Valid loops

#loop idlocationmotif
11/QA/30:32,1/QA/552:553NA
21/QA/44:45,1/QA/396:398NA
31/QA/47:52,1/QA/359:361NA
41/QA/54:56,1/QA/356:357NA
51/QA/67:69,1/QA/99:102NA
61/QA/129:131,1/QA/231:232NA
71/QA/132:136,1/QA/227:230NA
81/QA/148:153,1/QA/168:174NA
91/QA/185:186B,1/QA/191E:192NA
101/QA/242:247,1/QA/277:284NA
111/QA/249:252,1/QA/274:275NA
121/QA/292:293,1/QA/304:308NA
131/QA/367:369,1/QA/392:393NA
141/QA/371:375,1/QA/389:390NA
151/QA/375:376,1/QA/387:389NA
161/QA/409:416,1/QA/427:433NA
171/QA/446:450,1/QA/483:488NA
181/QA/450:455,1/QA/477:483NA
191/QA/504:511,1/QA/540:541NA
201/QA/515:521,1/QA/528:536NA
211/QA/569:575,1/QA/880:881NA
221/QA/580:584,1/QA/757:761NA
231/QA/594:596,1/QA/644:645NA
241/QA/597:598,1/QA/640:643NA
251/QA/605:612,1/QA/628:633NA
261/QA/654:655,1/QA/751:754NA
271/QA/657:658,1/QA/747:749NA
281/QA/662:666,1/QA/740:743NA
291/QA/673:678,1/QA/712:717NA
301/QA/683:688,1/QA/699:707NA
311/QA/774:778,1/QA/804:805NA
321/QA/779:783,1/QA/799:803NA
331/QA/887:894,1/QA/905:910NA
341/QA/922:923,1/QA/1393:1395NA
351/QA/925:927,1/QA/1390:1391NA
361/QA/933:935,1/QA/1380:1384NA
371/QA/953:954,1/QA/1226:1228NA
381/QA/993:998A,1/QA/1042:1045NA
391/QA/1048:1050,1/QA/1208:1209NA
401/QA/1051:1056,1/QA/1204:1207NA
411/QA/1057:1058,1/QA/1199:1203NA
421/QA/1060:1061,1/QA/1195:1197NA
431/QA/1061:1063,1/QA/1193:1195NA
441/QA/1247:1253,1/QA/1284:1290NA
451/QA/1255:1258,1/QA/1277:1282NA
461/QA/1259:1262,1/QA/1273:1276NA
471/QA/1303:1308,1/QA/1329:1334NA
481/QA/1399:1401,1/QA/1501:1504NA
491/QA/1401:1404,1/QA/1497:1501NA
501/QA/1405:1407,1/QA/1494:1496NA
511/QA/1407:1409,1/QA/1491:1494NA
521/QA/1412:1414,1/QA/1486:1488NA
531/QA/1416:1419,1/QA/1481:1484NA
541/QA/1431:1435,1/QA/1466:1469NA
551/QA/1435:1437,1/QA/1464:1466NA
561/QA/1440:1447,1/QA/1459:1461NA
571/RA/24:30,1/RA/510:516NA
581/RA/36:37,1/RA/442:444NA
591/RA/43:45,1/RA/433:436NA
601/RA/57:59,1/RA/68:70NA
611/RA/81:85,1/RA/97:105NA
621/RA/183:184,1/RA/212:214NA
631/RA/188:194,1/RA/201:208NA
641/RA/239:245,1/RA/253:258NA
651/RA/270J:270K,1/RA/270N:270PNA
661/RA/271:272,1/RA/365:366NA
671/RA/273:273B,1/RA/363D:364NA
681/RA/280:284,1/RA/357:360NA
691/RA/288:290,1/RA/350:353NA
701/RA/293:295,1/RA/343:347NA
711/RA/481:484,1/RA/496:509NA
721/RA/564:566,1/RA/575:577NA
731/RA/606:609A,1/RA/618A:622NA
741/RA/672:674,1/RA/806:808NA
751/RA/674:678,1/RA/799:806NA
761/RA/697:698,1/RA/763:765NA
771/RA/702:703,1/RA/728:730NA
781/RA/703:707,1/RA/724:728NA
791/RA/738:741,1/RA/756:758NA
801/RA/775:777,1/RA/787:791NA
811/RA/837:838,1/RA/940:942NA
821/RA/844:846,1/RA/931:934NA
831/RA/846:850,1/RA/928:931NA
841/RA/857:862,1/RA/915:920NA
851/RA/862:863,1/RA/913:915NA
861/RA/864:868,1/RA/909:912NA
871/RA/870:872,1/RA/905:907NA
881/RA/875:879,1/RA/898:902NA
891/RA/952:954,1/RA/963:965NA
901/RA/994:996,1/RA/1159:1160NA
911/RA/998:1002,1/RA/1153:1157NA
921/RA/1004:1011,1/RA/1150:1151NA
931/RA/1011:1013,1/RA/1149:1150NA
941/RA/1018:1024,1/RA/1140:1144NA
951/RA/1024:1030,1/RA/1124:1140NA
961/RA/1031:1034,1/RA/1121:1123NA
971/RA/1196:1198,1/RA/1247:1250NA
981/RA/1202:1206,1/RA/1240:1243NA
991/RA/1208:1215,1/RA/1234:1238NA
1001/RA/1219:1221,1/RA/1229A:1230NA
1011/RA/1262:1269,1/RA/2011:2017NA
1021/RA/1310:1313,1/RA/1603:1604NA
1031/RA/1319:1323,1/RA/1331:1333NA
1041/RA/1351:1355,1/RA/1376:1380NA
1051/RA/1357:1361,1/RA/1370:1374NA
1061/RA/1415:1416,1/RA/1582:1587NA
1071/RA/1417:1421,1/RA/1577:1581NA
1081/RA/1433:1435,1/RA/1557:1560NA
1091/RA/1437:1440,1/RA/1551:1555NA
1101/RA/1450:1451,1/RA/1459:1461NA
1111/RA/1469:1473,1/RA/1520:1523NA
1121/RA/1482:1483,1/RA/1506:1512NA
1131/RA/1526:1530,1/RA/1541:1546NA
1141/RA/1651:1656,1/RA/2004:2006NA
1151/RA/1663:1665,1/RA/1995:1997NA
1161/RA/1666:1669,1/RA/1993:1994NA
1171/RA/1669:1674,1/RA/1990:1993NA
1181/RA/1686:1691,1/RA/1696:1702NA
1191/RA/1770:1771,1/RA/1980:1982NA
1201/RA/1798:1804,1/RA/1813:1821NA
1211/RA/1837:1840,1/RA/1902:1903NA
1221/RA/1841:1842,1/RA/1898:1901NA
1231/RA/1846:1849,1/RA/1893:1894NA
1241/RA/1851:1855,1/RA/1887:1891NA
1251/RA/1856:1860,1/RA/1882:1886NA
1261/RA/1933:1934,1/RA/1964:1967NA
1271/RA/1934:1945,1/RA/1961:1964NA
1281/RA/2050:2052,1/RA/2617:2618NA
1291/RA/2054:2057,1/RA/2611:2615NA
1301/RA/2067:2069,1/RA/2442:2443NA
1311/RA/2070:2071,1/RA/2438:2441NA
1321/RA/2081:2083,1/RA/2236:2239NA
1331/RA/2085:2087,1/RA/2232:2234NA
1341/RA/2297:2299,1/RA/2317:2321NA
1351/RA/2350:2353,1/RA/2364:2367NA
1361/RA/2401:2403,1/RA/2414:2415NA
1371/RA/2453:2454,1/RA/2498:2500NA
1381/RA/2454:2455,1/RA/2496:2498NA
1391/RA/2457:2459,1/RA/2493:2494NA
1401/RA/2459:2461,1/RA/2489:2493NA
1411/RA/2466:2470,1/RA/2480:2484NA
1421/RA/2507:2508,1/RA/2580:2582NA
1431/RA/2510:2512,1/RA/2574:2578NA
1441/RA/2512:2513,1/RA/2571:2574NA
1451/RA/2522:2523,1/RA/2540:2543NA
1461/RA/2591:2592,1/RA/2601:2603NA
1471/RA/2636:2640,1/RA/2774:2782NA
1481/RA/2652:2658,1/RA/2663:2668NA
1491/RA/2680:2684,1/RA/2725:2727NA
1501/RA/2687:2691,1/RA/2718:2722NA
1511/RA/2695:2696,1/RA/2711:2714NA
1521/RA/2737:2742,1/RA/2762:2767NA
1531/RA/2838:2839,1/RA/2878:2880NA
1541/RA/2843:2846,1/RA/2870:2874NA
1551/RA/2847:2852,1/RA/2865:2869NA
1561/RB/17:18,1/RB/65:67NA
1571/RB/23:28,1/RB/56:60NA
1581/RB/30:32,1/RB/50:54NA
1591/RB/34:38,1/RB/44:48NA
1601/RB/71:79,1/RB/97:105NA
1611/XA/30:32,1/XA/552:553NA
1621/XA/44:45,1/XA/396:398NA
1631/XA/47:52,1/XA/359:361NA
1641/XA/54:56,1/XA/356:357NA
1651/XA/63:66,1/XA/103:104NA
1661/XA/67:69,1/XA/99:102NA
1671/XA/129:131,1/XA/231:232NA
1681/XA/132:136,1/XA/227:230NA
1691/XA/148:153,1/XA/168:174NA
1701/XA/185:186B,1/XA/191E:192NA
1711/XA/242:247,1/XA/277:284NA
1721/XA/249:252,1/XA/274:275NA
1731/XA/292:293,1/XA/304:308NA
1741/XA/371:375,1/XA/389:390NA
1751/XA/375:376,1/XA/387:389NA
1761/XA/409:416,1/XA/427:433NA
1771/XA/446:450,1/XA/483:488NA
1781/XA/450:455,1/XA/477:483NA
1791/XA/504:511,1/XA/540:541NA
1801/XA/515:521,1/XA/528:536NA
1811/XA/569:575,1/XA/880:881NA
1821/XA/580:584,1/XA/757:761NA
1831/XA/594:596,1/XA/644:645NA
1841/XA/597:598,1/XA/640:643NA
1851/XA/605:612,1/XA/628:633NA
1861/XA/654:655,1/XA/751:754NA
1871/XA/657:658,1/XA/747:749NA
1881/XA/662:666,1/XA/740:743NA
1891/XA/673:678,1/XA/712:717NA
1901/XA/683:688,1/XA/699:707NA
1911/XA/774:778,1/XA/804:805NA
1921/XA/779:783,1/XA/799:803NA
1931/XA/887:894,1/XA/905:910NA
1941/XA/922:923,1/XA/1393:1395NA
1951/XA/925:927,1/XA/1390:1391NA
1961/XA/933:935,1/XA/1380:1384NA
1971/XA/953:954,1/XA/1226:1228NA
1981/XA/993:997,1/XA/1044:1045NA
1991/XA/1048:1050,1/XA/1208:1209NA
2001/XA/1052:1056,1/XA/1204:1206NA
2011/XA/1057:1058,1/XA/1199:1203NA
2021/XA/1060:1061,1/XA/1195:1197NA
2031/XA/1061:1063,1/XA/1193:1195NA
2041/XA/1124:1127,1/XA/1145:1149NA
2051/XA/1128:1132,1/XA/1142:1144NA
2061/XA/1158:1161,1/XA/1175:1181NA
2071/XA/1247:1253,1/XA/1284:1290NA
2081/XA/1255:1258,1/XA/1277:1282NA
2091/XA/1259:1260,1/XA/1274:1276NA
2101/XA/1260:1262,1/XA/1273:1274NA
2111/XA/1303:1308,1/XA/1329:1334NA
2121/XA/1399:1401,1/XA/1501:1504NA
2131/XA/1401:1404,1/XA/1497:1501NA
2141/XA/1405:1407,1/XA/1494:1496NA
2151/XA/1407:1409,1/XA/1491:1494NA
2161/XA/1412:1414,1/XA/1486:1488NA
2171/XA/1416:1419,1/XA/1481:1484NA
2181/XA/1431:1435,1/XA/1466:1469NA
2191/XA/1435:1437,1/XA/1464:1466NA
2201/XA/1440:1447,1/XA/1459:1461NA
2211/YA/24:30,1/YA/510:516NA
2221/YA/36:37,1/YA/442:444NA
2231/YA/43:45,1/YA/433:436NA
2241/YA/81:85,1/YA/97:105NA
2251/YA/183:184,1/YA/212:214NA
2261/YA/188:194,1/YA/201:208NA
2271/YA/239:245,1/YA/253:258NA
2281/YA/270I:270K,1/YA/270N:270QNA
2291/YA/271:272,1/YA/365:366NA
2301/YA/273:273A,1/YA/363E:364NA
2311/YA/273F:279,1/YA/361:363NA
2321/YA/280:284,1/YA/357:360NA
2331/YA/288:290,1/YA/350:353NA
2341/YA/293:295,1/YA/343:347NA
2351/YA/481:484,1/YA/496:509NA
2361/YA/564:566,1/YA/575:577NA
2371/YA/606:609A,1/YA/618A:622NA
2381/YA/672:674,1/YA/806:808NA
2391/YA/674:678,1/YA/799:806NA
2401/YA/697:698,1/YA/763:765NA
2411/YA/702:703,1/YA/728:730NA
2421/YA/703:707,1/YA/724:728NA
2431/YA/738:741,1/YA/756:758NA
2441/YA/775:777,1/YA/787:791NA
2451/YA/837:838,1/YA/940:942NA
2461/YA/844:846,1/YA/931:934NA
2471/YA/846:850,1/YA/928:931NA
2481/YA/858:862,1/YA/915:919NA
2491/YA/862:863,1/YA/913:915NA
2501/YA/864:868,1/YA/909:912NA
2511/YA/870:872,1/YA/905:907NA
2521/YA/875:879,1/YA/898:902NA
2531/YA/880:881,1/YA/895:897NA
2541/YA/952:954,1/YA/963:965NA
2551/YA/994:996,1/YA/1159:1160NA
2561/YA/998:1002,1/YA/1153:1157NA
2571/YA/1004:1011,1/YA/1150:1151NA
2581/YA/1011:1013,1/YA/1149:1150NA
2591/YA/1018:1024,1/YA/1140:1144NA
2601/YA/1024:1030,1/YA/1124:1140NA
2611/YA/1031:1034,1/YA/1121:1123NA
2621/YA/1043:1052,1/YA/1107:1112NA
2631/YA/1196:1198,1/YA/1247:1250NA
2641/YA/1202:1206,1/YA/1240:1243NA
2651/YA/1208:1215,1/YA/1234:1238NA
2661/YA/1219:1221,1/YA/1229A:1230NA
2671/YA/1262:1269,1/YA/2011:2017NA
2681/YA/1310:1313,1/YA/1603:1604NA
2691/YA/1319:1323,1/YA/1331:1333NA
2701/YA/1351:1355,1/YA/1376:1380NA
2711/YA/1357:1361,1/YA/1370:1374NA
2721/YA/1415:1416,1/YA/1582:1587NA
2731/YA/1417:1421,1/YA/1577:1581NA
2741/YA/1433:1435,1/YA/1557:1560NA
2751/YA/1437:1440,1/YA/1551:1555NA
2761/YA/1448:1449A,1/YA/1462:1463NA
2771/YA/1450:1451,1/YA/1459:1461NA
2781/YA/1469:1473,1/YA/1520:1523NA
2791/YA/1482:1483,1/YA/1506:1512NA
2801/YA/1489:1491,1/YA/1499:1500NA
2811/YA/1526:1530,1/YA/1541:1546NA
2821/YA/1651:1656,1/YA/2004:2006NA
2831/YA/1686:1691,1/YA/1696:1702NA
2841/YA/1770:1771,1/YA/1980:1982NA
2851/YA/1798:1804,1/YA/1813:1821NA
2861/YA/1837:1840,1/YA/1902:1903NA
2871/YA/1841:1842,1/YA/1898:1901NA
2881/YA/1846:1849,1/YA/1893:1894NA
2891/YA/1851:1855,1/YA/1887:1891NA
2901/YA/1856:1860,1/YA/1882:1886NA
2911/YA/1933:1934,1/YA/1964:1967NA
2921/YA/1934:1945,1/YA/1961:1964NA
2931/YA/2050:2052,1/YA/2617:2618NA
2941/YA/2054:2057,1/YA/2611:2615NA
2951/YA/2067:2069,1/YA/2442:2443NA
2961/YA/2070:2071,1/YA/2438:2441NA
2971/YA/2081:2083,1/YA/2236:2239NA
2981/YA/2085:2087,1/YA/2232:2234NA
2991/YA/2097:2099,1/YA/2190:2192NA
3001/YA/2297:2299,1/YA/2317:2321NA
3011/YA/2350:2353,1/YA/2364:2367NA
3021/YA/2401:2403,1/YA/2414:2415NA
3031/YA/2453:2454,1/YA/2498:2500NA
3041/YA/2454:2455,1/YA/2496:2498NA
3051/YA/2457:2459,1/YA/2493:2494NA
3061/YA/2459:2461,1/YA/2489:2493NA
3071/YA/2466:2470,1/YA/2480:2484NA
3081/YA/2507:2508,1/YA/2580:2582NA
3091/YA/2510:2512,1/YA/2574:2578NA
3101/YA/2512:2513,1/YA/2571:2574NA
3111/YA/2522:2523,1/YA/2540:2543NA
3121/YA/2591:2592,1/YA/2601:2603NA
3131/YA/2636:2640,1/YA/2774:2782NA
3141/YA/2652:2658,1/YA/2663:2668NA
3151/YA/2680:2684,1/YA/2725:2727NA
3161/YA/2687:2691,1/YA/2718:2722NA
3171/YA/2695:2696,1/YA/2711:2714NA
3181/YA/2737:2742,1/YA/2762:2767NA
3191/YA/2843:2846,1/YA/2870:2874NA
3201/YA/2847:2852,1/YA/2865:2869NA
3211/YB/17:18,1/YB/65:67NA
3221/YB/23:28,1/YB/56:60NA
3231/YB/30:32,1/YB/50:54NA
3241/YB/34:38,1/YB/44:48NA
3251/YB/71:79,1/YB/97:105NA
3261/YB/80:82,1/YB/94:96NA

Problematic loops

#loop idProblemSequence
163, 64, 65, 66, 103, 104
275, 76, 77, 92, 93, 95
3CUA,UAG
4AGG,CCU
51124, 1125, 1126, 1127, 1145, 1146, 1147, 1148, 1149
61129, 1130, 1131, 1132, 1142, 1143
7CUC,GAG
8273, 274, 275, 276, 277, 278, 279, 361, 362, 363
9880, 881, 895, 896, 897
101043, 1044, 1045, 1046, 1047, 1048, 1049, 1050, 1051, 1108, 1109, 1110, 1111, 1112
111059, 1060, 1061, 1062, 1076, 1077, 1078, 1079
121087, 1088, 1089, 1090, 1091, 1100, 1101, 1102
131448, 1449, 1449, 1462, 1463
141489, 1490, 1491, 1499, 1500
152099, 2100, 2101, 2188, 2189, 2190
162108, 2109, 2110, 2111, 2112, 2113, 2114, 2115, 2116, 2117, 2118, 2119, 2120, 2178, 2179, 2180, 2181
172123, 2124, 2125, 2126, 2127, 2161, 2162, 2163, 2164, 2165, 2166, 2167, 2168, 2169, 2170, 2171, 2172, 2173, 2174, 2175
18GCC,GGC
192129, 2130, 2131, 2132, 2133, 2134, 2135, 2136, 2155, 2156, 2157, 2158, 2159
20367, 368, 369, 392, 393
21UGC,GCA
22CCC,GGG
23UAG,CUA
24CUC,GAG
251059, 1060, 1061, 1062, 1076, 1077, 1078, 1079
261087, 1088, 1089, 1090, 1091, 1100, 1101, 1102
27GGG,CCC
28GCG,CGC
292108, 2109, 2110, 2111, 2112, 2113, 2114, 2115, 2116, 2117, 2118, 2119, 2120, 2178, 2179, 2180, 2181
302124, 2125, 2126, 2127, 2161, 2162, 2163, 2164, 2165, 2166, 2167, 2168, 2169, 2170, 2171, 2172, 2173, 2174
31GCC,GGC
322129, 2130, 2131, 2132, 2133, 2134, 2135, 2136, 2155, 2156, 2157, 2158, 2159
332838, 2839, 2878, 2879, 2880

Valid loops

#loop idlocationmotif
11/QA/12:22NA
21/QA/158:163NA
31/QA/186F:191ANA
41/QA/201:216NA
51/QA/259:267NA
61/QA/296:301NA
71/QA/320:333NA
81/QA/342:347NA
91/QA/419:424NA
101/QA/458:474NA
111/QA/522:527NA
121/QA/617:623NA
131/QA/689:698NA
141/QA/726:731NA
151/QA/786:796NA
161/QA/838:848NA
171/QA/862:867NA
181/QA/897:902NA
191/QA/963:972NA
201/QA/1012:1017NA
211/QA/1076:1081NA
221/QA/1089:1096NA
231/QA/1165:1171NA
241/QA/1265:1270NA
251/QA/1314:1323NA
261/QA/1356:1366NA
271/QA/1449:1454NA
281/QA/1515:1520NA
291/QV/13:22NA
301/QV/31:39NA
311/QV/53:61NA
321/RA/59:68NA
331/RA/87:95NA
341/RA/123:128NA
351/RA/137A:141ANA
361/RA/194:201NA
371/RA/225:230NA
381/RA/246:252NA
391/RA/305:312NA
401/RA/319:323NA
411/RA/327:335NA
421/RA/382:392NA
431/RA/410:417NA
441/RA/462:467NA
451/RA/487:493NA
461/RA/544:549NA
471/RA/566:575NA
481/RA/611:617NA
491/RA/629:634NA
501/RA/641:647NA
511/RA/712:719NA
521/RA/744:753NA
531/RA/779:785NA
541/RA/826:831NA
551/RA/883:893NA
561/RA/955:962NA
571/RA/978:985NA
581/RA/1171:1178NA
591/RA/1223:1228NA
601/RA/1281:1289NA
611/RA/1324:1330NA
621/RA/1363:1368NA
631/RA/1389:1398NA
641/RA/1451:1459NA
651/RA/1492:1498NA
661/RA/1533:1538NA
671/RA/1565:1568NA
681/RA/1612:1619NA
691/RA/1630A:1635NA
701/RA/1691:1696NA
711/RA/1727:1733NA
721/RA/1752:1756NA
731/RA/1777:1787NA
741/RA/1806:1811NA
751/RA/1864:1878NA
761/RA/1910:1920NA
771/RA/1949:1957NA
781/RA/2027:2036NA
791/RA/2209:2215NA
801/RA/2248:2256NA
811/RA/2264:2276NA
821/RA/2303:2313NA
831/RA/2324:2331NA
841/RA/2355:2362NA
851/RA/2374:2379NA
861/RA/2404:2413NA
871/RA/2471:2479NA
881/RA/2528:2535NA
891/RA/2551:2557NA
901/RA/2594:2599NA
911/RA/2701:2706NA
921/RA/2745:2759NA
931/RA/2819:2827NA
941/RA/2856:2861NA
951/RB/38:44NA
961/RB/86:90NA
971/XA/12:22NA
981/XA/158:163NA
991/XA/186F:191ANA
1001/XA/201:216NA
1011/XA/259:267NA
1021/XA/296:301NA
1031/XA/320:333NA
1041/XA/342:347NA
1051/XA/379:384NA
1061/XA/419:424NA
1071/XA/458:474NA
1081/XA/522:527NA
1091/XA/617:623NA
1101/XA/689:698NA
1111/XA/726:731NA
1121/XA/786:796NA
1131/XA/838:848NA
1141/XA/862:867NA
1151/XA/897:902NA
1161/XA/963:972NA
1171/XA/1012:1017NA
1181/XA/1076:1081NA
1191/XA/1089:1096NA
1201/XA/1134:1140NA
1211/XA/1165:1171NA
1221/XA/1265:1270NA
1231/XA/1314:1323NA
1241/XA/1356:1366NA
1251/XA/1449:1454NA
1261/XA/1515:1520NA
1271/XV/13:22NA
1281/XV/31:39NA
1291/XV/53:61NA
1301/YA/59:68NA
1311/YA/87:95NA
1321/YA/123:128NA
1331/YA/137A:141ANA
1341/YA/194:201NA
1351/YA/225:230NA
1361/YA/246:252NA
1371/YA/305:312NA
1381/YA/327:335NA
1391/YA/382:392NA
1401/YA/410:417NA
1411/YA/462:467NA
1421/YA/487:493NA
1431/YA/544:549NA
1441/YA/566:575NA
1451/YA/611:617NA
1461/YA/629:634NA
1471/YA/641:647NA
1481/YA/712:719NA
1491/YA/744:753NA
1501/YA/779:785NA
1511/YA/826:831NA
1521/YA/884:892NA
1531/YA/955:962NA
1541/YA/978:985NA
1551/YA/1171:1178NA
1561/YA/1223:1228NA
1571/YA/1281:1289NA
1581/YA/1324:1330NA
1591/YA/1363:1368NA
1601/YA/1389:1398NA
1611/YA/1451:1459NA
1621/YA/1492:1498NA
1631/YA/1533:1538NA
1641/YA/1565:1568NA
1651/YA/1612:1619NA
1661/YA/1630A:1635NA
1671/YA/1691:1696NA
1681/YA/1727:1733NA
1691/YA/1752:1756NA
1701/YA/1777:1787NA
1711/YA/1806:1811NA
1721/YA/1864:1878NA
1731/YA/1910:1920NA
1741/YA/1949:1957NA
1751/YA/1992:1996NA
1761/YA/2027:2036NA
1771/YA/2209:2215NA
1781/YA/2248:2256NA
1791/YA/2264:2276NA
1801/YA/2303:2313NA
1811/YA/2324:2331NA
1821/YA/2355:2362NA
1831/YA/2374:2379NA
1841/YA/2404:2413NA
1851/YA/2471:2479NA
1861/YA/2528:2535NA
1871/YA/2551:2557NA
1881/YA/2594:2599NA
1891/YA/2658:2663NA
1901/YA/2701:2706NA
1911/YA/2745:2759NA
1921/YA/2819:2827NA
1931/YA/2856:2861NA
1941/YB/38:44NA
1951/YB/86:90NA

Problematic loops

#loop idProblemSequence
179, 80, 88, 89, 90
2379, 380, 381, 382, 383, 384
31028, 1028, 1028, 1029, 1030, 1031, 1032, 1032, 1032, 1033
41134, 1135, 1136, 1137, 1138, 1139, 1140
5270, 270, 270, 270
6654, 654, 654, 654
71064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074
81092, 1093, 1094, 1095, 1096, 1097, 1098, 1099
92143, 2144, 2145, 2146, 2147, 2148
102658, 2659, 2660, 2661, 2662, 2663
112794, 2795, 2797, 2798, 2799, 2801, 2802
1278, 79, 90, 91
131028, 1029, 1030, 1031, 1032, 1032
14270, 270, 270, 270
15319, 320, 321, 322, 323
161064, 1065, 1066, 1067, 1068, 1069, 1070, 1071, 1072, 1073, 1074
171092, 1093, 1094, 1095, 1096, 1097, 1098, 1099
182143, 2144, 2145, 2146, 2147, 2148
192794, 2795, 2797, 2798, 2799, 2801, 2802

Valid loops

#loop idlocationmotif
11/QA/826:829,1/QA/857:861,1/QA/868:874NA
21/QA/936:939,1/QA/1344:1350,1/QA/1372:1379NA
31/QA/943:946,1/QA/1235:1237,1/QA/1337:1340NA
41/QA/955:962,1/QA/973:984,1/QA/1221:1225NA
51/QA/990:993,1/QA/1045:1047,1/QA/1210:1215NA
61/QA/1063:1068,1/QA/1107:1113,1/QA/1187:1193NA
71/QA/1116:1118,1/QA/1155:1161,1/QA/1175:1184NA
81/QA/1237:1241,1/QA/1296:1303,1/QA/1334:1337NA
91/RA/683:689,1/RA/773:775,1/RA/791:794NA
101/RA/698:700,1/RA/732:736,1/RA/760:763NA
111/RA/1298:1303,1/RA/1625:1627,1/RA/1639:1642NA
121/RA/1306:1309,1/RA/1605:1611,1/RA/1620:1622NA
131/RA/2091:2093,1/RA/2196:2205,1/RA/2219:2228NA
141/RA/2295:2297,1/RA/2321:2323,1/RA/2332:2337NA
151/RA/2517:2520,1/RA/2545:2547,1/RA/2561:2567NA
161/RA/2789:2791,1/RA/2805:2811,1/RA/2889:2894NA
171/XA/826:829,1/XA/857:861,1/XA/868:874NA
181/XA/936:939,1/XA/1344:1350,1/XA/1372:1379NA
191/XA/943:946,1/XA/1235:1237,1/XA/1337:1340NA
201/XA/955:962,1/XA/973:984,1/XA/1221:1225NA
211/XA/990:993,1/XA/1045:1047,1/XA/1210:1215NA
221/XA/1063:1068,1/XA/1107:1113,1/XA/1187:1193NA
231/XA/1116:1118,1/XA/1155:1158,1/XA/1181:1184NA
241/XA/1237:1241,1/XA/1296:1303,1/XA/1334:1337NA
251/YA/683:689,1/YA/773:775,1/YA/791:794NA
261/YA/698:700,1/YA/732:736,1/YA/760:763NA
271/YA/1298:1303,1/YA/1625:1627,1/YA/1639:1642NA
281/YA/1306:1309,1/YA/1605:1611,1/YA/1620:1622NA
291/YA/2091:2093,1/YA/2196:2205,1/YA/2219:2228NA
301/YA/2295:2297,1/YA/2321:2323,1/YA/2332:2337NA
311/YA/2517:2520,1/YA/2545:2547,1/YA/2561:2567NA
321/YA/2789:2792,1/YA/2804:2811,1/YA/2889:2894NA
331/YB/11:16,1/YB/68:70,1/YB/106:109NA

Problematic loops

#loop idProblemSequence
11003, 1004, 1005, 1006, 1007, 1022, 1023, 1024, 1025, 1026, 1027, 1034, 1035, 1036, 1037
21055, 1056, 1057, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1102, 1103, 1104
31000, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1022, 1023, 1024, 1025, 1026, 1027, 1034, 1035, 1036, 1037, 1038, 1039, 1040
41055, 1056, 1057, 1081, 1082, 1083, 1084, 1085, 1086, 1087, 1102, 1103, 1104

Coloring options: