5JUS Summary
- Structure Title
- 5JUS Summary
- Authors
- Release Date
- 2016-10-05
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
- Chains
-
- 5 RNA chains from Saccharomyces cerevisiae, Taura syndrome virus
- 78 other chains
- Compounds
- 18S ribosomal RNA, uL14 (yeast L23), uS3 (yeast S3), uS14 (yeast S29), 25S ribosomal RNA, eL24 (yeast L24), eS4 (yeast S4), eS30 (yeast S30), 5.8S ribosomal RNA, uL23 (yeast L25), uS7 (yeast S5), eS31 (yeast S31), 5S ribosomal RNA, uL24 (yeast L26), eS6 (yeast S6), yeast eEF2, uL1 (yeast L1), eL27 (yeast L27), eS7 (yeast S7), IRES, uL2 (yeast L2), uL15 (yeast L28), eS8 (yeast S8), uL3 (yeast L3), eL29 (yeast L29), uS4 (yeast S9), uL4 (yeast L4), eL30 (yeast L30), eS10 (yeast S10), uL18 (yeast L5), eL31 (yeast L31), uS17 (yeast S11), eL6 (yeast L6), eL32 (yeast L32), eS12 (yeast S12), uL30 (yeast L7), eL33 (yeast L33), uS15 (yeast S13), eL8 (yeast L8), eL34 (yeast L34), uS11 (yeast S14), uL6 (yeast L9), uL29 (yeast L35), uS19 (yeast S15), uL16 (yeast L10), eL36 (yeast L36), uS9 (yeast S16), uL5 (yeast L11), eL37 (yeast L37), eS17 (yeast S17), uL11 (yeast L12), eL38 (yeast L38), uS13 (yeast S18), eL13 (yeast L13), eL39 (yeast L39), eS19 (yeast S19), eL14 (yeast L14), eL40 (yeast L40), uS10 (yeast S20), eL15 (yeast L15), eL41 (yeast L41), eS21 (yeast S21), uL13 (yeast L16), eL42 (yeast L42), uS8 (yeast S22), uL22 (yeast L17), eL43 (yeast L43), uS12 (yeast S23), eL18 (yeast L18), uL10 (yeast P0), eS24 (yeast S24), eL19 (yeast L19), RACK1 (yeast Asc1), eS25 (yeast S25), eL20 (yeast L20), uS2 (yeast S0), eS26 (yeast S26), eL21 (yeast L21), eS1 (yeast S1), eS27 (yeast S27), eL22 (yeast L22), uS5 (yeast S2), eS28 (yeast S28)
Pairwise Interactions
Interactions annotated by FR3D:- 1,748 base-pairs
- 4,949 base-stacking
- 1,969 base-phosphate
- 249 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5JUS contains:- 226 internal loops from 0 motif groups
- 119 hairpin loops from 0 motif groups
- 32 three-way junctions
3D Redundancy
5JUS has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_18586.59 (1)
- NR_20.0_90506.63 (1)
- NR_20.0_04576.1 (1)
- NR_20.0_03510.54 (1)
- NR_all_18586.59 (1)
- NR_all_90506.63 (1)
- NR_all_04576.1 (1)
- NR_all_03510.54 (1)
Similar structures
4V88 5MC6 8BQD 7NRC 8C83 8BQX 4U56 6LQP 4U56 8EVR 6SV4 6KE6 6T83 6EML 7WTR 6GQB 6Y7C 5JUU 8CMJ 5JUT 6RBE 5JUO 6T83 4U53 6RBD 4U4Y 6S47 4U3N 4U51 4U50 6T7I 8CKU 4U4N 5M1J 4U55 4U51 8C00 4U53 5JUP 4U50 6FAI 6Z6J 6Z6K 6TNU 8EVS 4U55 7ZPQ 6T7T 6XIQ 7D63 3J6Y 6LQV 6LQT 7AJT 6ZCE 6I7O 5WYK 7D5S 6I7O 5WLC 3J6X 3J77 4V6I 5WYJ 6LQR 6ZQE 5TZS 7D5T 4V8Z 6ZQF 6ZU9 3J78 7ZRS 6ZQC 7WTP 6LQU 7WTO 4U4O 7WTL 7WTN 4U4O 6ZQG 7NRD 7ZUW 4V8Y 7WTM 6ZQB 7SUK 6LQQ 5LL6 6LQS 7AJU 6GQ1 6ZQD 7D4I 7WTQ 6GQV 8CGN 5TGA 5DAT 5DC3 5DGF 5DGV 5DGE 5TGA 5DAT 4V7R 4V7R 5DGV 5DGE 7ZUX 8EWC 7PZY 7ZW0 8EVP 8CEH 8CDR 8CCS 5DC3 5DGF 5TGM 5TGM 5I4L 5LYB 5NDW 5MEI 5I4L 5OBM 6HHQ 7OSA 5TBW 4V88 5OBM 7OSM 5NDG 5NDG 5ON6 5NDV 5NDV 5LYB 6HHQ 5NDW 5ON6 5MEI 5TBW 8EUB 4U4Z 4U6F 4U4U 4U52 7RR5 4U3M 4U52 4U4U 4U4Q 4U3M 8C01 4U4Q 4U4N 4U3N 4U4Y 6SV4 6SV4 8CAS 7B7D 6XIR 4U4Z 4U6F 6Q8Y 7MPI 7N8B 8EWB 6WOO 7Q0P 8CG8 7Q0R 7Q0F 8EVQ 7MPJ 6T4Q 8CIV 4U4R 6TB3 4U3U 8EVT 8CAH 6ZVI 7A1G 8CDL 4U3U 4U4R 8CF5 6SNT 7Q08Structures from NR_all_03510.54