6YPU Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation | motif |
|---|---|---|---|---|
| 1 | ➜ | 1/2/14:24 | NA | NA |
| 2 | ➜ | 1/2/154:159 | NA | NA |
| 3 | ➜ | 1/2/182:187 | NA | NA |
| 4 | ➜ | 1/2/254:264 | NA | NA |
| 5 | ➜ | 1/2/292:297 | NA | NA |
| 6 | ➜ | 1/2/316:329 | NA | NA |
| 7 | ➜ | 1/2/338:343 | NA | NA |
| 8 | ➜ | 1/2/375:380 | NA | NA |
| 9 | ➜ | 1/2/415:420 | NA | NA |
| 10 | ➜ | 1/2/458:466 | NA | NA |
| 11 | ➜ | 1/2/519:524 | NA | NA |
| 12 | ➜ | 1/2/614:620 | NA | NA |
| 13 | ➜ | 1/2/686:695 | NA | NA |
| 14 | ➜ | 1/2/723:728 | NA | NA |
| 15 | ➜ | 1/2/783:793 | NA | NA |
| 16 | ➜ | 1/2/859:864 | NA | NA |
| 17 | ➜ | 1/2/894:899 | NA | NA |
| 18 | ➜ | 1/4/1446:1451 | NA | NA |
| 19 | ➜ | 1/4/1512:1517 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation | motif |
|---|---|---|---|---|
| 1 | ➜ | 1/2/32:34,1/2/549:550 | NA | NA |
| 2 | ➜ | 1/2/46:47,1/2/392:394 | NA | NA |
| 3 | ➜ | 1/2/49:54,1/2/355:357 | NA | NA |
| 4 | ➜ | 1/2/56:58,1/2/352:353 | NA | NA |
| 5 | ➜ | 1/2/65:68,1/2/99:100 | NA | NA |
| 6 | ➜ | 1/2/69:71,1/2/96:98 | NA | NA |
| 7 | ➜ | 1/2/73:77,1/2/90:94 | NA | NA |
| 8 | ➜ | 1/2/120:122,1/2/231:233 | NA | NA |
| 9 | ➜ | 1/2/124:127,1/2/227:229 | NA | NA |
| 10 | ➜ | 1/2/128:132,1/2/223:226 | NA | NA |
| 11 | ➜ | 1/2/140:143,1/2/171:174 | NA | NA |
| 12 | ➜ | 1/2/143:149,1/2/164:171 | NA | NA |
| 13 | ➜ | 1/2/238:243,1/2/273:280 | NA | NA |
| 14 | ➜ | 1/2/245:249,1/2/269:271 | NA | NA |
| 15 | ➜ | 1/2/288:289,1/2/300:304 | NA | NA |
| 16 | ➜ | 1/2/363:365,1/2/388:389 | NA | NA |
| 17 | ➜ | 1/2/367:371,1/2/385:386 | NA | NA |
| 18 | ➜ | 1/2/371:372,1/2/383:385 | NA | NA |
| 19 | ➜ | 1/2/405:412,1/2/423:429 | NA | NA |
| 20 | ➜ | 1/2/436:438,1/2/489:494 | NA | NA |
| 21 | ➜ | 1/2/442:446,1/2/480:485 | NA | NA |
| 22 | ➜ | 1/2/446:449,1/2/476:480 | NA | NA |
| 23 | ➜ | 1/2/452:453,1/2/471:473 | NA | NA |
| 24 | ➜ | 1/2/501:508,1/2/537:538 | NA | NA |
| 25 | ➜ | 1/2/512:518,1/2/525:533 | NA | NA |
| 26 | ➜ | 1/2/577:581,1/2/754:758 | NA | NA |
| 27 | ➜ | 1/2/591:593,1/2/641:642 | NA | NA |
| 28 | ➜ | 1/2/594:595,1/2/637:640 | NA | NA |
| 29 | ➜ | 1/2/602:609,1/2/625:630 | NA | NA |
| 30 | ➜ | 1/2/656:657,1/2/742:744 | NA | NA |
| 31 | ➜ | 1/2/659:663,1/2/737:740 | NA | NA |
| 32 | ➜ | 1/2/670:675,1/2/709:714 | NA | NA |
| 33 | ➜ | 1/2/681:685,1/2/696:703 | NA | NA |
| 34 | ➜ | 1/2/771:775,1/2/801:802 | NA | NA |
| 35 | ➜ | 1/2/776:780,1/2/796:800 | NA | NA |
| 36 | ➜ | 1/2/884:891,1/2/902:907 | NA | NA |
| 37 | ➜ | 1/2/919:920,1/4/1390:1392 | NA | NA |
| 38 | ➜ | 1/4/1396:1398,1/4/1498:1501 | NA | NA |
| 39 | ➜ | 1/4/1398:1401,1/4/1494:1498 | NA | NA |
| 40 | ➜ | 1/4/1402:1404,1/4/1491:1493 | NA | NA |
| 41 | ➜ | 1/4/1404:1406,1/4/1488:1491 | NA | NA |
| 42 | ➜ | 1/4/1409:1411,1/4/1483:1485 | NA | NA |
| 43 | ➜ | 1/4/1413:1416,1/4/1478:1481 | NA | NA |
| 44 | ➜ | 1/4/1418:1420,1/4/1474:1476 | NA | NA |
| 45 | ➜ | 1/4/1427:1432,1/4/1463:1467 | NA | NA |
| 46 | ➜ | 1/4/1437:1439,1/4/1457:1458 | NA | NA |
| 47 | ➜ | 1/4/1442:1445,1/4/1452:1454 | NA | NA |
Problematic loops
No problematic loops
Coloring options: