6P5I Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6P5I_001 | 1/1/6444:6460 | No text annotation Not in a motif group | geometric HL_5TBW_044 HL_05667.1 | |
| HL_6P5I_002 | 1/1/6497:6502 | No text annotation Not in a motif group | geometric HL_5SWD_005 HL_69353.7 | |
| HL_6P5I_003 | 1/1/6520:6528 | No text annotation Not in a motif group | ||
| HL_6P5I_004 | 1/1/6560:6570 | No text annotation Not in a motif group | geometric HL_4V83_139 HL_16135.1 | |
| HL_6P5I_005 | 1/1/6584:6591 | No text annotation Not in a motif group | ||
| HL_6P5I_006 | 1/2/7:17 | No text annotation Not in a motif group | homologous HL_4V88_186 HL_67265.4 | |
| HL_6P5I_007 | 1/2/69:80 | No text annotation Not in a motif group | ||
| HL_6P5I_008 | 1/2/156:162 | Other HL Not in a motif group | homologous HL_4V88_188 HL_43074.18 | |
| HL_6P5I_009 | 1/2/196:203 | No text annotation Not in a motif group | geometric HL_5J7L_154 HL_93727.5 | |
| HL_6P5I_010 | 1/2/288:295 | T-loop with 1 bulged base Not in a motif group | geometric HL_4V88_191 HL_68493.6 | |
| HL_6P5I_012 | 1/2/377:387 | No text annotation Not in a motif group | ||
| HL_6P5I_013 | 1/2/416:421 | No text annotation Not in a motif group | homologous HL_4V88_194 HL_18785.1 | |
| HL_6P5I_014 | 1/2/441:452 | No text annotation Not in a motif group | homologous HL_4V88_195 HL_22443.1 | |
| HL_6P5I_015 | 1/2/462:467 | UNCG Not in a motif group | homologous HL_4V88_196 HL_79299.11 | |
| HL_6P5I_016 | 1/2/498:504 | No text annotation Not in a motif group | homologous HL_4V88_197 HL_50374.1 | |
| HL_6P5I_017 | 1/2/538:545 | No text annotation Not in a motif group | geometric HL_7A0S_056 HL_93727.5 | |
| HL_6P5I_018 | 1/2/569:581 | No text annotation Not in a motif group | homologous HL_4V88_199 HL_17086.2 | |
| HL_6P5I_019 | 1/2/618:623 | Other HL Not in a motif group | homologous HL_4V88_200 HL_43074.18 | |
| HL_6P5I_020 | 1/2/820:828 | No text annotation Not in a motif group | homologous HL_4V88_203 HL_72066.1 | |
| HL_6P5I_022 | 1/2/884:902 | No text annotation Not in a motif group | ||
| HL_6P5I_023 | 1/2/957:966 | No text annotation Not in a motif group | homologous HL_4V88_206 HL_87219.4 | |
| HL_6P5I_024 | 1/2/994:999 | Other HL Not in a motif group | homologous HL_4V88_207 HL_43074.18 | |
| HL_6P5I_025 | 1/2/1054:1064 | No text annotation Not in a motif group | homologous HL_4V88_208 HL_87219.4 | |
| HL_6P5I_026 | 1/2/1113:1120 | No text annotation Not in a motif group | geometric HL_5J7L_014 HL_26055.6 | |
| HL_6P5I_027 | 1/2/1141:1146 | Other HL Not in a motif group | homologous HL_4V88_210 HL_43074.18 | |
| HL_6P5I_028 | 1/2/1178:1183 | GNRA Not in a motif group | homologous HL_4V88_211 HL_43074.18 | |
| HL_6P5I_029 | 1/2/1245:1254 | No text annotation Not in a motif group | homologous HL_4V88_212 HL_96854.1 | |
| HL_6P5I_030 | 1/2/1294:1305 | No text annotation Not in a motif group | ||
| HL_6P5I_031 | 1/2/1353:1358 | GNRA Not in a motif group | homologous HL_4V88_214 HL_43074.18 | |
| HL_6P5I_032 | 1/2/1366:1373 | No text annotation Not in a motif group | homologous HL_4V88_215 HL_54035.7 | |
| HL_6P5I_034 | 1/2/1460:1466 | No text annotation Not in a motif group | homologous HL_4V88_217 HL_67216.5 | |
| HL_6P5I_035 | 1/2/1565:1570 | GNRA Not in a motif group | homologous HL_4V88_218 HL_43074.18 | |
| HL_6P5I_036 | 1/2/1614:1625 | No text annotation Not in a motif group | homologous HL_4V88_219 HL_32458.3 | |
| HL_6P5I_037 | 1/2/1658:1666 | No text annotation Not in a motif group | homologous HL_4V88_220 HL_01181.4 | |
| HL_6P5I_039 | 1/2/1847:1852 | Other HL Not in a motif group | homologous HL_4V88_222 HL_43074.18 | |
| HL_6P5I_040 | 1/5/37:44 | No text annotation Not in a motif group | geometric HL_4V9F_006 HL_23481.5 | |
| HL_6P5I_041 | 1/5/68:73 | No text annotation Not in a motif group | homologous HL_5TBW_002 HL_96776.3 | |
| HL_6P5I_042 | 1/5/89:95 | No text annotation Not in a motif group | homologous HL_5TBW_003 HL_67216.5 | |
| HL_6P5I_043 | 1/5/131:137 | No text annotation Not in a motif group | geometric HL_4V88_198 HL_30541.1 | |
| HL_6P5I_044 | 1/5/204:211 | T-loop with 1 bulged base Not in a motif group | homologous HL_5TBW_005 HL_68493.6 | |
| HL_6P5I_045 | 1/5/222:226 | No text annotation Not in a motif group | homologous HL_5TBW_006 HL_98557.5 | |
| HL_6P5I_046 | 1/5/230:238 | No text annotation Not in a motif group | homologous HL_5TBW_007 HL_08002.6 | |
| HL_6P5I_047 | 1/5/289:298 | No text annotation Not in a motif group | homologous HL_5TBW_008 HL_54035.7 | |
| HL_6P5I_048 | 1/5/314:323 | No text annotation Not in a motif group | homologous HL_5TBW_009 HL_46142.8 | |
| HL_6P5I_049 | 1/5/368:373 | Other HL Not in a motif group | homologous HL_5TBW_010 HL_43074.18 | |
| HL_6P5I_050 | 1/5/393:398 | GNRA Not in a motif group | homologous HL_5TBW_011 HL_43074.18 | |
| HL_6P5I_051 | 1/5/521:641 | No text annotation Not in a motif group | ||
| HL_6P5I_052 | 1/5/759:903 | No text annotation Not in a motif group | ||
| HL_6P5I_053 | 1/5/962:970 | No text annotation Not in a motif group | geometric HL_2OEU_002 HL_28567.3 | |
| HL_6P5I_054 | 1/5/1177:1184 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_58912.1 | |
| HL_6P5I_055 | 1/5/1317:1326 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_014 HL_33239.17 | |
| HL_6P5I_056 | 1/5/1363:1374 | No text annotation Not in a motif group | geometric HL_2ZZM_002 HL_18218.2 | |
| HL_6P5I_057 | 1/5/1389:1394 | GNRA Not in a motif group | homologous HL_5TBW_016 HL_43074.18 | |
| HL_6P5I_058 | 1/5/1403:1414 | No text annotation Not in a motif group | ||
| HL_6P5I_059 | 1/5/1436:1448 | No text annotation Not in a motif group | geometric HL_1ZCI_002 HL_98885.3 | |
| HL_6P5I_060 | 1/5/1479:1486 | No text annotation Not in a motif group | geometric HL_6VMY_004 HL_16898.3 | |
| HL_6P5I_061 | 1/5/1561:1566 | GNRA Not in a motif group | homologous HL_5TBW_019 HL_43074.18 | |
| HL_6P5I_062 | 1/5/1593:1602 | No text annotation Not in a motif group | homologous HL_5TBW_020 HL_39334.5 | |
| HL_6P5I_063 | 1/5/1627:1635 | No text annotation Not in a motif group | ||
| HL_6P5I_064 | 1/5/1675:1680 | No text annotation Not in a motif group | homologous HL_5TBW_022 HL_15942.5 | |
| HL_6P5I_065 | 1/5/1761:1771 | No text annotation Not in a motif group | ||
| HL_6P5I_066 | 1/5/1816:1823 | No text annotation Not in a motif group | geometric HL_5TBW_024 HL_54035.7 | |
| HL_6P5I_067 | 1/5/1864:1870 | GNRA Not in a motif group | homologous HL_5TBW_025 HL_43074.18 | |
| HL_6P5I_068 | 1/5/1886:1893 | No text annotation Not in a motif group | homologous HL_5TBW_026 HL_72451.5 | |
| HL_6P5I_069 | 1/5/1973:1993 | No text annotation Not in a motif group | ||
| HL_6P5I_070 | 1/5/2005:2014 | No text annotation Not in a motif group | homologous HL_5TBW_028 HL_87219.4 | |
| HL_6P5I_071 | 1/5/2087:2270 | No text annotation Not in a motif group | ||
| HL_6P5I_072 | 1/5/2317:2322 | GNRA Not in a motif group | homologous HL_5TBW_030 HL_43074.18 | |
| HL_6P5I_073 | 1/5/2376:2384 | T-loop with 2 stacked bulged bases Not in a motif group | homologous HL_5TBW_031 HL_33239.17 | |
| HL_6P5I_074 | 1/5/2420:2426 | No text annotation Not in a motif group | homologous HL_5TBW_032 HL_86880.5 | |
| HL_6P5I_075 | 1/5/2458:2463 | Other HL Not in a motif group | homologous HL_5TBW_033 HL_43074.18 | |
| HL_6P5I_076 | 1/5/2486:2492 | No text annotation Not in a motif group | ||
| HL_6P5I_077 | 1/5/2523:2532 | No text annotation Not in a motif group | homologous HL_5TBW_035 HL_78457.4 | |
| HL_6P5I_078 | 1/5/2561:2566 | GNRA Not in a motif group | geometric HL_5J7L_004 HL_43074.18 | |
| HL_6P5I_079 | 1/5/2578:2583 | GNRA Not in a motif group | homologous HL_5TBW_036 HL_43074.18 | |
| HL_6P5I_080 | 1/5/2624:2632 | No text annotation Not in a motif group | homologous HL_5TBW_037 HL_73793.2 | |
| HL_6P5I_081 | 1/5/2664:2670 | Other HL Not in a motif group | geometric HL_4V9F_039 HL_68493.6 | |
| HL_6P5I_082 | 1/5/2705:2710 | No text annotation Not in a motif group | geometric HL_5NFV_001 HL_58912.1 | |
| HL_6P5I_083 | 1/5/2738:2742 | No text annotation Not in a motif group | homologous HL_5TBW_040 HL_69353.7 | |
| HL_6P5I_084 | 1/5/2792:2799 | No text annotation Not in a motif group | homologous HL_5TBW_041 HL_66171.3 | |
| HL_6P5I_085 | 1/5/2810:2816 | GNRA with one bulged base Not in a motif group | homologous HL_5TBW_042 HL_02361.6 | |
| HL_6P5I_086 | 1/5/2872:2877 | UNCG Not in a motif group | geometric HL_4V9F_044 HL_79299.11 | |
| HL_6P5I_087 | 1/5/2899:3600 | No text annotation Not in a motif group | ||
| HL_6P5I_088 | 1/5/3614:3618 | No text annotation Not in a motif group | homologous HL_5TBW_045 HL_99223.1 | |
| HL_6P5I_089 | 1/5/3639:3649 | No text annotation Not in a motif group | homologous HL_5TBW_046 HL_43613.4 | |
| HL_6P5I_090 | 1/5/3668:3674 | GNRA Not in a motif group | homologous HL_5TBW_047 HL_43074.18 | |
| HL_6P5I_091 | 1/5/3724:3729 | Other HL Not in a motif group | homologous HL_5TBW_048 HL_43074.18 | |
| HL_6P5I_092 | 1/5/3757:3767 | No text annotation Not in a motif group | homologous HL_5TBW_049 HL_98248.1 | |
| HL_6P5I_093 | 1/5/3796:3804 | No text annotation Not in a motif group | homologous HL_5TBW_050 HL_53760.4 | |
| HL_6P5I_094 | 1/5/3873:3882 | No text annotation Not in a motif group | homologous HL_5TBW_051 HL_90642.5 | |
| HL_6P5I_095 | 1/5/3976:4035 | No text annotation Not in a motif group | ||
| HL_6P5I_096 | 1/5/4193:4201 | No text annotation Not in a motif group | homologous HL_5TBW_054 HL_46891.3 | |
| HL_6P5I_097 | 1/5/4210:4222 | No text annotation Not in a motif group | homologous HL_5TBW_055 HL_19870.5 | |
| HL_6P5I_098 | 1/5/4250:4258 | No text annotation Not in a motif group | homologous HL_5TBW_056 HL_76406.3 | |
| HL_6P5I_099 | 1/5/4270:4277 | No text annotation Not in a motif group | homologous HL_5TBW_057 HL_46142.8 | |
| HL_6P5I_100 | 1/5/4301:4309 | No text annotation Not in a motif group | homologous HL_5TBW_058 HL_14725.1 | |
| HL_6P5I_101 | 1/5/4321:4326 | GNRA Not in a motif group | homologous HL_5TBW_059 HL_43074.18 | |
| HL_6P5I_102 | 1/5/4352:4362 | No text annotation Not in a motif group | geometric HL_4V83_139 HL_16135.1 | |
| HL_6P5I_103 | 1/5/4417:4425 | No text annotation Not in a motif group | homologous HL_5TBW_061 HL_36421.5 | |
| HL_6P5I_104 | 1/5/4474:4481 | No text annotation Not in a motif group | homologous HL_5TBW_062 HL_92681.5 | |
| HL_6P5I_105 | 1/5/4497:4503 | No text annotation Not in a motif group | geometric HL_5TBW_063 HL_26055.6 | |
| HL_6P5I_106 | 1/5/4540:4545 | GNRA Not in a motif group | homologous HL_5TBW_064 HL_43074.18 | |
| HL_6P5I_107 | 1/5/4603:4608 | GNRA Not in a motif group | geometric HL_4V9F_066 HL_43074.18 | |
| HL_6P5I_108 | 1/5/4646:4651 | Ribsomal LSU H95 Not in a motif group | homologous HL_5TBW_066 HL_67719.1 | |
| HL_6P5I_109 | 1/5/4688:4702 | No text annotation Not in a motif group | homologous HL_5TBW_067 HL_56677.5 | |
| HL_6P5I_110 | 1/5/4775:4860 | No text annotation Not in a motif group | geometric HL_4V9F_003 HL_94352.4 | |
| HL_6P5I_111 | 1/5/4904:4918 | No text annotation Not in a motif group | ||
| HL_6P5I_112 | 1/5/4975:4983 | No text annotation Not in a motif group | geometric HL_5J7L_201 HL_05018.6 | |
| HL_6P5I_113 | 1/5/5021:5028 | No text annotation Not in a motif group | ||
| HL_6P5I_114 | 1/7/36:41 | No text annotation Not in a motif group | geometric HL_5TBW_185 HL_02733.5 | |
| HL_6P5I_115 | 1/7/86:91 | GNRA Not in a motif group | homologous HL_5TBW_186 HL_43074.18 | |
| HL_6P5I_116 | 1/8/47:56 | No text annotation Not in a motif group | geometric HL_7RQB_001 HL_29414.1 | |
| HL_6P5I_118 | 1/8/107:112 | No text annotation Not in a motif group | ||
| HL_6P5I_119 | 1/8/121:129 | No text annotation Not in a motif group | geometric HL_7A0S_011 HL_98557.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6P5I_011 | No text annotation | ||
| HL_6P5I_021 | No text annotation | ||
| HL_6P5I_033 | No text annotation | ||
| HL_6P5I_038 | No text annotation | ||
| HL_6P5I_117 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6P5I_001 | 1/1/6491:6494, 1/1/6505:6513 | No text annotation Not in a motif group | ||
| IL_6P5I_002 | 1/2/23:25, 1/2/649:651 | No text annotation Not in a motif group | geometric IL_3MEI_002 IL_01312.13 | |
| IL_6P5I_003 | 1/2/34:36, 1/2/519:521 | UC cWW Not in a motif group | homologous IL_4V88_385 IL_01312.13 | |
| IL_6P5I_004 | 1/2/37:40, 1/2/514:518 | Double sheared Not in a motif group | geometric IL_4WF9_016 IL_09705.7 | |
| IL_6P5I_005 | 1/2/41:47, 1/2/479:481 | No text annotation Not in a motif group | geometric IL_4V88_387 IL_34626.4 | |
| IL_6P5I_006 | 1/2/49:51, 1/2/476:477 | Minor groove platform Not in a motif group | homologous IL_4V88_388 IL_06437.11 | |
| IL_6P5I_007 | 1/2/57:62, 1/2/86:88 | No text annotation Not in a motif group | homologous IL_4V88_389 IL_96451.1 | |
| IL_6P5I_008 | 1/2/63:68, 1/2/81:85 | No text annotation Not in a motif group | homologous IL_4V88_390 IL_59423.1 | |
| IL_6P5I_009 | 1/2/108:110, 1/2/351:353 | UU cWW Not in a motif group | geometric IL_4TS2_004 IL_01312.13 | |
| IL_6P5I_010 | 1/2/110:112, 1/2/349:351 | No text annotation Not in a motif group | geometric IL_1N33_070 IL_01312.13 | |
| IL_6P5I_011 | 1/2/112:115, 1/2/348:349 | Multiple bulged bases Not in a motif group | geometric IL_5WLH_001 IL_13730.12 | |
| IL_6P5I_012 | 1/2/116:121, 1/2/343:347 | No text annotation Not in a motif group | homologous IL_4V88_393 IL_76386.1 | |
| IL_6P5I_013 | 1/2/123:124, 1/2/339:341 | Minor groove platform Not in a motif group | geometric IL_4V88_412 IL_06437.11 | |
| IL_6P5I_015 | 1/2/145:152, 1/2/166:174 | No text annotation Not in a motif group | ||
| IL_6P5I_016 | 1/2/152:154, 1/2/164:166 | Isolated cWH basepair Not in a motif group | geometric IL_3R1C_018 IL_42589.6 | |
| IL_6P5I_017 | 1/2/188:192, 1/2/207:211 | Triple sheared Not in a motif group | geometric IL_4WFL_001 IL_56467.6 | |
| IL_6P5I_018 | 1/2/216:219, 1/2/302:309 | No text annotation Not in a motif group | ||
| IL_6P5I_020 | 1/2/312:314, 1/2/336:337 | Single bulged A Not in a motif group | homologous IL_4V88_399 IL_80007.16 | |
| IL_6P5I_021 | 1/2/317:320, 1/2/331:333 | No text annotation Not in a motif group | homologous IL_4V88_400 IL_05922.1 | |
| IL_6P5I_022 | 1/2/359:364, 1/2/396:403 | Kink-turn with non-sequential stacking Not in a motif group | homologous IL_4V88_402 IL_29549.9 | |
| IL_6P5I_023 | 1/2/366:371, 1/2/393:394 | No text annotation Not in a motif group | geometric IL_5Y58_001 IL_98882.3 | |
| IL_6P5I_024 | 1/2/411:413, 1/2/424:429 | No text annotation Not in a motif group | homologous IL_4V88_404 IL_46732.1 | |
| IL_6P5I_025 | 1/2/437:439, 1/2/454:456 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_405 IL_42589.6 | |
| IL_6P5I_026 | 1/2/459:461, 1/2/468:470 | Isolated near basepair Not in a motif group | homologous IL_4V88_406 IL_01312.13 | |
| IL_6P5I_027 | 1/2/487:489, 1/2/511:512 | Single bulged U Not in a motif group | homologous IL_4V88_407 IL_83039.11 | |
| IL_6P5I_028 | 1/2/491:495, 1/2/508:509 | C-loop Not in a motif group | geometric IL_5J7L_018 IL_08376.2 | |
| IL_6P5I_029 | 1/2/495:496, 1/2/506:508 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_59137.10 | |
| IL_6P5I_030 | 1/2/529:533, 1/2/551:556 | No text annotation Not in a motif group | ||
| IL_6P5I_031 | 1/2/533:537, 1/2/546:551 | No text annotation Not in a motif group | ||
| IL_6P5I_032 | 1/2/563:565, 1/2/585:592 | No text annotation Not in a motif group | ||
| IL_6P5I_033 | 1/2/566:569, 1/2/581:584 | Double sheared Not in a motif group | geometric IL_7RQB_089 IL_09705.7 | |
| IL_6P5I_034 | 1/2/599:608, 1/2/635:637 | No text annotation Not in a motif group | ||
| IL_6P5I_035 | 1/2/611:617, 1/2/624:632 | No text annotation Not in a motif group | homologous IL_4V88_415 IL_04667.1 | |
| IL_6P5I_036 | 1/2/663:665, 1/2/1162:1164 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_01312.13 | |
| IL_6P5I_037 | 1/2/665:671, 1/2/1161:1162 | No text annotation Not in a motif group | geometric IL_4LFB_022 IL_19222.1 | |
| IL_6P5I_038 | 1/2/673:675, 1/2/1030:1032 | No text annotation Not in a motif group | homologous IL_4V88_417 IL_01312.13 | |
| IL_6P5I_039 | 1/2/676:680, 1/2/1025:1029 | tSH-tHW-tHS Not in a motif group | homologous IL_4V88_418 IL_39521.5 | |
| IL_6P5I_040 | 1/2/690:696, 1/2/730:736 | No text annotation Not in a motif group | ||
| IL_6P5I_041 | 1/2/750:755, 1/2/789:793 | No text annotation Not in a motif group | geometric IL_5TBW_121 IL_05867.1 | |
| IL_6P5I_042 | 1/2/802:803, 1/2/860:863 | Major groove minor groove platform; mini C-loop Not in a motif group | homologous IL_4V88_423 IL_09061.4 | |
| IL_6P5I_043 | 1/2/805:807, 1/2/856:858 | No text annotation Not in a motif group | homologous IL_4V88_424 IL_01312.13 | |
| IL_6P5I_044 | 1/2/807:815, 1/2/849:856 | No text annotation Not in a motif group | homologous IL_4V88_425 IL_69091.1 | |
| IL_6P5I_045 | 1/2/877:879, 1/2/907:909 | AA cWW Not in a motif group | geometric IL_4V88_467 IL_01312.13 | |
| IL_6P5I_046 | 1/2/922:923, 1/2/1019:1022 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_4V88_428 IL_70995.6 | |
| IL_6P5I_047 | 1/2/924:927, 1/2/1014:1018 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_429 IL_85877.10 | |
| IL_6P5I_048 | 1/2/928:931, 1/2/1010:1013 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_430 IL_85877.10 | |
| IL_6P5I_049 | 1/2/931:935, 1/2/1007:1010 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_431 IL_85877.10 | |
| IL_6P5I_050 | 1/2/942:945, 1/2/981:984 | Tandem non-canonical cWW pairs Not in a motif group | homologous IL_4V88_432 IL_85877.10 | |
| IL_6P5I_051 | 1/2/952:956, 1/2/967:974 | Kink-turn Not in a motif group | homologous IL_4V88_434 IL_29549.9 | |
| IL_6P5I_052 | 1/2/1042:1047, 1/2/1071:1073 | Other IL Not in a motif group | homologous IL_4V88_435 IL_51590.1 | |
| IL_6P5I_053 | 1/2/1047:1051, 1/2/1067:1071 | tSH-tHW-tHS Not in a motif group | geometric IL_5J7L_037 IL_39521.5 | |
| IL_6P5I_054 | 1/2/1091:1093, 1/2/1152:1158 | No text annotation Not in a motif group | homologous IL_4V88_437 IL_19557.1 | |
| IL_6P5I_055 | 1/2/1098:1101, 1/2/1131:1134 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_438 IL_85877.10 | |
| IL_6P5I_056 | 1/2/1101:1103, 1/2/1129:1131 | No text annotation Not in a motif group | geometric IL_4WF9_083 IL_01312.13 | |
| IL_6P5I_057 | 1/2/1108:1110, 1/2/1123:1124 | Minor groove platform Not in a motif group | geometric IL_4V88_412 IL_06437.11 | |
| IL_6P5I_058 | 1/2/1168:1175, 1/2/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge Not in a motif group | homologous IL_4V88_440 IL_24606.1 | |
| IL_6P5I_059 | 1/2/1203:1204, 1/2/1694:1696 | Single bulged A Not in a motif group | homologous IL_4V88_441 IL_80007.16 | |
| IL_6P5I_060 | 1/2/1206:1208, 1/2/1691:1692 | Single bulged G Not in a motif group | homologous IL_4V88_442 IL_59137.10 | |
| IL_6P5I_061 | 1/2/1214:1217, 1/2/1681:1685 | C-loop Not in a motif group | homologous IL_4V88_443 IL_63596.4 | |
| IL_6P5I_062 | 1/2/1227:1228, 1/2/1530:1532 | Single stack bend Not in a motif group | geometric IL_4C7O_002 IL_72766.2 | |
| IL_6P5I_063 | 1/2/1230:1232, 1/2/1526:1528 | No text annotation Not in a motif group | homologous IL_4V88_444 IL_01312.13 | |
| IL_6P5I_064 | 1/2/1235:1236, 1/2/1521:1523 | Minor groove platform Not in a motif group | homologous IL_4V88_445 IL_06437.11 | |
| IL_6P5I_065 | 1/2/1280:1287, 1/2/1314:1317 | No text annotation Not in a motif group | ||
| IL_6P5I_066 | 1/2/1287:1290, 1/2/1309:1314 | No text annotation Not in a motif group | ||
| IL_6P5I_067 | 1/2/1290:1294, 1/2/1305:1309 | No text annotation Not in a motif group | ||
| IL_6P5I_068 | 1/2/1325:1327, 1/2/1502:1503 | Single bulged U Not in a motif group | homologous IL_4V88_449 IL_83039.11 | |
| IL_6P5I_069 | 1/2/1328:1333, 1/2/1498:1501 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_4V88_473 IL_85877.10 | |
| IL_6P5I_070 | 1/2/1333:1335, 1/2/1492:1498 | Minor groove platform with extra cWW Not in a motif group | geometric IL_4V88_451 IL_09768.1 | |
| IL_6P5I_071 | 1/2/1337:1338, 1/2/1488:1490 | Single bulged A Not in a motif group | homologous IL_4V88_452 IL_80007.16 | |
| IL_6P5I_072 | 1/2/1347:1349, 1/2/1380:1382 | Isolated cWH basepair Not in a motif group | homologous IL_4V88_453 IL_42589.6 | |
| IL_6P5I_073 | 1/2/1363:1365, 1/2/1374:1375 | Minor groove platform Not in a motif group | geometric IL_5ML7_009 IL_06437.11 | |
| IL_6P5I_074 | 1/2/1395:1399, 1/2/1447:1450 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_3WBM_003 IL_85877.10 | |
| IL_6P5I_075 | 1/2/1402:1405, 1/2/1441:1444 | Minor groove platform Not in a motif group | homologous IL_4V88_456 IL_69507.1 | |
| IL_6P5I_076 | 1/2/1412:1413, 1/2/1427:1429 | Single bulged G Not in a motif group | geometric IL_5J7L_019 IL_59137.10 | |
| IL_6P5I_077 | 1/2/1537:1539, 1/2/1594:1596 | No text annotation Not in a motif group | geometric IL_5VCI_002 IL_01312.13 | |
| IL_6P5I_078 | 1/2/1550:1558, 1/2/1577:1582 | No text annotation Not in a motif group | geometric IL_5J7L_055 IL_75461.2 | |
| IL_6P5I_079 | 1/2/1560:1562, 1/2/1573:1575 | No text annotation Not in a motif group | geometric IL_4WF9_018 IL_01312.13 | |
| IL_6P5I_080 | 1/2/1604:1610, 1/2/1629:1635 | No text annotation Not in a motif group | ||
| IL_6P5I_081 | 1/2/1700:1702, 1/2/1833:1836 | No text annotation Not in a motif group | geometric IL_4V88_463 IL_36143.2 | |
| IL_6P5I_082 | 1/2/1702:1705, 1/2/1829:1833 | No text annotation Not in a motif group | homologous IL_4V88_464 IL_59281.1 | |
| IL_6P5I_083 | 1/2/1706:1708, 1/2/1826:1828 | No text annotation Not in a motif group | homologous IL_4V88_465 IL_01312.13 | |
| IL_6P5I_084 | 1/2/1708:1711, 1/2/1822:1826 | No text annotation Not in a motif group | ||
| IL_6P5I_085 | 1/2/1714:1716, 1/2/1817:1819 | AA cWW Not in a motif group | homologous IL_4V88_467 IL_01312.13 | |
| IL_6P5I_086 | 1/2/1717:1720, 1/2/1813:1816 | Double sheared Not in a motif group | geometric IL_4V88_468 IL_09705.7 | |
| IL_6P5I_087 | 1/2/1720:1722, 1/2/1812:1813 | Single bulged U Not in a motif group | homologous IL_4V88_469 IL_21340.1 | |
| IL_6P5I_088 | 1/2/1729:1731, 1/2/1803:1805 | No text annotation Not in a motif group | homologous IL_4V88_470 IL_01312.13 | |
| IL_6P5I_089 | 1/2/1733:1736, 1/2/1798:1801 | Double sheared Not in a motif group | homologous IL_4V88_471 IL_09705.7 | |
| IL_6P5I_090 | 1/2/1739:1741, 1/2/1793:1795 | No text annotation Not in a motif group | geometric IL_5TBW_016 IL_01312.13 | |
| IL_6P5I_091 | 1/2/1742:1747, 1/2/1787:1792 | No text annotation Not in a motif group | geometric IL_5TBW_026 IL_19954.1 | |
| IL_6P5I_092 | 1/2/1750:1753, 1/2/1780:1784 | No text annotation Not in a motif group | ||
| IL_6P5I_093 | 1/2/1753:1756, 1/2/1776:1780 | No text annotation Not in a motif group | ||
| IL_6P5I_094 | 1/5/6:7, 1/8/149:151 | Single bulged C Not in a motif group | geometric IL_1DQF_001 IL_61258.10 | |
| IL_6P5I_095 | 1/5/12:14, 1/8/143:144 | Single bulged U Not in a motif group | homologous IL_5TBW_003 IL_83039.11 | |
| IL_6P5I_096 | 1/5/16:18, 1/8/139:141 | No text annotation Not in a motif group | geometric IL_1Y27_001 IL_01312.13 | |
| IL_6P5I_097 | 1/5/26:27, 1/5/55:57 | Single stack bend Not in a motif group | homologous IL_5TBW_004 IL_04038.4 | |
| IL_6P5I_098 | 1/5/30:37, 1/5/44:52 | 9x8 Sarcin-Ricin; G-bulge Not in a motif group | geometric IL_4WF9_008 IL_61812.1 | |
| IL_6P5I_099 | 1/5/81:88, 1/5/96:102 | No text annotation Not in a motif group | homologous IL_5TBW_006 IL_29509.1 | |
| IL_6P5I_100 | 1/5/118:121, 1/5/152:153 | Stack outside cWW Not in a motif group | geometric IL_5J7L_268 IL_37629.1 | |
| IL_6P5I_101 | 1/5/121:122, 1/5/147:152 | No text annotation Not in a motif group | geometric IL_4V9F_009 IL_19724.1 | |
| IL_6P5I_102 | 1/5/125:126, 1/5/142:144 | Single bulged C Not in a motif group | geometric IL_1S03_006 IL_61258.10 | |
| IL_6P5I_103 | 1/5/168:173, 1/5/263:267 | No text annotation Not in a motif group | ||
| IL_6P5I_104 | 1/5/178:182, 1/5/255:258 | No text annotation Not in a motif group | ||
| IL_6P5I_105 | 1/5/182:189, 1/5/252:255 | No text annotation Not in a motif group | ||
| IL_6P5I_106 | 1/5/195:196, 1/5/244:246 | Single bulged C Not in a motif group | geometric IL_1DQF_001 IL_61258.10 | |
| IL_6P5I_107 | 1/5/199:201, 1/5/214:215 | Single bulged U Not in a motif group | homologous IL_5TBW_012 IL_83039.11 | |
| IL_6P5I_108 | 1/5/339:342, 1/8/32:33 | Minor groove platform Not in a motif group | geometric IL_7RQB_073 IL_06437.11 | |
| IL_6P5I_109 | 1/5/348:350, 1/8/25:26 | Single bulged A Not in a motif group | homologous IL_5TBW_013 IL_80007.16 | |
| IL_6P5I_110 | 1/5/387:390, 1/5/401:414 | No text annotation Not in a motif group | homologous IL_5TBW_014 IL_60992.5 | |
| IL_6P5I_111 | 1/5/415:421, 1/8/13:19 | Triple sheared with non-canonical cWW Not in a motif group | homologous IL_5TBW_015 IL_66414.5 | |
| IL_6P5I_112 | 1/5/443:446, 1/5/1300:1304 | No text annotation Not in a motif group | ||
| IL_6P5I_113 | 1/5/448:450, 1/5/1297:1298 | No text annotation Not in a motif group | ||
| IL_6P5I_114 | 1/5/459:460, 1/5/695:697 | Single bulged C Not in a motif group | geometric IL_1S03_006 IL_61258.10 | |
| IL_6P5I_115 | 1/5/461:464, 1/5/691:694 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5J7L_283 IL_85877.10 | |
| IL_6P5I_116 | 1/5/466:472, 1/5/682:689 | No text annotation Not in a motif group | ||
| IL_6P5I_117 | 1/5/480:485, 1/5/671:674 | No text annotation Not in a motif group | ||
| IL_6P5I_118 | 1/5/487:488, 1/5/665:669 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1NBS_009 IL_13730.12 | |
| IL_6P5I_119 | 1/5/490:493, 1/5/661:663 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_3TD0_005 IL_01312.13 | |
| IL_6P5I_120 | 1/5/497:504, 1/5/654:657 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1D4R_001 IL_85877.10 | |
| IL_6P5I_121 | 1/5/508:510, 1/5/649:650 | Single bulged A Not in a motif group | geometric IL_6WPI_001 IL_80007.16 | |
| IL_6P5I_122 | 1/5/519:521, 1/5/641:642 | Single stack bend Not in a motif group | geometric IL_4C7O_002 IL_72766.2 | |
| IL_6P5I_123 | 1/5/709:710, 1/5/1286:1288 | Single bulged G Not in a motif group | geometric IL_4LFB_036 IL_59137.10 | |
| IL_6P5I_124 | 1/5/723:724, 1/5/942:945 | Multiple bulged bases Not in a motif group | geometric IL_7V9E_001 IL_13730.12 | |
| IL_6P5I_125 | 1/5/727:731, 1/5/938:939 | Single stack bend Not in a motif group | geometric IL_2QWY_008 IL_04038.4 | |
| IL_6P5I_126 | 1/5/732:735, 1/5/927:937 | No text annotation Not in a motif group | ||
| IL_6P5I_127 | 1/5/737:743, 1/5/920:925 | No text annotation Not in a motif group | ||
| IL_6P5I_128 | 1/5/745:752, 1/5/910:918 | No text annotation Not in a motif group | geometric IL_5TBW_020 IL_94501.1 | |
| IL_6P5I_129 | 1/5/1074:1076, 1/5/1234:1236 | No text annotation Not in a motif group | geometric IL_3D0U_006 IL_01312.13 | |
| IL_6P5I_130 | 1/5/1077:1080, 1/5/1219:1233 | No text annotation Not in a motif group | ||
| IL_6P5I_131 | 1/5/1082:1084, 1/5/1213:1217 | Isolated cWS basepair Not in a motif group | geometric IL_4TS2_003 IL_67621.5 | |
| IL_6P5I_132 | 1/5/1086:1087, 1/5/1209:1211 | Single bulged C Not in a motif group | geometric IL_3W3S_001 IL_61258.10 | |
| IL_6P5I_133 | 1/5/1096:1098, 1/5/1197:1200 | No text annotation Not in a motif group | ||
| IL_6P5I_134 | 1/5/1098:1169, 1/5/1192:1197 | No text annotation Not in a motif group | ||
| IL_6P5I_135 | 1/5/1172:1175, 1/5/1186:1189 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_1MFQ_004 IL_85877.10 | |
| IL_6P5I_136 | 1/5/1357:1360, 1/5/1379:1382 | No text annotation Not in a motif group | ||
| IL_6P5I_137 | 1/5/1360:1361, 1/5/1376:1379 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | geometric IL_1U9S_003 IL_13730.12 | |
| IL_6P5I_138 | 1/5/1425:1429, 1/5/1455:1460 | Triple sheared related Not in a motif group | geometric IL_4V9F_018 IL_64879.1 | |
| IL_6P5I_139 | 1/5/1431:1434, 1/5/1450:1453 | Double sheared Not in a motif group | geometric IL_4KZD_002 IL_09705.7 | |
| IL_6P5I_140 | 1/5/1467:1468, 1/5/1496:1498 | Single bulged A Not in a motif group | homologous IL_5TBW_024 IL_80007.16 | |
| IL_6P5I_141 | 1/5/1474:1476, 1/5/1489:1490 | Single base bend Not in a motif group | geometric IL_5IBB_340 IL_83121.7 | |
| IL_6P5I_142 | 1/5/1520:1522, 1/5/1655:1657 | No text annotation Not in a motif group | homologous IL_5TBW_027 IL_01312.13 | |
| IL_6P5I_143 | 1/5/1522:1526, 1/5/1648:1655 | No text annotation Not in a motif group | geometric IL_5TBW_028 IL_17470.5 | |
| IL_6P5I_144 | 1/5/1550:1551, 1/5/1576:1578 | Single bulged G Not in a motif group | homologous IL_5TBW_029 IL_99645.1 | |
| IL_6P5I_145 | 1/5/1551:1555, 1/5/1572:1576 | Triple sheared Not in a motif group | geometric IL_4V9F_027 IL_56467.6 | |
| IL_6P5I_146 | 1/5/1586:1589, 1/5/1605:1607 | Major groove platform with extra cWW Not in a motif group | homologous IL_5TBW_031 IL_95485.6 | |
| IL_6P5I_147 | 1/5/1590:1592, 1/5/1603:1604 | Single bulged U Not in a motif group | homologous IL_5TBW_032 IL_83039.11 | |
| IL_6P5I_148 | 1/5/1624:1626, 1/5/1636:1640 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_033 IL_90991.5 | |
| IL_6P5I_149 | 1/5/1671:1673, 1/5/1682:1684 | No text annotation Not in a motif group | homologous IL_5TBW_034 IL_01312.13 | |
| IL_6P5I_150 | 1/5/1686:1688, 1/5/1848:1851 | No text annotation Not in a motif group | ||
| IL_6P5I_151 | 1/5/1694:1721, 1/5/1841:1842 | No text annotation Not in a motif group | ||
| IL_6P5I_152 | 1/5/1723:1725, 1/5/1838:1839 | Single bulged G Not in a motif group | homologous IL_5TBW_037 IL_59137.10 | |
| IL_6P5I_153 | 1/5/1732:1737, 1/5/1792:1797 | 5x5 Sarcin-Ricin with intercalated A; G-bulge Not in a motif group | geometric IL_7A0S_027 IL_89193.1 | |
| IL_6P5I_154 | 1/5/1737:1738, 1/5/1790:1792 | Minor groove platform Not in a motif group | geometric IL_5TBW_039 IL_06437.11 | |
| IL_6P5I_155 | 1/5/1739:1744, 1/5/1786:1789 | C-loop Not in a motif group | homologous IL_5TBW_040 IL_63596.4 | |
| IL_6P5I_156 | 1/5/1746:1749, 1/5/1781:1784 | Tandem non-canonical cWW pairs Not in a motif group | geometric IL_5TBW_041 IL_85877.10 | |
| IL_6P5I_157 | 1/5/1749:1751, 1/5/1779:1781 | No text annotation Not in a motif group | homologous IL_5TBW_042 IL_01312.13 | |
| IL_6P5I_158 | 1/5/1753:1757, 1/5/1775:1777 | No text annotation Not in a motif group | ||
| IL_6P5I_159 | 1/5/1814:1816, 1/5/1823:1824 | Single bulged A Not in a motif group | homologous IL_5TBW_045 IL_80007.16 | |
| IL_6P5I_160 | 1/5/1858:1860, 1/5/1874:1876 | No text annotation Not in a motif group | homologous IL_5TBW_046 IL_01312.13 | |
| IL_6P5I_161 | 1/5/1861:1863, 1/5/1871:1873 | Isolated cWS basepair Not in a motif group | homologous IL_5TBW_047 IL_67621.5 | |
| IL_6P5I_162 | 1/5/1905:1909, 1/5/2067:2071 | UAA/GAN Not in a motif group | homologous IL_5TBW_048 IL_53523.5 | |
| IL_6P5I_163 | 1/5/1911:1918, 1/5/2064:2065 | SSU/LSU pseudoknot Not in a motif group | homologous IL_5TBW_049 IL_15861.6 | |
| IL_6P5I_164 | 1/5/1918:1920, 1/5/2063:2064 | No text annotation Not in a motif group | ||
| IL_6P5I_165 | 1/5/1920:1922, 1/5/2062:2063 | No text annotation Not in a motif group | ||
| IL_6P5I_166 | 1/5/1926:1933, 1/5/2053:2058 | No text annotation Not in a motif group | homologous IL_5TBW_051 IL_17971.1 | |
| IL_6P5I_167 | 1/5/1933:1944, 1/5/2038:2053 | No text annotation Not in a motif group | geometric IL_5TBW_052 IL_94878.1 | |
| IL_6P5I_168 | 1/5/1946:1948, 1/5/2035:2036 | Single bulged U Not in a motif group | homologous IL_5TBW_053 IL_83039.11 | |
| IL_6P5I_169 | 1/5/1957:1965, 1/5/2022:2026 | Kink-turn Not in a motif group | homologous IL_5TBW_054 IL_90538.3 | |
| IL_6P5I_170 | 1/5/2001:2005, 1/5/2014:2016 | Major groove platform with extra cWW Not in a motif group | geometric IL_5TBW_056 IL_95485.6 | |
| IL_6P5I_171 | 1/5/2083:2085, 1/5/2272:2273 | Single bulged U Not in a motif group | geometric IL_4LFB_046 IL_83039.11 | |
| IL_6P5I_172 | 1/5/2290:2292, 1/5/2342:2345 | Isolated cWS basepair Not in a motif group | homologous IL_5TBW_057 IL_01312.13 | |
| IL_6P5I_173 | 1/5/2299:2301, 1/5/2334:2335 | Single bulged A Not in a motif group | homologous IL_5TBW_058 IL_80007.16 | |
| IL_6P5I_174 | 1/5/2302:2309, 1/5/2329:2333 | Kink-turn Not in a motif group | homologous IL_5TBW_059 IL_29549.9 | |
| IL_6P5I_175 | 1/5/2312:2314, 1/5/2325:2326 | Single bulged A Not in a motif group | geometric IL_7RQB_033 IL_80007.16 | |
| IL_6P5I_176 | 1/5/2358:2364, 1/5/3858:3863 | 7x6 Sarcin-Ricin; G-bulge Not in a motif group | homologous IL_5TBW_061 IL_35110.5 | |
| IL_6P5I_177 | 1/5/2415:2419, 1/5/2427:2429 | C-loop Not in a motif group | geometric IL_7A0S_047 IL_63596.4 | |
| IL_6P5I_178 | 1/5/2446:2450, 1/5/2509:2514 | UAA/GAN Not in a motif group | homologous IL_5TBW_063 IL_53523.5 | |
| IL_6P5I_179 | 1/5/2476:2480, 1/5/2498:2501 | No text annotation Not in a motif group | ||
| IL_6P5I_180 | 1/5/2542:2547, 1/5/2772:2774 | Isolated non-canonical cWW with bulges Not in a motif group | geometric IL_1U6B_001 IL_01312.13 | |
| IL_6P5I_181 | 1/5/2549:2550, 1/5/2768:2770 | Single bulged U Not in a motif group | geometric IL_2A64_002 IL_83039.11 | |
| IL_6P5I_182 | 1/5/2589:2593, 1/5/2752:2756 | Triple sheared Not in a motif group | homologous IL_5TBW_067 IL_56467.6 | |
| IL_6P5I_183 | 1/5/2613:2614, 1/5/2724:2726 | Single bulged C Not in a motif group | homologous IL_5TBW_069 IL_61258.10 | |
| IL_6P5I_184 | 1/5/2614:2615, 1/5/2722:2724 | Single stack bend Not in a motif group | geometric IL_5TBW_070 IL_72766.2 | |
| IL_6P5I_185 | 1/5/2646:2648, 1/5/2685:2688 | Isolated tHS basepair with bulges Not in a motif group | geometric IL_4V9F_076 IL_38958.6 | |
| IL_6P5I_186 | 1/5/2651:2653, 1/5/2681:2682 | Single bulged G Not in a motif group | geometric IL_3NDB_004 IL_59137.10 | |
| IL_6P5I_187 | 1/5/2656:2662, 1/5/2672:2678 | Kink-turn Not in a motif group | homologous IL_5TBW_073 IL_76900.1 | |
| IL_6P5I_188 | 1/5/2704:2705, 1/5/2710:2712 | No text annotation Not in a motif group | ||
| IL_6P5I_189 | 1/5/2832:2838, 1/5/3850:3853 | No text annotation Not in a motif group | homologous IL_5TBW_074 IL_79393.8 | |
| IL_6P5I_190 | 1/5/2844:2846, 1/5/3842:3844 | Isolated tWW turn Not in a motif group | homologous IL_5TBW_075 IL_54997.5 | |
| IL_6P5I_191 | 1/5/2847:2850, 1/5/3840:3841 | Major groove platform; stack outside cWW Not in a motif group | homologous IL_5TBW_076 IL_80663.10 | |
| IL_6P5I_192 | 1/5/2850:2855, 1/5/3837:3840 | Intercalated tWH Not in a motif group | geometric IL_5TBW_077 IL_98882.3 | |
| IL_6P5I_193 | 1/5/2867:2872, 1/5/2877:2883 | tSH-tSH-tHH-tHS Not in a motif group | homologous IL_5TBW_078 IL_66584.5 | |
| IL_6P5I_194 | 1/5/2889:2891, 1/5/3610:3612 | No text annotation Not in a motif group | homologous IL_5TBW_079 IL_01312.13 | |
| IL_6P5I_195 | 1/5/2896:2897, 1/5/3602:3605 | No text annotation Not in a motif group | homologous IL_5TBW_080 IL_76195.1 | |
| IL_6P5I_196 | 1/5/3632:3633, 1/5/3827:3829 | Single bulged A Not in a motif group | homologous IL_5TBW_082 IL_80007.16 | |
| IL_6P5I_197 | 1/5/3660:3665, 1/5/3677:3684 | Kink-turn related Not in a motif group | homologous IL_5TBW_083 IL_95993.1 | |
| IL_6P5I_198 | 1/5/3700:3703, 1/5/3749:3750 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5TBW_084 IL_72766.2 | |
| IL_6P5I_199 | 1/5/3704:3705, 1/5/3745:3748 | Major groove outside cWW, minor groove, intercalation pocket Not in a motif group | homologous IL_5TBW_085 IL_13730.12 | |
| IL_6P5I_200 | 1/5/3708:3710, 1/5/3741:3742 | Single stack bend Not in a motif group | geometric IL_7A0S_054 IL_04038.4 | |
| IL_6P5I_201 | 1/5/3710:3714, 1/5/3739:3741 | No text annotation Not in a motif group | ||
| IL_6P5I_202 | 1/5/3715:3721, 1/5/3732:3738 | No text annotation Not in a motif group | homologous IL_5TBW_088 IL_36973.5 | |
| IL_6P5I_203 | 1/5/3780:3781, 1/5/3811:3814 | Multiple bulged bases Not in a motif group | homologous IL_5TBW_089 IL_69632.1 | |
| IL_6P5I_204 | 1/5/3781:3792, 1/5/3808:3811 | No text annotation Not in a motif group | geometric IL_5TBW_090 IL_45481.1 | |
| IL_6P5I_205 | 1/5/3895:3898, 1/5/4563:4565 | Major groove platform with extra pair Not in a motif group | homologous IL_5TBW_091 IL_87630.5 | |
| IL_6P5I_206 | 1/5/3900:3902, 1/5/4558:4561 | Minor groove platform with intercalation Not in a motif group | homologous IL_5TBW_092 IL_86964.1 | |
| IL_6P5I_207 | 1/5/3913:3915, 1/5/4388:4389 | Single bulged U Not in a motif group | homologous IL_5TBW_093 IL_83039.11 | |
| IL_6P5I_208 | 1/5/3916:3917, 1/5/4384:4387 | Minor groove platform Not in a motif group | homologous IL_5TBW_094 IL_06437.11 | |