6CAQ Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/12:22 | NA | NA | ||
| 1/A/80:89 | NA | NA | ||
| 1/A/158:163 | NA | NA | ||
| 1/A/190B:190G | NA | NA | ||
| 1/A/201:216 | NA | NA | ||
| 1/A/259:267 | NA | NA | ||
| 1/A/296:301 | NA | NA | ||
| 1/A/320:333 | NA | NA | ||
| 1/A/342:347 | NA | NA | ||
| 1/A/379:384 | NA | NA | ||
| 1/A/419:424 | NA | NA | ||
| 1/A/458:474 | NA | NA | ||
| 1/A/521:528 | NA | NA | ||
| 1/A/617:623 | NA | NA | ||
| 1/A/689:698 | NA | NA | ||
| 1/A/726:731 | NA | NA | ||
| 1/A/786:796 | NA | NA | ||
| 1/A/838:848 | NA | NA | ||
| 1/A/862:867 | NA | NA | ||
| 1/A/897:902 | NA | NA | ||
| 1/A/963:972 | NA | NA | ||
| 1/A/1012:1017 | NA | NA | ||
| 1/A/1076:1081 | NA | NA | ||
| 1/A/1089:1096 | NA | NA | ||
| 1/A/1134:1140 | NA | NA | ||
| 1/A/1265:1270 | NA | NA | ||
| 1/A/1314:1323 | NA | NA | ||
| 1/A/1356:1366 | NA | NA | ||
| 1/A/1449:1454 | NA | NA | ||
| 1/A/1515:1520 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6CAQ_023 | NA | ||
| HL_6CAQ_027 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/30:32, 1/A/552:553 | NA | NA | ||
| 1/A/44:45, 1/A/396:398 | NA | NA | ||
| 1/A/47:52, 1/A/359:361 | NA | NA | ||
| 1/A/54:56, 1/A/356:357 | NA | NA | ||
| 1/A/63:66, 1/A/103:104 | NA | NA | ||
| 1/A/67:69, 1/A/99:102 | NA | NA | ||
| 1/A/129:131, 1/A/231:232 | NA | NA | ||
| 1/A/132:136, 1/A/227:230 | NA | NA | ||
| 1/A/148:153, 1/A/168:174 | NA | NA | ||
| 1/A/186:188, 1/A/190K:191 | NA | NA | ||
| 1/A/242:247, 1/A/277:284 | NA | NA | ||
| 1/A/249:252, 1/A/274:275 | NA | NA | ||
| 1/A/292:293, 1/A/304:308 | NA | NA | ||
| 1/A/367:369, 1/A/392:393 | NA | NA | ||
| 1/A/371:375, 1/A/389:390 | NA | NA | ||
| 1/A/375:376, 1/A/387:389 | NA | NA | ||
| 1/A/409:416, 1/A/427:433 | NA | NA | ||
| 1/A/446:450, 1/A/483:488 | NA | NA | ||
| 1/A/450:455, 1/A/477:483 | NA | NA | ||
| 1/A/504:511, 1/A/540:541 | NA | NA | ||
| 1/A/515:521, 1/A/528:536 | NA | NA | ||
| 1/A/569:575, 1/A/880:881 | NA | NA | ||
| 1/A/580:584, 1/A/757:761 | NA | NA | ||
| 1/A/594:596, 1/A/644:645 | NA | NA | ||
| 1/A/597:598, 1/A/640:643 | NA | NA | ||
| 1/A/605:612, 1/A/628:633 | NA | NA | ||
| 1/A/654:655, 1/A/751:754 | NA | NA | ||
| 1/A/657:658, 1/A/747:749 | NA | NA | ||
| 1/A/662:666, 1/A/740:743 | NA | NA | ||
| 1/A/673:678, 1/A/712:717 | NA | NA | ||
| 1/A/683:688, 1/A/699:707 | NA | NA | ||
| 1/A/774:778, 1/A/804:805 | NA | NA | ||
| 1/A/779:783, 1/A/799:803 | NA | NA | ||
| 1/A/887:894, 1/A/905:910 | NA | NA | ||
| 1/A/922:923, 1/A/1393:1395 | NA | NA | ||
| 1/A/925:927, 1/A/1390:1391 | NA | NA | ||
| 1/A/933:935, 1/A/1380:1384 | NA | NA | ||
| 1/A/953:954, 1/A/1226:1228 | NA | NA | ||
| 1/A/993:997, 1/A/1044:1045 | NA | NA | ||
| 1/A/1048:1050, 1/A/1208:1209 | NA | NA | ||
| 1/A/1050:1052, 1/A/1206:1208 | NA | NA | ||
| 1/A/1052:1056, 1/A/1204:1206 | NA | NA | ||
| 1/A/1057:1058, 1/A/1199:1203 | NA | NA | ||
| 1/A/1060:1061, 1/A/1195:1197 | NA | NA | ||
| 1/A/1061:1063, 1/A/1193:1195 | NA | NA | ||
| 1/A/1124:1128, 1/A/1143:1149 | NA | NA | ||
| 1/A/1247:1253, 1/A/1284:1290 | NA | NA | ||
| 1/A/1255:1258, 1/A/1277:1282 | NA | NA | ||
| 1/A/1259:1260, 1/A/1274:1276 | NA | NA | ||
| 1/A/1260:1262, 1/A/1273:1274 | NA | NA | ||
| 1/A/1303:1308, 1/A/1329:1334 | NA | NA | ||
| 1/A/1399:1401, 1/A/1501:1504 | NA | NA | ||
| 1/A/1401:1405, 1/A/1496:1501 | NA | NA | ||
| 1/A/1405:1409, 1/A/1491:1496 | NA | NA | ||
| 1/A/1412:1414, 1/A/1486:1488 | NA | NA | ||
| 1/A/1416:1419, 1/A/1481:1484 | NA | NA | ||
| 1/A/1431:1435, 1/A/1466:1469 | NA | NA | ||
| 1/A/1435:1437, 1/A/1464:1466 | NA | NA | ||
| 1/A/1440:1447, 1/A/1459:1461 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6CAQ_040 | NA | ||
| IL_6CAQ_048 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/46:47, 1/A/361:367, 1/A/393:395 | NA | NA | ||
| 1/A/586:588, 1/A/651:654, 1/A/754:755 | NA | NA | ||
| 1/A/672:673, 1/A/717:725, 1/A/732:734 | NA | NA | ||
| 1/A/826:829, 1/A/857:861, 1/A/868:874 | NA | NA | ||
| 1/A/936:939, 1/A/1344:1350, 1/A/1372:1379 | NA | NA | ||
| 1/A/943:946, 1/A/1235:1237, 1/A/1337:1340 | NA | NA | ||
| 1/A/955:962, 1/A/973:984, 1/A/1221:1225 | NA | NA | ||
| 1/A/990:993, 1/A/1045:1047, 1/A/1210:1215 | NA | NA | ||
| 1/A/1063:1068, 1/A/1107:1113, 1/A/1187:1193 | NA | NA | ||
| 1/A/1073:1074, 1/A/1083:1087, 1/A/1098:1102 | NA | NA | ||
| 1/A/1116:1118, 1/A/1155:1161, 1/A/1175:1184 | NA | NA | ||
| 1/A/1237:1241, 1/A/1296:1303, 1/A/1334:1337 | NA | NA |
Problematic loops
No problematic loops
Coloring options: