Valid loops

#loop idlocationmotif
11/A/24:30,1/A/510:516NA
21/A/36:37,1/A/442:444NA
31/A/42:43,1/A/434:436NA
41/A/81:85,1/A/97:105NA
51/A/183:184,1/A/212:214NA
61/A/188:194,1/A/201:208NA
71/A/239:245,1/A/253:258NA
81/A/272D:272E,1/A/363E:364NA
91/A/280:284,1/A/357:360NA
101/A/288:290,1/A/350:353NA
111/A/293:295,1/A/343:347NA
121/A/481:484,1/A/496:509NA
131/A/564:566,1/A/575:577NA
141/A/606:610,1/A/618:622NA
151/A/672:674,1/A/806:808NA
161/A/674:678,1/A/799:806NA
171/A/697:698,1/A/763:765NA
181/A/702:703,1/A/728:730NA
191/A/703:707,1/A/724:728NA
201/A/738:741,1/A/756:758NA
211/A/775:777,1/A/787:791NA
221/A/837:838,1/A/940:942NA
231/A/844:846,1/A/931:934NA
241/A/846:850,1/A/927:931NA
251/A/857:862,1/A/915:920NA
261/A/862:863,1/A/913:915NA
271/A/864:868,1/A/909:912NA
281/A/870:872,1/A/905:907NA
291/A/875:879,1/A/898:902NA
301/A/880:881,1/A/895:897NA
311/A/952:954,1/A/963:965NA
321/A/994:996,1/A/1159:1160NA
331/A/998:1002,1/A/1153:1157NA
341/A/1004:1011,1/A/1150:1151NA
351/A/1011:1013,1/A/1149:1150NA
361/A/1018:1024,1/A/1140:1144NA
371/A/1024:1030,1/A/1124:1140NA
381/A/1031:1034,1/A/1121:1123NA
391/A/1040:1042,1/A/1113:1115NA
401/A/1196:1198,1/A/1247:1250NA
411/A/1202:1206,1/A/1240:1243NA
421/A/1208:1215,1/A/1234:1238NA
431/A/1219:1221,1/A/1229:1230NA
441/A/1262:1269,1/A/2011:2017NA
451/A/1310:1313,1/A/1603:1604NA
461/A/1319:1323,1/A/1331:1333NA
471/A/1351:1355,1/A/1376:1380NA
481/A/1357:1361,1/A/1370:1374NA
491/A/1415:1416,1/A/1582:1587NA
501/A/1417:1421,1/A/1577:1581NA
511/A/1433:1435,1/A/1557:1560NA
521/A/1437:1440,1/A/1551:1555NA
531/A/1448:1450,1/A/1462:1463NA
541/A/1450A:1451,1/A/1459:1461NA
551/A/1469:1473,1/A/1518:1523NA
561/A/1480:1482,1/A/1506:1511NA
571/A/1489:1491,1/A/1499:1500NA
581/A/1651:1656,1/A/2004:2006NA
591/A/1663:1665,1/A/1995:1997NA
601/A/1666:1669,1/A/1993:1994NA
611/A/1669:1674,1/A/1990:1993NA
621/A/1686:1691,1/A/1696:1702NA
631/A/1770:1771,1/A/1980:1982NA
641/A/1798:1804,1/A/1813:1821NA
651/A/1837:1840,1/A/1902:1903NA
661/A/1841:1842,1/A/1898:1901NA
671/A/1846:1849,1/A/1893:1894NA
681/A/1851:1855,1/A/1887:1891NA
691/A/1856:1860,1/A/1882:1886NA
701/A/1933:1934,1/A/1964:1967NA
711/A/1934:1945,1/A/1961:1964NA
721/A/2050:2052,1/A/2617:2618NA
731/A/2054:2057,1/A/2611:2615NA
741/A/2067:2069,1/A/2442:2443NA
751/A/2070:2071,1/A/2438:2441NA
761/A/2081:2083,1/A/2236:2239NA
771/A/2085:2087,1/A/2232:2234NA
781/A/2297:2299,1/A/2317:2321NA
791/A/2350:2353,1/A/2364:2367NA
801/A/2401:2403,1/A/2414:2415NA
811/A/2453:2454,1/A/2498:2500NA
821/A/2454:2455,1/A/2496:2498NA
831/A/2456:2459,1/A/2493:2495NA
841/A/2459:2461,1/A/2489:2493NA
851/A/2466:2470,1/A/2480:2484NA
861/A/2507:2508,1/A/2580:2582NA
871/A/2510:2512,1/A/2574:2578NA
881/A/2512:2513,1/A/2571:2574NA
891/A/2522:2523,1/A/2540:2543NA
901/A/2591:2592,1/A/2601:2603NA
911/A/2636:2640,1/A/2774:2782NA
921/A/2652:2658,1/A/2663:2668NA
931/A/2680:2684,1/A/2725:2727NA
941/A/2685:2687,1/A/2722:2724NA
951/A/2687:2691,1/A/2718:2722NA
961/A/2695:2696,1/A/2711:2714NA
971/A/2737:2742,1/A/2762:2767NA
981/A/2838:2839,1/A/2878:2880NA
991/A/2843:2846,1/A/2870:2874NA
1001/A/2847:2852,1/A/2865:2869NA
1011/B/17:18,1/B/65:67NA
1021/B/23:28,1/B/56:60NA
1031/B/30:32,1/B/50:54NA
1041/B/34:38,1/B/44:48NA
1051/B/71:79,1/B/98:106NA
1061/a/30:32,1/a/552:553NA
1071/a/44:45,1/a/396:398NA
1081/a/47:52,1/a/359:361NA
1091/a/54:56,1/a/356:357NA
1101/a/63:66,1/a/103:104NA
1111/a/67:69,1/a/100:102NA
1121/a/73:77,1/a/92:96NA
1131/a/77:79,1/a/90:92NA
1141/a/129:131,1/a/231:232NA
1151/a/132:137,1/a/226:230NA
1161/a/148:153,1/a/168:174NA
1171/a/186:188,1/a/189L:191NA
1181/a/242:247,1/a/277:284NA
1191/a/249:252,1/a/274:275NA
1201/a/292:293,1/a/304:308NA
1211/a/367:369,1/a/392:393NA
1221/a/371:375,1/a/389:390NA
1231/a/375:376,1/a/387:389NA
1241/a/409:416,1/a/427:433NA
1251/a/446:450,1/a/483:488NA
1261/a/450:455,1/a/476:483NA
1271/a/504:511,1/a/540:541NA
1281/a/515:521,1/a/528:536NA
1291/a/569:575,1/a/880:881NA
1301/a/580:584,1/a/757:761NA
1311/a/594:596,1/a/644:645NA
1321/a/597:598,1/a/640:643NA
1331/a/605:612,1/a/628:633NA
1341/a/654:655,1/a/751:754NA
1351/a/657:658,1/a/747:749NA
1361/a/662:666,1/a/740:743NA
1371/a/673:679,1/a/711:717NA
1381/a/683:688,1/a/699:707NA
1391/a/774:778,1/a/804:805NA
1401/a/779:783,1/a/799:803NA
1411/a/887:894,1/a/905:910NA
1421/a/922:923,1/a/1393:1395NA
1431/a/925:927,1/a/1390:1391NA
1441/a/933:935,1/a/1380:1384NA
1451/a/953:954,1/a/1226:1228NA
1461/a/993:997,1/a/1044:1045NA
1471/a/1048:1050,1/a/1208:1209NA
1481/a/1052:1056,1/a/1204:1206NA
1491/a/1057:1058,1/a/1199:1203NA
1501/a/1060:1061,1/a/1195:1197NA
1511/a/1061:1063,1/a/1193:1195NA
1521/a/1124:1128,1/a/1143:1149NA
1531/a/1128:1132,1/a/1142:1143NA
1541/a/1247:1253,1/a/1284:1290NA
1551/a/1255:1258,1/a/1277:1282NA
1561/a/1259:1260,1/a/1274:1276NA
1571/a/1260:1262,1/a/1273:1274NA
1581/a/1303:1308,1/a/1329:1334NA
1591/a/1399:1401,1/a/1501:1504NA
1601/a/1401:1404,1/a/1497:1501NA
1611/a/1405:1407,1/a/1494:1496NA
1621/a/1407:1409,1/a/1491:1494NA
1631/a/1412:1414,1/a/1486:1488NA
1641/a/1416:1419,1/a/1481:1484NA
1651/a/1431:1435,1/a/1466:1469NA
1661/a/1435:1437,1/a/1464:1466NA
1671/a/1440:1443,1/a/1459:1461NA

Problematic loops

#loop idProblemSequence
1272, 274, 275, 278, 362, 363
2CCC,GGG
3CAC,GUG
4GCG,CGC
51043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1052, 1053, 1054, 1055, 1104, 1105, 1106, 1107, 1108, 1109, 1110, 1111, 1112
61087, 1088, 1089, 1090, 1091, 1100, 1101, 1102
71526, 1527, 1528, 1528, 1529, 1540, 1541, 1542, 1543, 1544, 1545, 1546
8GGG,CCC
92101, 2102, 2103, 2186, 2187, 2188
10GCG,CGC
112107, 2108, 2109, 2110, 2179, 2180, 2181, 2182
122110, 2111, 2112, 2113, 2114, 2115, 2116, 2117, 2118, 2119, 2120, 2121, 2177, 2178, 2179
132124, 2125, 2126, 2127, 2161, 2162, 2163, 2164, 2165, 2166, 2167, 2168, 2169, 2170, 2171, 2172, 2173, 2174
142129, 2130, 2131, 2132, 2133, 2134, 2135, 2136, 2155, 2156, 2157, 2158, 2159
152140, 2141, 2142, 2149, 2150, 2151
16GGC,GCC

Valid loops

#loop idlocationmotif
11/A/59:68NA
21/A/87:95NA
31/A/123:128NA
41/A/139:142ANA
51/A/194:201NA
61/A/225:230NA
71/A/246:252NA
81/A/271I:271ONA
91/A/305:312NA
101/A/319:323NA
111/A/327:335NA
121/A/382:392NA
131/A/410:417NA
141/A/462:467NA
151/A/487:493NA
161/A/566:575NA
171/A/612:615NA
181/A/629:634NA
191/A/641:647NA
201/A/712:719NA
211/A/744:753NA
221/A/779:785NA
231/A/826:831NA
241/A/955:962NA
251/A/978:985NA
261/A/1222:1227NA
271/A/1281:1289NA
281/A/1324:1330NA
291/A/1363:1368NA
301/A/1389:1398NA
311/A/1451:1459NA
321/A/1492:1498NA
331/A/1565:1568NA
341/A/1612:1619NA
351/A/1631:1635NA
361/A/1691:1696NA
371/A/1720:1742NA
381/A/1752:1756NA
391/A/1777:1787NA
401/A/1806:1811NA
411/A/1864:1878NA
421/A/1910:1920NA
431/A/1949:1957NA
441/A/2027:2036NA
451/A/2248:2256NA
461/A/2264:2276NA
471/A/2303:2313NA
481/A/2324:2331NA
491/A/2355:2362NA
501/A/2374:2379NA
511/A/2404:2413NA
521/A/2471:2479NA
531/A/2528:2535NA
541/A/2551:2557NA
551/A/2594:2599NA
561/A/2658:2663NA
571/A/2701:2706NA
581/A/2745:2759NA
591/A/2819:2827NA
601/A/2856:2861NA
611/B/38:44NA
621/B/86:91NA
631/a/12:22NA
641/a/158:163NA
651/a/189C:189HNA
661/a/201:216NA
671/a/259:267NA
681/a/296:301NA
691/a/320:333NA
701/a/342:347NA
711/a/379:384NA
721/a/419:424NA
731/a/458:473NA
741/a/522:527NA
751/a/617:623NA
761/a/689:698NA
771/a/726:731NA
781/a/786:796NA
791/a/838:848NA
801/a/862:867NA
811/a/897:902NA
821/a/963:972NA
831/a/1012:1017NA
841/a/1029:1033NA
851/a/1076:1081NA
861/a/1089:1096NA
871/a/1134:1140NA
881/a/1165:1171NA
891/a/1265:1270NA
901/a/1314:1323NA
911/a/1356:1366NA
921/a/1444:1458NA
931/a/1515:1520NA
941/w/13:22NA
951/w/30:40NA
961/w/53:61NA
971/x/30:40NA
981/x/53:61NA

Problematic loops

#loop idProblemSequence
1154, 154, 171, 172
2543, 545, 546, 548, 549
3884, 885, 886, 887, 888, 889, 890, 892
41064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074
51092, 1093, 1094, 1095, 1096, 1097, 1098, 1099
61169, 1170, 1171, 1173, 1174, 1175, 1176, 1177, 1178, 1179, 1180
72143, 2144, 2145, 2146, 2147, 2148
82205, 2206, 2207, 2208, 2218, 2219
92794, 2801, 2802
1013, 14, 15, 18, 19, 20, 21, 22

Valid loops

#loop idlocationmotif
11/A/683:689,1/A/773:775,1/A/791:794NA
21/A/698:700,1/A/732:736,1/A/760:763NA
31/A/1298:1303,1/A/1625:1627,1/A/1639:1642NA
41/A/1306:1309,1/A/1605:1611,1/A/1620:1622NA
51/A/2091:2093,1/A/2196:2200,1/A/2223:2228NA
61/A/2295:2297,1/A/2321:2323,1/A/2332:2337NA
71/A/2517:2520,1/A/2545:2547,1/A/2561:2567NA
81/B/11:16,1/B/68:70,1/B/107:110NA
91/a/826:829,1/a/857:861,1/a/868:874NA
101/a/936:939,1/a/1344:1350,1/a/1372:1379NA
111/a/943:946,1/a/1235:1237,1/a/1337:1340NA
121/a/955:962,1/a/973:984,1/a/1221:1225NA
131/a/990:993,1/a/1045:1047,1/a/1210:1215NA
141/a/1002:1006,1/a/1023:1029,1/a/1033:1038NA
151/a/1063:1068,1/a/1107:1113,1/a/1187:1193NA
161/a/1116:1118,1/a/1155:1161,1/a/1175:1184NA
171/a/1237:1241,1/a/1296:1303,1/a/1334:1337NA

Problematic loops

#loop idProblemSequence
11055, 1056, 1057, 1058, 1059, 1060, 1061, 1062, 1076, 1077, 1078, 1079, 1080, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1102, 1103, 1104
22789, 2790, 2791, 2792, 2804, 2805, 2807, 2808, 2809, 2810, 2811, 2889, 2891, 2892, 2894

Coloring options: