6NQB Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/12:22 | NA | NA | ||
| 1/A/158:163 | NA | NA | ||
| 1/A/186:191 | NA | NA | ||
| 1/A/258:268 | NA | NA | ||
| 1/A/296:301 | NA | NA | ||
| 1/A/320:333 | NA | NA | ||
| 1/A/342:347 | NA | NA | ||
| 1/A/379:384 | NA | NA | ||
| 1/A/419:424 | NA | NA | ||
| 1/A/522:527 | NA | NA | ||
| 1/A/617:623 | NA | NA | ||
| 1/A/726:731 | NA | NA | ||
| 1/A/897:902 | NA | NA | ||
| 1/A/962:973 | NA | NA | ||
| 1/A/1010:1019 | NA | NA | ||
| 1/A/1028:1033 | NA | NA | ||
| 1/A/1076:1081 | NA | NA | ||
| 1/A/1089:1096 | NA | NA | ||
| 1/A/1134:1140 | NA | NA | ||
| 1/A/1264:1271 | NA | NA | ||
| 1/A/1314:1323 | NA | NA | ||
| 1/A/1355:1367 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6NQB_002 | NA | ||
| HL_6NQB_005 | NA | ||
| HL_6NQB_012 | NA | ||
| HL_6NQB_016 | NA | ||
| HL_6NQB_017 | NA | ||
| HL_6NQB_025 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/30:32, 1/A/552:553 | NA | NA | ||
| 1/A/43:45, 1/A/396:399 | NA | NA | ||
| 1/A/54:56, 1/A/356:357 | NA | NA | ||
| 1/A/63:66, 1/A/103:104 | NA | NA | ||
| 1/A/66:69, 1/A/99:103 | NA | NA | ||
| 1/A/75:76, 1/A/93:95 | NA | NA | ||
| 1/A/128:132, 1/A/230:233 | NA | NA | ||
| 1/A/132:136, 1/A/227:230 | NA | NA | ||
| 1/A/144:146, 1/A/176:178 | NA | NA | ||
| 1/A/147:153, 1/A/168:175 | NA | NA | ||
| 1/A/242:247, 1/A/277:284 | NA | NA | ||
| 1/A/249:252, 1/A/274:275 | NA | NA | ||
| 1/A/292:295, 1/A/302:308 | NA | NA | ||
| 1/A/367:375, 1/A/389:393 | NA | NA | ||
| 1/A/375:376, 1/A/387:389 | NA | NA | ||
| 1/A/409:416, 1/A/427:433 | NA | NA | ||
| 1/A/445:450, 1/A/483:489 | NA | NA | ||
| 1/A/450:455, 1/A/477:483 | NA | NA | ||
| 1/A/504:511, 1/A/540:541 | NA | NA | ||
| 1/A/515:521, 1/A/528:536 | NA | NA | ||
| 1/A/578:584, 1/A/757:763 | NA | NA | ||
| 1/A/594:598, 1/A/640:645 | NA | NA | ||
| 1/A/605:612, 1/A/628:633 | NA | NA | ||
| 1/A/654:655, 1/A/751:754 | NA | NA | ||
| 1/A/658:660, 1/A/745:748 | NA | NA | ||
| 1/A/662:666, 1/A/740:743 | NA | NA | ||
| 1/A/824:829, 1/A/857:876 | NA | NA | ||
| 1/A/887:894, 1/A/905:910 | NA | NA | ||
| 1/A/925:930, 1/A/1387:1391 | NA | NA | ||
| 1/A/933:936, 1/A/1379:1384 | NA | NA | ||
| 1/A/997:1002, 1/A/1038:1044 | NA | NA | ||
| 1/A/1051:1058, 1/A/1199:1207 | NA | NA | ||
| 1/A/1059:1061, 1/A/1195:1198 | NA | NA | ||
| 1/A/1061:1063, 1/A/1193:1195 | NA | NA | ||
| 1/A/1121:1129, 1/A/1143:1152 | NA | NA | ||
| 1/A/1129:1133, 1/A/1141:1143 | NA | NA | ||
| 1/A/1158:1161, 1/A/1175:1181 | NA | NA | ||
| 1/A/1246:1253, 1/A/1284:1291 | NA | NA | ||
| 1/A/1255:1258, 1/A/1277:1282 | NA | NA | ||
| 1/A/1259:1263, 1/A/1272:1276 | NA | NA | ||
| 1/A/1303:1308, 1/A/1329:1334 | NA | NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6NQB_006 | NA | ||
| IL_6NQB_012 | NA | ||
| IL_6NQB_019 | NA | ||
| IL_6NQB_030 | NA |
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/A/46:52, 1/A/359:367, 1/A/393:395 | NA | NA | ||
| 1/A/586:588, 1/A/651:654, 1/A/754:755 | NA | NA | ||
| 1/A/955:962, 1/A/973:984, 1/A/1221:1225 | NA | NA | ||
| 1/A/990:997, 1/A/1044:1051, 1/A/1207:1215 | NA | NA | ||
| 1/A/1002:1008, 1/A/1021:1027, 1/A/1034:1038 | NA | NA | ||
| 1/A/1063:1068, 1/A/1107:1113, 1/A/1187:1193 | NA | NA | ||
| 1/A/1072:1075, 1/A/1082:1087, 1/A/1098:1103 | NA | NA | ||
| 1/A/1115:1121, 1/A/1152:1158, 1/A/1181:1185 | NA | NA |
Problematic loops
No problematic loops
Coloring options: