NA
2541/DA/674:678,1/DA/799:806NA
2551/DA/697:698,1/DA/763:765NA
2561/DA/702:703,1/DA/728:730NA
2571/DA/703:707,1/DA/724:728NA
2581/DA/738:741,1/DA/756:758NA
2591/DA/775:777,1/DA/787:791NA
2601/DA/837:838,1/DA/940:942NA
2611/DA/844:846,1/DA/931:934NA
2621/DA/846:850,1/DA/928:931NA
2631/DA/858:862,1/DA/915:919NA
2641/DA/862:863,1/DA/913:915NA
2651/DA/864:868,1/DA/909:912NA
2661/DA/870:872,1/DA/905:907NA
2671/DA/875:877,1/DA/899:902NA
2681/DA/877:879,1/DA/898:899NA
2691/DA/880:881,1/DA/895:897NA
2701/DA/952:954,1/DA/963:965NA
2711/DA/994:996,1/DA/1159:1160NA
2721/DA/998:1002,1/DA/1153:1157NA
2731/DA/1004:1011,1/DA/1150:1151NA
2741/DA/1011:1013,1/DA/1149:1150NA
2751/DA/1018:1024,1/DA/1140:1144NA
2761/DA/1024:1030,1/DA/1124:1140NA
2771/DA/1031:1034,1/DA/1121:1123NA
2781/DA/1043:1051,1/DA/1108:1112NA
2791/DA/1197:1198,1/DA/1247:1249NA
2801/DA/1202:1206,1/DA/1240:1243NA
2811/DA/1208:1216,1/DA/1233:1238NA
2821/DA/1219:1221,1/DA/1229:1230NA
2831/DA/1221:1222,1/DA/1227:1229NA
2841/DA/1262:1269,1/DA/2011:2017NA
2851/DA/1310:1313,1/DA/1603:1604NA
2861/DA/1319:1323,1/DA/1331:1333NA
2871/DA/1351:1355,1/DA/1376:1380NA
2881/DA/1357:1361,1/DA/1370:1374NA
2891/DA/1415:1416,1/DA/1582:1587NA
2901/DA/1417:1421,1/DA/1577:1581NA
2911/DA/1433:1435,1/DA/1557:1560NA
2921/DA/1437:1440,1/DA/1551:1555NA
2931/DA/1469:1473,1/DA/1520:1523NA
2941/DA/1481:1483,1/DA/1506:1512NA
2951/DA/1489:1491,1/DA/1499:1500NA
2961/DA/1651:1656,1/DA/2004:2006NA
2971/DA/1663:1665,1/DA/1995:1997NA
2981/DA/1666:1669,1/DA/1993:1994NA
2991/DA/1669:1674,1/DA/1990:1993NA
3001/DA/1686:1691,1/DA/1696:1702NA
3011/DA/1770:1771,1/DA/1980:1982NA
3021/DA/1798:1804,1/DA/1813:1821NA
3031/DA/1837:1840,1/DA/1902:1903NA
3041/DA/1841:1843,1/DA/1897:1901NA
3051/DA/1846:1849,1/DA/1893:1894NA
3061/DA/1851:1855,1/DA/1887:1891NA
3071/DA/1856:1860,1/DA/1882:1886NA
3081/DA/1933:1934,1/DA/1964:1967NA
3091/DA/1934:1945,1/DA/1961:1964NA
3101/DA/2050:2052,1/DA/2617:2618NA
3111/DA/2054:2057,1/DA/2611:2615NA
3121/DA/2067:2069,1/DA/2442:2443NA
3131/DA/2070:2071,1/DA/2438:2441NA
3141/DA/2081:2083,1/DA/2236:2239NA
3151/DA/2085:2087,1/DA/2232:2234NA
3161/DA/2297:2299,1/DA/2317:2321NA
3171/DA/2350:2353,1/DA/2364:2367NA
3181/DA/2401:2403,1/DA/2414:2415NA
3191/DA/2453:2454,1/DA/2498:2500NA
3201/DA/2454:2455,1/DA/2496:2498NA
3211/DA/2457:2459,1/DA/2493:2494NA
3221/DA/2459:2461,1/DA/2489:2493NA
3231/DA/2466:2470,1/DA/2480:2484NA
3241/DA/2507:2508,1/DA/2580:2582NA
3251/DA/2510:2512,1/DA/2574:2578NA
3261/DA/2512:2513,1/DA/2571:2574NA
3271/DA/2522:2523,1/DA/2540:2543NA
3281/DA/2591:2592,1/DA/2601:2603NA
3291/DA/2636:2640,1/DA/2774:2782NA
3301/DA/2652:2658,1/DA/2663:2668NA
3311/DA/2680:2684,1/DA/2725:2727NA
3321/DA/2687:2691,1/DA/2718:2722NA
3331/DA/2695:2696,1/DA/2711:2714NA
3341/DA/2737:2742,1/DA/2762:2767NA
3351/DA/2838:2839,1/DA/2878:2880NA
3361/DA/2843:2845,1/DA/2871:2874NA
3371/DA/2847:2852,1/DA/2865:2869NA
3381/DB/17:18,1/DB/65:67NA
3391/DB/23:28,1/DB/56:60NA
3401/DB/30:31,1/DB/51:54NA
3411/DB/34:38,1/DB/44:48NA
3421/DB/71:79,1/DB/97:105NA
3431/DB/80:82,1/DB/94:96NA

Problematic loops

#loop idProblemSequence
1AAC,GUU
2292, 293, 304, 305, 306, 307, 308
3GAG,CUC
4GUCGUG,CC
51059, 1060, 1061, 1062, 1076, 1077, 1078, 1079
61087, 1088, 1089, 1090, 1091, 1100, 1101, 1102
72108, 2109, 2110, 2179, 2180, 2181
82110, 2111, 2112, 2113, 2114, 2115, 2116, 2117, 2118, 2119, 2120, 2178, 2179
92124, 2125, 2126, 2127, 2161, 2162, 2163, 2164, 2165, 2166, 2167, 2168, 2169, 2170, 2171, 2172, 2173, 2174
102129, 2130, 2131, 2132, 2133, 2134, 2135, 2136, 2155, 2156, 2157, 2158, 2159
11CUG,CAG
12GAG,CUC
13922, 923, 1393, 1394, 1395
14925, 926, 927, 1390, 1391
151060, 1061, 1195, 1196, 1197
16UAG,CUA
17GUCGUG,CC
18GGC,GCC
191059, 1060, 1061, 1062, 1076, 1077, 1078, 1079
201087, 1088, 1089, 1090, 1091, 1100, 1101, 1102
21CUA,UAG
222108, 2109, 2110, 2179, 2180, 2181
232110, 2111, 2112, 2113, 2114, 2115, 2116, 2117, 2118, 2119, 2120, 2178, 2179
242124, 2125, 2126, 2127, 2161, 2162, 2163, 2164, 2165, 2166, 2167, 2168, 2169, 2170, 2171, 2172, 2173, 2174
252129, 2130, 2131, 2132, 2133, 2134, 2135, 2136, 2155, 2156, 2157, 2158, 2159

Valid loops

#loop idlocationmotif
11/AA/12:22NA
21/AA/68J:68PNA
31/AA/158:163NA
41/AA/186F:186KNA
51/AA/201:216NA
61/AA/259:267NA
71/AA/296:301NA
81/AA/320:333NA
91/AA/342:347NA
101/AA/379:384NA
111/AA/419:424NA
121/AA/458:474NA
131/AA/522:527NA
141/AA/617:623NA
151/AA/689:698NA
161/AA/726:731NA
171/AA/786:796NA
181/AA/838:848NA
191/AA/862:867NA
201/AA/897:902NA
211/AA/963:972NA
221/AA/1012:1017NA
231/AA/1028B:1028GNA
241/AA/1076:1081NA
251/AA/1089:1096NA
261/AA/1134:1140NA
271/AA/1165:1171NA
281/AA/1265:1270NA
291/AA/1314:1323NA
301/AA/1356:1366NA
311/AA/1440G:1440LNA
321/AA/1515:1520NA
331/AW/12:23NA
341/AW/31:39NA
351/AW/53:61NA
361/BA/59:68NA
371/BA/87:95NA
381/BA/123:128NA
391/BA/137B:141BNA
401/BA/155:171NA
411/BA/194:201NA
421/BA/225:230NA
431/BA/246:252NA
441/BA/270K:270QNA
451/BA/305:312NA
461/BA/319:323NA
471/BA/327:335NA
481/BA/382:392NA
491/BA/410:417NA
501/BA/462:467NA
511/BA/487:493NA
521/BA/544:549NA
531/BA/566:575NA
541/BA/611:617NA
551/BA/629:634NA
561/BA/641:647NA
571/BA/712:719NA
581/BA/744:753NA
591/BA/779:785NA
601/BA/826:831NA
611/BA/884:892NA
621/BA/955:962NA
631/BA/978:985NA
641/BA/1171:1178NA
651/BA/1222:1227NA
661/BA/1281:1289NA
671/BA/1324:1330NA
681/BA/1363:1368NA
691/BA/1389:1398NA
701/BA/1450:1461NA
711/BA/1492:1498NA
721/BA/1533:1538NA
731/BA/1565:1568NA
741/BA/1612:1619NA
751/BA/1630:1636NA
761/BA/1691:1696NA
771/BA/1727:1733NA
781/BA/1752:1756NA
791/BA/1777:1787NA
801/BA/1806:1811NA
811/BA/1864:1878NA
821/BA/1910:1920NA
831/BA/1949:1957NA
841/BA/2027:2036NA
851/BA/2209:2215NA
861/BA/2248:2256NA
871/BA/2264:2276NA
881/BA/2304:2312NA
891/BA/2324:2331NA
901/BA/2355:2362NA
911/BA/2374:2379NA
921/BA/2404:2413NA
931/BA/2471:2479NA
941/BA/2528:2535NA
951/BA/2551:2557NA
961/BA/2594:2599NA
971/BA/2658:2663NA
981/BA/2701:2706NA
991/BA/2745:2759NA
1001/BA/2794:2802NA
1011/BA/2819:2827NA
1021/BA/2856:2861NA
1031/BB/38:44NA
1041/BB/86:90NA
1051/CA/12:22NA
1061/CA/68J:68PNA
1071/CA/158:163NA
1081/CA/186F:186KNA
1091/CA/201:216NA
1101/CA/259:267NA
1111/CA/296:301NA
1121/CA/320:333NA
1131/CA/342:347NA
1141/CA/379:384NA
1151/CA/419:424NA
1161/CA/458:474NA
1171/CA/522:527NA
1181/CA/617:623NA
1191/CA/689:698NA
1201/CA/726:731NA
1211/CA/786:796NA
1221/CA/838:848NA
1231/CA/862:867NA
1241/CA/897:902NA
1251/CA/963:972NA
1261/CA/1012:1017NA
1271/CA/1028B:1028GNA
1281/CA/1076:1081NA
1291/CA/1089:1096NA
1301/CA/1134:1140NA
1311/CA/1165:1171NA
1321/CA/1265:1270NA
1331/CA/1314:1323NA
1341/CA/1356:1366NA
1351/CA/1440G:1440LNA
1361/CA/1515:1520NA
1371/CW/12:23NA
1381/CW/31:39NA
1391/CW/53:61NA
1401/DA/59:68NA
1411/DA/87:95NA
1421/DA/123:128NA
1431/DA/137B:141BNA
1441/DA/155:171NA
1451/DA/194:201NA
1461/DA/225:230NA
1471/DA/246:252NA
1481/DA/270K:270QNA
1491/DA/305:312NA
1501/DA/319:323NA
1511/DA/327:335NA
1521/DA/383:391NA
1531/DA/410:417NA
1541/DA/462:467NA
1551/DA/487:493NA
1561/DA/544:549NA
1571/DA/566:575NA
1581/DA/611:617NA
1591/DA/629:634NA
1601/DA/641:647NA
1611/DA/712:719NA
1621/DA/744:753NA
1631/DA/779:785NA
1641/DA/826:831NA
1651/DA/884:892NA
1661/DA/955:962NA
1671/DA/978:985NA
1681/DA/1171:1178NA
1691/DA/1222:1227NA
1701/DA/1281:1289NA
1711/DA/1324:1330NA
1721/DA/1363:1368NA
1731/DA/1389:1398NA
1741/DA/1450:1461NA
1751/DA/1492:1498NA
1761/DA/1533:1538NA
1771/DA/1565:1568NA
1781/DA/1612:1619NA
1791/DA/1630:1636NA
1801/DA/1691:1696NA
1811/DA/1727:1733NA
1821/DA/1752:1756NA
1831/DA/1777:1787NA
1841/DA/1806:1811NA
1851/DA/1864:1878NA
1861/DA/1910:1920NA
1871/DA/1949:1957NA
1881/DA/2027:2036NA
1891/DA/2209:2215NA
1901/DA/2248:2256NA
1911/DA/2264:2276NA
1921/DA/2303:2313NA
1931/DA/2324:2331NA
1941/DA/2355:2362NA
1951/DA/2374:2379NA
1961/DA/2404:2413NA
1971/DA/2471:2479NA
1981/DA/2528:2535NA
1991/DA/2551:2557NA
2001/DA/2594:2599NA
2011/DA/2658:2663NA
2021/DA/2701:2706NA
2031/DA/2745:2759NA
2041/DA/2794:2802NA
2051/DA/2819:2827NA
2061/DA/2856:2861NA
2071/DB/38:44NA
2081/DB/86:90NA

Problematic loops

#loop idProblemSequence
11064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074
21092, 1093, 1094, 1095, 1096, 1097, 1098, 1099
32143, 2144, 2145, 2146, 2147, 2148
41064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074
51092, 1093, 1094, 1095, 1096, 1097, 1098, 1099
62143, 2144, 2145, 2146, 2147, 2148

Valid loops

#loop idlocationmotif
11/AA/826:829,1/AA/857:861,1/AA/868:874NA
21/AA/943:946,1/AA/1235:1237,1/AA/1337:1340NA
31/AA/955:962,1/AA/973:984,1/AA/1221:1225NA
41/AA/990:993,1/AA/1045:1047,1/AA/1210:1215NA
51/AA/1003:1006,1/AA/1023:1027,1/AA/1034:1037NA
61/AA/1063:1068,1/AA/1107:1113,1/AA/1187:1193NA
71/AA/1116:1118,1/AA/1155:1158,1/AA/1181:1184NA
81/AA/1237:1241,1/AA/1296:1303,1/AA/1334:1337NA
91/BA/683:689,1/BA/773:775,1/BA/791:794NA
101/BA/698:700,1/BA/732:736,1/BA/760:763NA
111/BA/1298:1303,1/BA/1625:1627,1/BA/1639:1642NA
121/BA/1306:1309,1/BA/1605:1611,1/BA/1620:1622NA
131/BA/2091:2093,1/BA/2196:2205,1/BA/2219:2228NA
141/BA/2295:2297,1/BA/2321:2323,1/BA/2332:2337NA
151/BA/2517:2520,1/BA/2545:2547,1/BA/2561:2567NA
161/CA/826:829,1/CA/857:861,1/CA/868:874NA
171/CA/943:946,1/CA/1235:1237,1/CA/1337:1340NA
181/CA/955:962,1/CA/973:984,1/CA/1221:1225NA
191/CA/990:997,1/CA/1044:1047,1/CA/1210:1215NA
201/CA/1003:1006,1/CA/1023:1027,1/CA/1034:1037NA
211/CA/1063:1068,1/CA/1107:1113,1/CA/1187:1193NA
221/CA/1116:1118,1/CA/1155:1158,1/CA/1181:1184NA
231/CA/1237:1241,1/CA/1296:1303,1/CA/1334:1337NA
241/DA/683:689,1/DA/773:775,1/DA/791:794NA
251/DA/698:700,1/DA/732:736,1/DA/760:763NA
261/DA/1298:1303,1/DA/1625:1627,1/DA/1639:1642NA
271/DA/1306:1309,1/DA/1605:1611,1/DA/1620:1622NA
281/DA/2091:2093,1/DA/2196:2205,1/DA/2219:2228NA
291/DA/2295:2297,1/DA/2321:2323,1/DA/2332:2337NA
301/DA/2517:2520,1/DA/2545:2547,1/DA/2561:2567NA

Problematic loops

#loop idProblemSequence
11055, 1056, 1057, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1102, 1103, 1104
21055, 1056, 1057, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1102, 1103, 1104

Coloring options: