6D90 Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
# | loop id | location | annotation | motif |
---|---|---|---|---|
1 | ➜ | 1/2/23:25,1/2/649:651 | NA | NA |
2 | ➜ | 1/2/34:36,1/2/519:521 | NA | NA |
3 | ➜ | 1/2/36:40,1/2/514:519 | NA | NA |
4 | ➜ | 1/2/41:47,1/2/479:481 | NA | NA |
5 | ➜ | 1/2/49:51,1/2/476:477 | NA | NA |
6 | ➜ | 1/2/57:62,1/2/86:88 | NA | NA |
7 | ➜ | 1/2/62:68,1/2/81:86 | NA | NA |
8 | ➜ | 1/2/108:110,1/2/351:353 | NA | NA |
9 | ➜ | 1/2/110:112,1/2/349:351 | NA | NA |
10 | ➜ | 1/2/112:121,1/2/343:349 | NA | NA |
11 | ➜ | 1/2/130:144,1/2/175:182 | NA | NA |
12 | ➜ | 1/2/145:152,1/2/166:174 | NA | NA |
13 | ➜ | 1/2/152:154,1/2/164:166 | NA | NA |
14 | ➜ | 1/2/188:192,1/2/207:211 | NA | NA |
15 | ➜ | 1/2/216:219,1/2/302:309 | NA | NA |
16 | ➜ | 1/2/223:288,1/2/295:298 | NA | NA |
17 | ➜ | 1/2/312:315,1/2/335:337 | NA | NA |
18 | ➜ | 1/2/317:319,1/2/332:333 | NA | NA |
19 | ➜ | 1/2/359:364,1/2/396:403 | NA | NA |
20 | ➜ | 1/2/366:371,1/2/393:394 | NA | NA |
21 | ➜ | 1/2/411:413,1/2/424:429 | NA | NA |
22 | ➜ | 1/2/437:439,1/2/454:456 | NA | NA |
23 | ➜ | 1/2/459:461,1/2/468:470 | NA | NA |
24 | ➜ | 1/2/487:489,1/2/511:512 | NA | NA |
25 | ➜ | 1/2/491:496,1/2/506:509 | NA | NA |
26 | ➜ | 1/2/529:530,1/2/554:556 | NA | NA |
27 | ➜ | 1/2/534:538,1/2/545:550 | NA | NA |
28 | ➜ | 1/2/563:565,1/2/585:592 | NA | NA |
29 | ➜ | 1/2/566:569,1/2/581:584 | NA | NA |
30 | ➜ | 1/2/598:608,1/2/635:638 | NA | NA |
31 | ➜ | 1/2/611:617,1/2/624:632 | NA | NA |
32 | ➜ | 1/2/663:665,1/2/1162:1164 | NA | NA |
33 | ➜ | 1/2/665:671,1/2/1161:1162 | NA | NA |
34 | ➜ | 1/2/673:675,1/2/1030:1032 | NA | NA |
35 | ➜ | 1/2/676:680,1/2/1025:1029 | NA | NA |
36 | ➜ | 1/2/692:695,1/2/731:734 | NA | NA |
37 | ➜ | 1/2/744:750,1/2/793:797 | NA | NA |
38 | ➜ | 1/2/752:754,1/2/790:791 | NA | NA |
39 | ➜ | 1/2/802:803,1/2/860:863 | NA | NA |
40 | ➜ | 1/2/804:807,1/2/856:859 | NA | NA |
41 | ➜ | 1/2/807:816,1/2/848:856 | NA | NA |
42 | ➜ | 1/2/876:879,1/2/907:910 | NA | NA |
43 | ➜ | 1/2/922:923,1/2/1019:1022 | NA | NA |
44 | ➜ | 1/2/924:927,1/2/1014:1018 | NA | NA |
45 | ➜ | 1/2/927:931,1/2/1010:1014 | NA | NA |
46 | ➜ | 1/2/931:935,1/2/1007:1010 | NA | NA |
47 | ➜ | 1/2/942:947,1/2/979:984 | NA | NA |
48 | ➜ | 1/2/952:956,1/2/967:974 | NA | NA |
49 | ➜ | 1/2/1042:1051,1/2/1067:1073 | NA | NA |
50 | ➜ | 1/2/1091:1093,1/2/1152:1158 | NA | NA |
51 | ➜ | 1/2/1098:1101,1/2/1131:1134 | NA | NA |
52 | ➜ | 1/2/1101:1103,1/2/1129:1131 | NA | NA |
53 | ➜ | 1/2/1108:1110,1/2/1123:1124 | NA | NA |
54 | ➜ | 1/2/1168:1175,1/2/1186:1191 | NA | NA |
55 | ➜ | 1/2/1203:1204,1/2/1694:1696 | NA | NA |
56 | ➜ | 1/2/1206:1208,1/2/1691:1692 | NA | NA |
57 | ➜ | 1/2/1214:1217,1/2/1681:1685 | NA | NA |
58 | ➜ | 1/2/1230:1232,1/2/1526:1528 | NA | NA |
59 | ➜ | 1/2/1235:1236,1/2/1521:1523 | NA | NA |
60 | ➜ | 1/2/1270:1272,1/2/1510:1512 | NA | NA |
61 | ➜ | 1/2/1280:1287,1/2/1314:1317 | NA | NA |
62 | ➜ | 1/2/1287:1290,1/2/1309:1314 | NA | NA |
63 | ➜ | 1/2/1291:1294,1/2/1305:1308 | NA | NA |
64 | ➜ | 1/2/1325:1327,1/2/1502:1503 | NA | NA |
65 | ➜ | 1/2/1328:1333,1/2/1498:1501 | NA | NA |
66 | ➜ | 1/2/1333:1335,1/2/1492:1498 | NA | NA |
67 | ➜ | 1/2/1337:1338,1/2/1488:1490 | NA | NA |
68 | ➜ | 1/2/1347:1349,1/2/1380:1382 | NA | NA |
69 | ➜ | 1/2/1363:1365,1/2/1374:1375 | NA | NA |
70 | ➜ | 1/2/1395:1399,1/2/1447:1450 | NA | NA |
71 | ➜ | 1/2/1402:1406,1/2/1440:1444 | NA | NA |
72 | ➜ | 1/2/1412:1413,1/2/1427:1429 | NA | NA |
73 | ➜ | 1/2/1536:1539,1/2/1594:1597 | NA | NA |
74 | ➜ | 1/2/1550:1558,1/2/1577:1582 | NA | NA |
75 | ➜ | 1/2/1560:1562,1/2/1573:1575 | NA | NA |
76 | ➜ | 1/2/1604:1610,1/2/1629:1635 | NA | NA |
77 | ➜ | 1/2/1700:1702,1/2/1833:1836 | NA | NA |
78 | ➜ | 1/2/1702:1705,1/2/1829:1833 | NA | NA |
79 | ➜ | 1/2/1705:1708,1/2/1826:1829 | NA | NA |
80 | ➜ | 1/2/1708:1711,1/2/1822:1826 | NA | NA |
81 | ➜ | 1/2/1714:1717,1/2/1816:1819 | NA | NA |
82 | ➜ | 1/2/1717:1720,1/2/1813:1816 | NA | NA |
83 | ➜ | 1/2/1720:1722,1/2/1812:1813 | NA | NA |
84 | ➜ | 1/2/1728:1731,1/2/1803:1806 | NA | NA |
85 | ➜ | 1/2/1733:1736,1/2/1798:1801 | NA | NA |
86 | ➜ | 1/2/1739:1741,1/2/1793:1795 | NA | NA |
87 | ➜ | 1/2/1742:1747,1/2/1787:1792 | NA | NA |
88 | ➜ | 1/2/1750:1753,1/2/1779:1784 | NA | NA |
89 | ➜ | 1/3/46:48,1/3/56:57 | NA | NA |
90 | ➜ | 1/4/6050:6053,1/4/6073:6076 | NA | NA |
91 | ➜ | 1/4/6127:6129,1/4/6157:6159 | NA | NA |
92 | ➜ | 1/4/6132:6139,1/4/6149:6154 | NA | NA |
93 | ➜ | 1/4/6180:6183,1/4/6194:6196 | NA | NA |
94 | ➜ | 1/5/6:7,1/8/149:151 | NA | NA |
95 | ➜ | 1/5/12:14,1/8/143:144 | NA | NA |
96 | ➜ | 1/5/16:18,1/8/139:141 | NA | NA |
97 | ➜ | 1/5/26:27,1/5/55:57 | NA | NA |
98 | ➜ | 1/5/30:37,1/5/44:52 | NA | NA |
99 | ➜ | 1/5/81:88,1/5/96:102 | NA | NA |
100 | ➜ | 1/5/118:121,1/5/152:153 | NA | NA |
101 | ➜ | 1/5/121:122,1/5/147:152 | NA | NA |
102 | ➜ | 1/5/125:126,1/5/142:144 | NA | NA |
103 | ➜ | 1/5/168:173,1/5/263:267 | NA | NA |
104 | ➜ | 1/5/180:189,1/5/252:256 | NA | NA |
105 | ➜ | 1/5/195:196,1/5/244:246 | NA | NA |
106 | ➜ | 1/5/199:201,1/5/214:215 | NA | NA |
107 | ➜ | 1/5/339:342,1/8/32:33 | NA | NA |
108 | ➜ | 1/5/348:350,1/8/25:26 | NA | NA |
109 | ➜ | 1/5/387:390,1/5/401:414 | NA | NA |
110 | ➜ | 1/5/415:421,1/8/13:19 | NA | NA |
111 | ➜ | 1/5/443:446,1/5/1300:1304 | NA | NA |
112 | ➜ | 1/5/448:451,1/5/1296:1298 | NA | NA |
113 | ➜ | 1/5/459:460,1/5/695:697 | NA | NA |
114 | ➜ | 1/5/462:464,1/5/691:693 | NA | NA |
115 | ➜ | 1/5/466:473,1/5/681:689 | NA | NA |
116 | ➜ | 1/5/480:485,1/5/671:674 | NA | NA |
117 | ➜ | 1/5/487:488,1/5/665:669 | NA | NA |
118 | ➜ | 1/5/491:493,1/5/661:662 | NA | NA |
119 | ➜ | 1/5/497:499,1/5/656:657 | NA | NA |
120 | ➜ | 1/5/505:510,1/5/649:653 | NA | NA |
121 | ➜ | 1/5/709:710,1/5/1286:1288 | NA | NA |
122 | ➜ | 1/5/723:724,1/5/942:945 | NA | NA |
123 | ➜ | 1/5/727:731,1/5/938:939 | NA | NA |
124 | ➜ | 1/5/732:735,1/5/928:937 | NA | NA |
125 | ➜ | 1/5/737:740,1/5/923:926 | NA | NA |
126 | ➜ | 1/5/740:743,1/5/921:923 | NA | NA |
127 | ➜ | 1/5/745:753,1/5/910:919 | NA | NA |
128 | ➜ | 1/5/980:982,1/5/1273:1275 | NA | NA |
129 | ➜ | 1/5/1074:1077,1/5/1233:1236 | NA | NA |
130 | ➜ | 1/5/1077:1081,1/5/1218:1233 | NA | NA |
131 | ➜ | 1/5/1082:1084,1/5/1213:1217 | NA | NA |
132 | ➜ | 1/5/1086:1087,1/5/1209:1211 | NA | NA |
133 | ➜ | 1/5/1097:1098,1/5/1197:1199 | NA | NA |
134 | ➜ | 1/5/1099:1169,1/5/1192:1196 | NA | NA |
135 | ➜ | 1/5/1173:1175,1/5/1186:1188 | NA | NA |
136 | ➜ | 1/5/1357:1360,1/5/1379:1382 | NA | NA |
137 | ➜ | 1/5/1360:1361,1/5/1376:1379 | NA | NA |
138 | ➜ | 1/5/1425:1429,1/5/1455:1460 | NA | NA |
139 | ➜ | 1/5/1430:1434,1/5/1450:1454 | NA | NA |
140 | ➜ | 1/5/1467:1469,1/5/1495:1498 | NA | NA |
141 | ➜ | 1/5/1474:1476,1/5/1489:1490 | NA | NA |
142 | ➜ | 1/5/1520:1522,1/5/1655:1657 | NA | NA |
143 | ➜ | 1/5/1522:1526,1/5/1648:1655 | NA | NA |
144 | ➜ | 1/5/1550:1551,1/5/1576:1578 | NA | NA |
145 | ➜ | 1/5/1551:1555,1/5/1572:1576 | NA | NA |
146 | ➜ | 1/5/1586:1589,1/5/1605:1607 | NA | NA |
147 | ➜ | 1/5/1590:1592,1/5/1603:1604 | NA | NA |
148 | ➜ | 1/5/1624:1626,1/5/1636:1640 | NA | NA |
149 | ➜ | 1/5/1671:1673,1/5/1682:1684 | NA | NA |
150 | ➜ | 1/5/1685:1688,1/5/1848:1852 | NA | NA |
151 | ➜ | 1/5/1694:1722,1/5/1840:1842 | NA | NA |
152 | ➜ | 1/5/1723:1725,1/5/1838:1839 | NA | NA |
153 | ➜ | 1/5/1732:1738,1/5/1790:1797 | NA | NA |
154 | ➜ | 1/5/1739:1745,1/5/1785:1789 | NA | NA |
155 | ➜ | 1/5/1746:1749,1/5/1781:1784 | NA | NA |
156 | ➜ | 1/5/1749:1751,1/5/1779:1781 | NA | NA |
157 | ➜ | 1/5/1753:1761,1/5/1771:1777 | NA | NA |
158 | ➜ | 1/5/1858:1861,1/5/1873:1876 | NA | NA |
159 | ➜ | 1/5/1861:1863,1/5/1871:1873 | NA | NA |
160 | ➜ | 1/5/1905:1909,1/5/2067:2071 | NA | NA |
161 | ➜ | 1/5/1911:1918,1/5/2064:2065 | NA | NA |
162 | ➜ | 1/5/1918:1920,1/5/2063:2064 | NA | NA |
163 | ➜ | 1/5/1920:1922,1/5/2062:2063 | NA | NA |
164 | ➜ | 1/5/1926:1933,1/5/2053:2058 | NA | NA |
165 | ➜ | 1/5/1933:1944,1/5/2038:2053 | NA | NA |
166 | ➜ | 1/5/1946:1948,1/5/2035:2036 | NA | NA |
167 | ➜ | 1/5/1957:1966,1/5/2021:2026 | NA | NA |
168 | ➜ | 1/5/1973:1978,1/5/1988:1993 | NA | NA |
169 | ➜ | 1/5/2001:2005,1/5/2014:2016 | NA | NA |
170 | ➜ | 1/5/2082:2085,1/5/2272:2274 | NA | NA |
171 | ➜ | 1/5/2290:2292,1/5/2342:2345 | NA | NA |
172 | ➜ | 1/5/2299:2301,1/5/2334:2335 | NA | NA |
173 | ➜ | 1/5/2302:2309,1/5/2329:2333 | NA | NA |
174 | ➜ | 1/5/2312:2314,1/5/2325:2326 | NA | NA |
175 | ➜ | 1/5/2358:2364,1/5/3858:3863 | NA | NA |
176 | ➜ | 1/5/2415:2419,1/5/2427:2429 | NA | NA |
177 | ➜ | 1/5/2446:2450,1/5/2509:2514 | NA | NA |
178 | ➜ | 1/5/2476:2479,1/5/2499:2501 | NA | NA |
179 | ➜ | 1/5/2541:2547,1/5/2772:2775 | NA | NA |
180 | ➜ | 1/5/2549:2550,1/5/2768:2770 | NA | NA |
181 | ➜ | 1/5/2589:2593,1/5/2752:2756 | NA | NA |
182 | ➜ | 1/5/2613:2614,1/5/2724:2726 | NA | NA |
183 | ➜ | 1/5/2614:2615,1/5/2722:2724 | NA | NA |
184 | ➜ | 1/5/2646:2648,1/5/2685:2688 | NA | NA |
185 | ➜ | 1/5/2651:2653,1/5/2681:2682 | NA | NA |
186 | ➜ | 1/5/2656:2662,1/5/2672:2678 | NA | NA |
187 | ➜ | 1/5/2704:2705,1/5/2710:2712 | NA | NA |
188 | ➜ | 1/5/2832:2838,1/5/3850:3853 | NA | NA |
189 | ➜ | 1/5/2844:2846,1/5/3842:3844 | NA | NA |
190 | ➜ | 1/5/2847:2850,1/5/3840:3841 | NA | NA |
191 | ➜ | 1/5/2850:2855,1/5/3837:3840 | NA | NA |
192 | ➜ | 1/5/2867:2872,1/5/2877:2883 | NA | NA |
193 | ➜ | 1/5/2889:2891,1/5/3610:3612 | NA | NA |
194 | ➜ | 1/5/2896:2897,1/5/3602:3605 | NA | NA |
195 | ➜ | 1/5/3632:3633,1/5/3827:3829 | NA | NA |
196 | ➜ | 1/5/3659:3665,1/5/3677:3685 | NA | NA |
197 | ➜ | 1/5/3700:3703,1/5/3749:3750 | NA | NA |
198 | ➜ | 1/5/3703:3705,1/5/3745:3749 | NA | NA |
199 | ➜ | 1/5/3707:3710,1/5/3741:3743 | NA | NA |
200 | ➜ | 1/5/3710:3714,1/5/3739:3741 | NA | NA |
201 | ➜ | 1/5/3714:3720,1/5/3734:3739 | NA | NA |
202 | ➜ | 1/5/3720:3721,1/5/3732:3734 | NA | NA |
203 | ➜ | 1/5/3780:3781,1/5/3811:3814 | NA | NA |
204 | ➜ | 1/5/3781:3794,1/5/3806:3811 | NA | NA |
205 | ➜ | 1/5/3895:3898,1/5/4563:4565 | NA | NA |
206 | ➜ | 1/5/3900:3902,1/5/4558:4561 | NA | NA |
207 | ➜ | 1/5/3913:3915,1/5/4388:4389 | NA | NA |
208 | ➜ | 1/5/3916:3917,1/5/4384:4387 | NA | NA |
209 | ➜ | 1/5/3927:3930,1/5/4180:4184 | NA | NA |
210 | ➜ | 1/5/3948:3949,1/5/4063:4065 | NA | NA |
211 | ➜ | 1/5/3949:3952,1/5/4060:4063 | NA | NA |
212 | ➜ | 1/5/3954:3968,1/5/4053:4058 | NA | NA |
213 | ➜ | 1/5/3970:3973,1/5/4038:4051 | NA | NA |
214 | ➜ | 1/5/4082:4088,1/5/4161:4164 | NA | NA |
215 | ➜ | 1/5/4094:4100,1/5/4108:4114 | NA | NA |
216 | ➜ | 1/5/4191:4192,1/5/4202:4204 | NA | NA |
217 | ➜ | 1/5/4243:4245,1/5/4263:4267 | NA | NA |
218 | ➜ | 1/5/4291:4294,1/5/4316:4318 | NA | NA |
219 | ➜ | 1/5/4295:4298,1/5/4312:4315 | NA | NA |
220 | ➜ | 1/5/4347:4350,1/5/4364:4365 | NA | NA |
221 | ➜ | 1/5/4400:4401,1/5/4442:4444 | NA | NA |
222 | ➜ | 1/5/4401:4403,1/5/4440:4442 | NA | NA |
223 | ➜ | 1/5/4403:4405,1/5/4439:4440 | NA | NA |
224 | ➜ | 1/5/4405:4407,1/5/4435:4439 | NA | NA |
225 | ➜ | 1/5/4412:4416,1/5/4426:4430 | NA | NA |
226 | ➜ | 1/5/4453:4454,1/5/4526:4528 | NA | NA |
227 | ➜ | 1/5/4456:4458,1/5/4520:4524 | NA | NA |
228 | ➜ | 1/5/4458:4459,1/5/4517:4520 | NA | NA |
229 | ➜ | 1/5/4466:4471,1/5/4484:4491 | NA | NA |
230 | ➜ | 1/5/4537:4539,1/5/4546:4549 | NA | NA |
231 | ➜ | 1/5/4580:4582,1/5/4721:4723 | NA | NA |
232 | ➜ | 1/5/4582:4585,1/5/4717:4721 | NA | NA |
233 | ➜ | 1/5/4590:4592,1/5/4618:4620 | NA | NA |
234 | ➜ | 1/5/4596:4603,1/5/4608:4614 | NA | NA |
235 | ➜ | 1/5/4624:4629,1/5/4669:4673 | NA | NA |
236 | ➜ | 1/5/4632:4637,1/5/4662:4666 | NA | NA |
237 | ➜ | 1/5/4638:4640,1/5/4659:4661 | NA | NA |
238 | ➜ | 1/5/4641:4642,1/5/4655:4658 | NA | NA |
239 | ➜ | 1/5/4680:4685,1/5/4705:4710 | NA | NA |
240 | ➜ | 1/5/4737:4743,1/5/4957:4962 | NA | NA |
241 | ➜ | 1/5/4743:4746,1/5/4954:4957 | NA | NA |
242 | ➜ | 1/5/4756:4766,1/5/4868:4877 | NA | NA |
243 | ➜ | 1/5/4769:4773,1/5/4862:4865 | NA | NA |
244 | ➜ | 1/5/4885:4888,1/5/4931:4934 | NA | NA |
245 | ➜ | 1/5/4890:4896,1/5/4924:4929 | NA | NA |
246 | ➜ | 1/5/4896:4899,1/5/4920:4924 | NA | NA |
247 | ➜ | 1/5/4992:4994,1/5/5057:5059 | NA | NA |
248 | ➜ | 1/5/4996:4997,1/5/5053:5055 | NA | NA |
249 | ➜ | 1/5/5000:5003,1/5/5044:5050 | NA | NA |
250 | ➜ | 1/5/5003:5009,1/5/5039:5044 | NA | NA |
251 | ➜ | 1/5/5012:5014,1/5/5035:5036 | NA | NA |
252 | ➜ | 1/5/5014:5017,1/5/5032:5035 | NA | NA |
253 | ➜ | 1/7/15:16,1/7/62:64 | NA | NA |
254 | ➜ | 1/7/21:27,1/7/52:57 | NA | NA |
255 | ➜ | 1/7/27:29,1/7/48:52 | NA | NA |
256 | ➜ | 1/7/32:36,1/7/41:45 | NA | NA |
257 | ➜ | 1/7/71:78,1/7/98:104 | NA | NA |
258 | ➜ | 1/7/79:81,1/7/95:97 | NA | NA |
259 | ➜ | 1/7/82:85,1/7/92:94 | NA | NA |
260 | ➜ | 1/8/64:67,1/8/91:95 | NA | NA |
Problematic loops
No problematic loops
Valid loops
# | loop id | location | annotation | motif |
---|---|---|---|---|
1 | ➜ | 1/2/7:17 | NA | NA |
2 | ➜ | 1/2/69:80 | NA | NA |
3 | ➜ | 1/2/156:162 | NA | NA |
4 | ➜ | 1/2/196:203 | NA | NA |
5 | ➜ | 1/2/288:295 | NA | NA |
6 | ➜ | 1/2/320:331 | NA | NA |
7 | ➜ | 1/2/377:387 | NA | NA |
8 | ➜ | 1/2/416:421 | NA | NA |
9 | ➜ | 1/2/441:452 | NA | NA |
10 | ➜ | 1/2/462:467 | NA | NA |
11 | ➜ | 1/2/498:504 | NA | NA |
12 | ➜ | 1/2/538:545 | NA | NA |
13 | ➜ | 1/2/569:581 | NA | NA |
14 | ➜ | 1/2/618:623 | NA | NA |
15 | ➜ | 1/2/696:730 | NA | NA |
16 | ➜ | 1/2/820:828 | NA | NA |
17 | ➜ | 1/2/833:841 | NA | NA |
18 | ➜ | 1/2/883:903 | NA | NA |
19 | ➜ | 1/2/956:967 | NA | NA |
20 | ➜ | 1/2/994:999 | NA | NA |
21 | ➜ | 1/2/1054:1064 | NA | NA |
22 | ➜ | 1/2/1114:1119 | NA | NA |
23 | ➜ | 1/2/1141:1146 | NA | NA |
24 | ➜ | 1/2/1178:1183 | NA | NA |
25 | ➜ | 1/2/1245:1254 | NA | NA |
26 | ➜ | 1/2/1294:1305 | NA | NA |
27 | ➜ | 1/2/1353:1358 | NA | NA |
28 | ➜ | 1/2/1366:1373 | NA | NA |
29 | ➜ | 1/2/1416:1424 | NA | NA |
30 | ➜ | 1/2/1460:1466 | NA | NA |
31 | ➜ | 1/2/1565:1570 | NA | NA |
32 | ➜ | 1/2/1614:1625 | NA | NA |
33 | ➜ | 1/2/1658:1666 | NA | NA |
34 | ➜ | 1/2/1759:1773 | NA | NA |
35 | ➜ | 1/2/1847:1852 | NA | NA |
36 | ➜ | 1/3/12:24 | NA | NA |
37 | ➜ | 1/3/31:41 | NA | NA |
38 | ➜ | 1/3/48:56 | NA | NA |
39 | ➜ | 1/3/64:72 | NA | NA |
40 | ➜ | 1/4/6053:6073 | NA | NA |
41 | ➜ | 1/4/6110:6115 | NA | NA |
42 | ➜ | 1/4/6141:6147 | NA | NA |
43 | ➜ | 1/4/6183:6194 | NA | NA |
44 | ➜ | 1/5/37:44 | NA | NA |
45 | ➜ | 1/5/68:73 | NA | NA |
46 | ➜ | 1/5/89:95 | NA | NA |
47 | ➜ | 1/5/131:137 | NA | NA |
48 | ➜ | 1/5/204:211 | NA | NA |
49 | ➜ | 1/5/222:226 | NA | NA |
50 | ➜ | 1/5/230:238 | NA | NA |
51 | ➜ | 1/5/289:298 | NA | NA |
52 | ➜ | 1/5/314:323 | NA | NA |
53 | ➜ | 1/5/368:373 | NA | NA |
54 | ➜ | 1/5/392:399 | NA | NA |
55 | ➜ | 1/5/519:642 | NA | NA |
56 | ➜ | 1/5/759:904 | NA | NA |
57 | ➜ | 1/5/1178:1183 | NA | NA |
58 | ➜ | 1/5/1317:1326 | NA | NA |
59 | ➜ | 1/5/1363:1374 | NA | NA |
60 | ➜ | 1/5/1389:1394 | NA | NA |
61 | ➜ | 1/5/1404:1413 | NA | NA |
62 | ➜ | 1/5/1436:1448 | NA | NA |
63 | ➜ | 1/5/1479:1486 | NA | NA |
64 | ➜ | 1/5/1561:1566 | NA | NA |
65 | ➜ | 1/5/1593:1602 | NA | NA |
66 | ➜ | 1/5/1627:1635 | NA | NA |
67 | ➜ | 1/5/1675:1680 | NA | NA |
68 | ➜ | 1/5/1761:1771 | NA | NA |
69 | ➜ | 1/5/1814:1824 | NA | NA |
70 | ➜ | 1/5/1864:1870 | NA | NA |
71 | ➜ | 1/5/1885:1894 | NA | NA |
72 | ➜ | 1/5/1978:1988 | NA | NA |
73 | ➜ | 1/5/2005:2014 | NA | NA |
74 | ➜ | 1/5/2087:2270 | NA | NA |
75 | ➜ | 1/5/2317:2322 | NA | NA |
76 | ➜ | 1/5/2375:2385 | NA | NA |
77 | ➜ | 1/5/2419:2427 | NA | NA |
78 | ➜ | 1/5/2458:2463 | NA | NA |
79 | ➜ | 1/5/2487:2491 | NA | NA |
80 | ➜ | 1/5/2523:2532 | NA | NA |
81 | ➜ | 1/5/2561:2566 | NA | NA |
82 | ➜ | 1/5/2578:2583 | NA | NA |
83 | ➜ | 1/5/2622:2634 | NA | NA |
84 | ➜ | 1/5/2664:2670 | NA | NA |
85 | ➜ | 1/5/2705:2710 | NA | NA |
86 | ➜ | 1/5/2738:2742 | NA | NA |
87 | ➜ | 1/5/2792:2799 | NA | NA |
88 | ➜ | 1/5/2810:2816 | NA | NA |
89 | ➜ | 1/5/2872:2877 | NA | NA |
90 | ➜ | 1/5/2900:3599 | NA | NA |
91 | ➜ | 1/5/3614:3618 | NA | NA |
92 | ➜ | 1/5/3639:3649 | NA | NA |
93 | ➜ | 1/5/3668:3674 | NA | NA |
94 | ➜ | 1/5/3722:3731 | NA | NA |
95 | ➜ | 1/5/3757:3767 | NA | NA |
96 | ➜ | 1/5/3796:3804 | NA | NA |
97 | ➜ | 1/5/3873:3882 | NA | NA |
98 | ➜ | 1/5/4193:4201 | NA | NA |
99 | ➜ | 1/5/4210:4222 | NA | NA |
100 | ➜ | 1/5/4249:4259 | NA | NA |
101 | ➜ | 1/5/4270:4277 | NA | NA |
102 | ➜ | 1/5/4301:4309 | NA | NA |
103 | ➜ | 1/5/4321:4326 | NA | NA |
104 | ➜ | 1/5/4352:4362 | NA | NA |
105 | ➜ | 1/5/4417:4425 | NA | NA |
106 | ➜ | 1/5/4474:4481 | NA | NA |
107 | ➜ | 1/5/4494:4506 | NA | NA |
108 | ➜ | 1/5/4540:4545 | NA | NA |
109 | ➜ | 1/5/4603:4608 | NA | NA |
110 | ➜ | 1/5/4645:4652 | NA | NA |
111 | ➜ | 1/5/4688:4702 | NA | NA |
112 | ➜ | 1/5/4776:4859 | NA | NA |
113 | ➜ | 1/5/4906:4915 | NA | NA |
114 | ➜ | 1/5/4975:4983 | NA | NA |
115 | ➜ | 1/5/5021:5028 | NA | NA |
116 | ➜ | 1/7/36:41 | NA | NA |
117 | ➜ | 1/7/86:91 | NA | NA |
118 | ➜ | 1/8/47:56 | NA | NA |
119 | ➜ | 1/8/68:90 | NA | NA |
120 | ➜ | 1/8/107:112 | NA | NA |
121 | ➜ | 1/8/121:129 | NA | NA |
Problematic loops
No problematic loops
Valid loops
# | loop id | location | annotation | motif |
---|---|---|---|---|
1 | ➜ | 1/2/40:41,1/2/481:487,1/2/512:514 | NA | NA |
2 | ➜ | 1/2/816:819,1/2/829:831,1/2/843:848 | NA | NA |
3 | ➜ | 1/2/938:941,1/2/985:993,1/2/1000:1004 | NA | NA |
4 | ➜ | 1/2/1094:1096,1/2/1136:1140,1/2/1147:1151 | NA | NA |
5 | ➜ | 1/2/1218:1221,1/2/1645:1651,1/2/1673:1680 | NA | NA |
6 | ➜ | 1/2/1225:1229,1/2/1529:1532,1/2/1638:1641 | NA | NA |
7 | ➜ | 1/2/1237:1244,1/2/1255:1266,1/2/1516:1520 | NA | NA |
8 | ➜ | 1/2/1272:1277,1/2/1320:1324,1/2/1504:1510 | NA | NA |
9 | ➜ | 1/2/1339:1345,1/2/1384:1389,1/2/1481:1487 | NA | NA |
10 | ➜ | 1/2/1350:1351,1/2/1360:1363,1/2/1375:1379 | NA | NA |
11 | ➜ | 1/2/1532:1536,1/2/1597:1604,1/2/1635:1638 | NA | NA |
12 | ➜ | 1/5/112:116,1/5/155:160,1/5/275:278 | NA | NA |
13 | ➜ | 1/5/380:387,1/5/414:415,1/8/19:20 | NA | NA |
14 | ➜ | 1/5/982:984,1/5/1070:1074,1/5/1236:1273 | NA | NA |
15 | ➜ | 1/5/1531:1537,1/5/1622:1624,1/5/1640:1643 | NA | NA |
16 | ➜ | 1/5/1545:1548,1/5/1580:1584,1/5/1609:1614 | NA | NA |
17 | ➜ | 1/5/1969:1973,1/5/1993:2001,1/5/2016:2018 | NA | NA |
18 | ➜ | 1/5/2393:2399,1/5/2805:2807,1/5/2819:2822 | NA | NA |
19 | ➜ | 1/5/2402:2405,1/5/2785:2791,1/5/2800:2802 | NA | NA |
20 | ➜ | 1/5/2440:2445,1/5/2515:2519,1/5/2536:2537 | NA | NA |
21 | ➜ | 1/5/2551:2555,1/5/2572:2575,1/5/2757:2767 | NA | NA |
22 | ➜ | 1/5/2575:2576,1/5/2585:2589,1/5/2756:2757 | NA | NA |
23 | ➜ | 1/5/3937:3939,1/5/4074:4079,1/5/4167:4173 | NA | NA |
24 | ➜ | 1/5/4241:4243,1/5/4267:4270,1/5/4277:4283 | NA | NA |
25 | ➜ | 1/5/4463:4466,1/5/4491:4494,1/5/4506:4513 | NA | NA |
26 | ➜ | 1/5/4970:4975,1/5/4983:4991,1/5/5060:5063 | NA | NA |
27 | ➜ | 1/7/9:14,1/7/65:67,1/7/108:110 | NA | NA |
28 | ➜ | 1/8/44:45,1/8/58:64,1/8/95:99 | NA | NA |
Problematic loops
No problematic loops
Coloring options: