7TOR Summary
- Structure Title
- 7TOR Summary
- Authors
- Loveland, A.B., Svidritskiy, E., Susorov, D., Lee, S., Park, A., Zvornicanin, S., Demo, G., Gao, F.B., Korostelev, A.A.
- Release Date
- 2022-05-25
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
- Chains
-
- 7 RNA chains from Oryctolagus cuniculus, Escherichia coli K-12, Saccharomyces cerevisiae
- 79 other chains
- Compounds
- 18S rRNA, 28S rRNA, 5.8S rRNA, 5S rRNA, 60S ribosomal protein L8, 60S ribosomal protein L3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, 60S ribosomal protein L7, eL8, 60S ribosomal protein L9, Ribosomal protein L10, 60S ribosomal protein L11, uL11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, uL13, 60S ribosomal protein L17, eL18, 60S ribosomal protein L19, eL20, 60S ribosomal protein L21, eL22, 60S ribosomal protein L23, Ribosomal protein L24, uL23, 60S ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L27a, eL29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, 60S ribosomal protein L37, eL38, 60S ribosomal protein L39, eL40, eL41, eL42, 60S ribosomal protein L37a, 60S ribosomal protein L28, 60S acidic ribosomal protein P0, Receptor of activated protein C kinase 1, 40S_SA_C domain-containing protein, 40S ribosomal protein S3a, 40S ribosomal protein S2, 40S ribosomal protein S3, 40S ribosomal protein S4, Ribosomal protein S5, 40S ribosomal protein S6, eS7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, uS11, 40S ribosomal protein S15, uS9, 40S ribosomal protein S17, 40S ribosomal protein S18, eS19, 40S ribosomal protein S20, eS21, 40S ribosomal protein S15a, 40S ribosomal protein S23, 40S ribosomal protein S24, 40S ribosomal protein S25, eS26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, 40S ribosomal protein S30, 40S ribosomal protein S27a, tRNAfMet bound to E-site, GR20, ALS/FTD dipeptide repeat protein, GR20, ALS/FTD dipeptide repeat protein, mRNA, tRNAfMet bound to E-site
Pairwise Interactions
Interactions annotated by FR3D:- 2,135 base-pairs
- 5,645 base-stacking
- 2,273 base-phosphate
- 271 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 7TOR contains:- 260 internal loops from 0 motif groups
- 120 hairpin loops from 0 motif groups
- 29 three-way junctions
3D Redundancy
7TOR has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_35542.121 (2)
- NR_20.0_06650.33 (1)
- NR_20.0_21280.29 (1)
- NR_20.0_10255.33 (1)
- NR_3.0_35542.121 (2)
- NR_3.0_06650.33 (1)
- NR_3.0_21280.29 (1)
- NR_3.0_10255.33 (1)
- NR_3.5_35542.121 (2)
- NR_3.5_06650.33 (1)
- NR_3.5_21280.29 (1)
- NR_3.5_10255.33 (1)
- NR_4.0_35542.121 (2)
- NR_4.0_06650.33 (1)
- NR_4.0_21280.29 (1)
- NR_4.0_10255.33 (1)
- NR_all_35542.121 (2)
- NR_all_06650.33 (1)
- NR_all_21280.29 (1)
- NR_all_10255.33 (1)
Similar structures
4KZY 6R6G 5LZU 6HCF 7SYV 6R7Q 3JAH 5LZY 7SYN 7SYP 7SYQ 6HCJ 6MTB 5LZW 5LZX 6GZ3 7SYX 7SYW 7NWG 6GZ4 5LZT 6YAM 7NWH 5FLX 3JAG 5K0Y 6HCQ 6HCM 4UJE 3JAN 3JAJ 4UJD 4D61 4D5L 7SYJ 7SYM 3JAI 7SYG 7SYK 7SYT 7SYI 7SYL 7SYU 7SYH 7SYO 4UJC 5LZZ 4KZZ 7NWI 6YAL 8BHF 6R5Q 7TOQ 7ZJX 7O81 6ZVK 6P5I 8P2K 7O80 4KZX 7O7Y 7OYD 7O7Z 7JQB 7ZJW 7UCK 6SGC 6P5K 6P5J 7UCJ 5LZV 6D90 7SYS 8BTK 6YAN 6MTC 6MTE 6W2S 6GZ5 6MTD 7A01 6P4G 7MDZ 6R6P 6P4H 6P5N 6D9J 7JQC 5LZS 6W2T 7SYRStructures from NR_all_21280.29