6ZVI Summary
- Structure Title
- 6zvi Summary
- Authors
- Release Date
- 2020-09-09
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.0 Å
- Chains
-
- 4 RNA chains from Saccharomyces cerevisiae
- 34 other chains
- Compounds
- 40S ribosomal protein S18-A, 40S ribosomal protein S19-A, RPS20 isoform 1, 40S ribosomal protein S21-A, RPS22A isoform 1, 40S ribosomal protein S23-A, 40S ribosomal protein S24-A, RPS25A isoform 1, RPS26B isoform 1, 40S ribosomal protein S27-A, RPS28A isoform 1, RPS29A isoform 1, 40S ribosomal protein S30-A, RPS31 isoform 1, Guanine nucleotide-binding protein subunit beta-like protein, MBF1 isoform 1, A/P-site tRNA, P/E-site tRNA, mRNA, 18S rRNA, 40S ribosomal protein S0-A, RPS1A isoform 1, RPS2 isoform 1, RPS3 isoform 1, 40S ribosomal protein S4-A, Rps5p, 40S ribosomal protein S6-A, 40S ribosomal protein S7-A, 40S ribosomal protein S8-A, 40S ribosomal protein S9-A, 40S ribosomal protein S10-A, 40S ribosomal protein S11-A, RPS12 isoform 1, 40S ribosomal protein S13, 40S ribosomal protein S14-B, RPS15 isoform 1, 40S ribosomal protein S16-A, 40S ribosomal protein S17-A
Pairwise Interactions
Interactions annotated by FR3D:- 681 base-pairs
- 1,809 base-stacking
- 757 base-phosphate
- 97 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6zvi contains:- 87 internal loops from 0 motif groups
- 42 hairpin loops from 0 motif groups
- 12 three-way junctions
3D Redundancy
6zvi has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_11689.4 (1)
- NR_20.0_38961.4 (1)
- NR_20.0_03510.52 (1)
- NR_3.0_11689.4 (1)
- NR_3.0_38961.4 (1)
- NR_3.0_03510.52 (1)
- NR_3.5_11689.4 (1)
- NR_3.5_38961.4 (1)
- NR_3.5_03510.52 (1)
- NR_4.0_11689.4 (1)
- NR_4.0_38961.4 (1)
- NR_4.0_03510.52 (1)
- NR_all_11689.4 (1)
- NR_all_38961.4 (1)
- NR_all_03510.52 (1)