8AGT Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/f/38:45 | NA | NA | ||
| 1/f/69:74 | NA | NA | ||
| 1/f/90:96 | NA | NA | ||
| 1/f/132:136 | NA | NA | ||
| 1/f/194:201 | NA | NA | ||
| 1/f/208:212 | NA | NA | ||
| 1/f/216:224 | NA | NA | ||
| 1/f/278:287 | NA | NA | ||
| 1/f/303:312 | NA | NA | ||
| 1/f/357:362 | NA | NA | ||
| 1/f/382:387 | NA | NA | ||
| 1/f/543:548 | NA | NA | ||
| 1/f/599:604 | NA | NA | ||
| 1/f/640:649 | NA | NA | ||
| 1/f/686:694 | NA | NA | ||
| 1/f/707:712 | NA | NA | ||
| 1/f/732:737 | NA | NA | ||
| 1/f/763:768 | NA | NA | ||
| 1/f/844:849 | NA | NA | ||
| 1/f/876:885 | NA | NA | ||
| 1/f/910:918 | NA | NA | ||
| 1/f/958:963 | NA | NA | ||
| 1/f/1023:1029 | NA | NA | ||
| 1/f/1076:1083 | NA | NA | ||
| 1/f/1126:1132 | NA | NA | ||
| 1/f/1148:1155 | NA | NA | ||
| 1/f/1239:1249 | NA | NA | ||
| 1/f/1267:1274 | NA | NA | ||
| 1/f/1347:1357 | NA | NA | ||
| 1/f/1403:1408 | NA | NA | ||
| 1/f/1462:1470 | NA | NA | ||
| 1/f/1506:1512 | NA | NA | ||
| 1/f/1544:1549 | NA | NA | ||
| 1/f/1563:1576 | NA | NA | ||
| 1/f/1599:1608 | NA | NA | ||
| 1/f/1634:1639 | NA | NA | ||
| 1/f/1680:1688 | NA | NA | ||
| 1/f/1719:1725 | NA | NA | ||
| 1/f/1759:1766 | NA | NA | ||
| 1/f/1792:1796 | NA | NA | ||
| 1/f/1844:1851 | NA | NA | ||
| 1/f/1862:1868 | NA | NA | ||
| 1/f/1923:1928 | NA | NA | ||
| 1/f/1952:2094 | NA | NA | ||
| 1/f/2110:2114 | NA | NA | ||
| 1/f/2135:2145 | NA | NA | ||
| 1/f/2164:2170 | NA | NA | ||
| 1/f/2220:2225 | NA | NA | ||
| 1/f/2253:2263 | NA | NA | ||
| 1/f/2292:2300 | NA | NA | ||
| 1/f/2369:2378 | NA | NA | ||
| 1/f/2470:2475 | NA | NA | ||
| 1/f/2535:2544 | NA | NA | ||
| 1/f/2568:2573 | NA | NA | ||
| 1/f/2616:2624 | NA | NA | ||
| 1/f/2633:2645 | NA | NA | ||
| 1/f/2673:2681 | NA | NA | ||
| 1/f/2693:2700 | NA | NA | ||
| 1/f/2724:2732 | NA | NA | ||
| 1/f/2744:2749 | NA | NA | ||
| 1/f/2776:2784 | NA | NA | ||
| 1/f/2840:2848 | NA | NA | ||
| 1/f/2897:2904 | NA | NA | ||
| 1/f/2920:2926 | NA | NA | ||
| 1/f/2963:2968 | NA | NA | ||
| 1/f/3025:3030 | NA | NA | ||
| 1/f/3068:3073 | NA | NA | ||
| 1/f/3110:3124 | NA | NA | ||
| 1/f/3194:3197 | NA | NA | ||
| 1/f/3240:3247 | NA | NA | ||
| 1/f/3303:3311 | NA | NA | ||
| 1/f/3350:3353 | NA | NA | ||
| 1/h/36:41 | NA | NA | ||
| 1/h/88:93 | NA | NA | ||
| 1/i/69:89 | NA | NA | ||
| 1/i/108:114 | NA | NA | ||
| 1/i/124:129 | NA | NA | ||
| 1/x/13:22 | NA | NA | ||
| 1/x/31:39 | NA | NA | ||
| 1/x/53:61 | NA | NA | ||
| 1/y/13:22 | NA | NA | ||
| 1/y/31:39 | NA | NA | ||
| 1/y/53:61 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/f/3:4, 1/i/155:156 | NA | NA | ||
| 1/f/7:8, 1/i/150:152 | NA | NA | ||
| 1/f/13:15, 1/i/144:145 | NA | NA | ||
| 1/f/27:28, 1/f/56:58 | NA | NA | ||
| 1/f/31:38, 1/f/45:53 | NA | NA | ||
| 1/f/82:89, 1/f/97:103 | NA | NA | ||
| 1/f/123:124, 1/f/144:149 | NA | NA | ||
| 1/f/125:127, 1/f/141:143 | NA | NA | ||
| 1/f/163:165, 1/f/257:258 | NA | NA | ||
| 1/f/169:170, 1/f/248:253 | NA | NA | ||
| 1/f/177:178, 1/f/238:241 | NA | NA | ||
| 1/f/189:191, 1/f/204:205 | NA | NA | ||
| 1/f/337:339, 1/i/25:26 | NA | NA | ||
| 1/f/376:379, 1/f/390:403 | NA | NA | ||
| 1/f/404:410, 1/i/13:19 | NA | NA | ||
| 1/f/429:431, 1/f/628:630 | NA | NA | ||
| 1/f/435:495, 1/f/618:624 | NA | NA | ||
| 1/f/512:513, 1/f/577:579 | NA | NA | ||
| 1/f/517:525, 1/f/567:573 | NA | NA | ||
| 1/f/531:538, 1/f/553:561 | NA | NA | ||
| 1/f/668:670, 1/f/792:794 | NA | NA | ||
| 1/f/680:684, 1/f/696:700 | NA | NA | ||
| 1/f/725:728, 1/f/741:745 | NA | NA | ||
| 1/f/752:753, 1/f/779:781 | NA | NA | ||
| 1/f/755:756, 1/f/775:777 | NA | NA | ||
| 1/f/758:763, 1/f/768:773 | NA | NA | ||
| 1/f/803:805, 1/f/938:940 | NA | NA | ||
| 1/f/805:809, 1/f/931:938 | NA | NA | ||
| 1/f/833:834, 1/f/859:861 | NA | NA | ||
| 1/f/834:838, 1/f/855:859 | NA | NA | ||
| 1/f/869:872, 1/f/888:890 | NA | NA | ||
| 1/f/873:875, 1/f/886:887 | NA | NA | ||
| 1/f/907:909, 1/f/919:923 | NA | NA | ||
| 1/f/954:956, 1/f/965:967 | NA | NA | ||
| 1/f/969:970, 1/f/1111:1113 | NA | NA | ||
| 1/f/977:982, 1/f/1101:1104 | NA | NA | ||
| 1/f/983:985, 1/f/1099:1100 | NA | NA | ||
| 1/f/991:997, 1/f/1052:1058 | NA | NA | ||
| 1/f/997:998, 1/f/1050:1052 | NA | NA | ||
| 1/f/999:1004, 1/f/1046:1049 | NA | NA | ||
| 1/f/1006:1009, 1/f/1041:1044 | NA | NA | ||
| 1/f/1009:1011, 1/f/1039:1041 | NA | NA | ||
| 1/f/1014:1018, 1/f/1034:1036 | NA | NA | ||
| 1/f/1069:1071, 1/f/1087:1089 | NA | NA | ||
| 1/f/1074:1076, 1/f/1083:1084 | NA | NA | ||
| 1/f/1120:1122, 1/f/1136:1138 | NA | NA | ||
| 1/f/1123:1125, 1/f/1133:1135 | NA | NA | ||
| 1/f/1167:1171, 1/f/1328:1332 | NA | NA | ||
| 1/f/1173:1180, 1/f/1325:1326 | NA | NA | ||
| 1/f/1180:1182, 1/f/1324:1325 | NA | NA | ||
| 1/f/1187:1194, 1/f/1314:1319 | NA | NA | ||
| 1/f/1194:1205, 1/f/1299:1314 | NA | NA | ||
| 1/f/1207:1209, 1/f/1296:1297 | NA | NA | ||
| 1/f/1218:1226, 1/f/1283:1287 | NA | NA | ||
| 1/f/1234:1238, 1/f/1250:1254 | NA | NA | ||
| 1/f/1262:1266, 1/f/1275:1277 | NA | NA | ||
| 1/f/1376:1378, 1/f/1428:1431 | NA | NA | ||
| 1/f/1385:1387, 1/f/1420:1421 | NA | NA | ||
| 1/f/1388:1395, 1/f/1415:1419 | NA | NA | ||
| 1/f/1398:1400, 1/f/1411:1412 | NA | NA | ||
| 1/f/1444:1450, 1/f/2354:2359 | NA | NA | ||
| 1/f/1500:1505, 1/f/1513:1516 | NA | NA | ||
| 1/f/1532:1536, 1/f/1585:1590 | NA | NA | ||
| 1/f/1618:1621, 1/f/1824:1826 | NA | NA | ||
| 1/f/1623:1626, 1/f/1817:1822 | NA | NA | ||
| 1/f/1627:1631, 1/f/1811:1816 | NA | NA | ||
| 1/f/1645:1649, 1/f/1806:1810 | NA | NA | ||
| 1/f/1661:1663, 1/f/1786:1788 | NA | NA | ||
| 1/f/1669:1670, 1/f/1778:1780 | NA | NA | ||
| 1/f/1670:1671, 1/f/1776:1778 | NA | NA | ||
| 1/f/1694:1698, 1/f/1747:1752 | NA | NA | ||
| 1/f/1702:1707, 1/f/1737:1743 | NA | NA | ||
| 1/f/1711:1717, 1/f/1727:1733 | NA | NA | ||
| 1/f/1883:1889, 1/f/2346:2349 | NA | NA | ||
| 1/f/1895:1897, 1/f/2338:2340 | NA | NA | ||
| 1/f/1898:1901, 1/f/2336:2337 | NA | NA | ||
| 1/f/1901:1906, 1/f/2333:2336 | NA | NA | ||
| 1/f/1918:1923, 1/f/1928:1934 | NA | NA | ||
| 1/f/1940:1942, 1/f/2106:2108 | NA | NA | ||
| 1/f/1947:1948, 1/f/2098:2101 | NA | NA | ||
| 1/f/2128:2129, 1/f/2323:2325 | NA | NA | ||
| 1/f/2156:2161, 1/f/2173:2180 | NA | NA | ||
| 1/f/2196:2199, 1/f/2245:2246 | NA | NA | ||
| 1/f/2200:2201, 1/f/2241:2244 | NA | NA | ||
| 1/f/2204:2206, 1/f/2237:2238 | NA | NA | ||
| 1/f/2206:2210, 1/f/2235:2237 | NA | NA | ||
| 1/f/2211:2217, 1/f/2228:2234 | NA | NA | ||
| 1/f/2276:2277, 1/f/2307:2310 | NA | NA | ||
| 1/f/2277:2288, 1/f/2304:2307 | NA | NA | ||
| 1/f/2391:2394, 1/f/2986:2988 | NA | NA | ||
| 1/f/2396:2398, 1/f/2981:2984 | NA | NA | ||
| 1/f/2409:2411, 1/f/2811:2812 | NA | NA | ||
| 1/f/2412:2413, 1/f/2807:2810 | NA | NA | ||
| 1/f/2423:2425, 1/f/2604:2607 | NA | NA | ||
| 1/f/2435:2437, 1/f/2510:2512 | NA | NA | ||
| 1/f/2444:2445, 1/f/2501:2503 | NA | NA | ||
| 1/f/2451:2462, 1/f/2493:2495 | NA | NA | ||
| 1/f/2466:2469, 1/f/2476:2489 | NA | NA | ||
| 1/f/2520:2526, 1/f/2584:2587 | NA | NA | ||
| 1/f/2614:2615, 1/f/2625:2627 | NA | NA | ||
| 1/f/2666:2668, 1/f/2686:2690 | NA | NA | ||
| 1/f/2718:2721, 1/f/2735:2738 | NA | NA | ||
| 1/f/2770:2773, 1/f/2787:2788 | NA | NA | ||
| 1/f/2823:2824, 1/f/2865:2867 | NA | NA | ||
| 1/f/2824:2826, 1/f/2863:2865 | NA | NA | ||
| 1/f/2826:2828, 1/f/2862:2863 | NA | NA | ||
| 1/f/2828:2830, 1/f/2858:2862 | NA | NA | ||
| 1/f/2835:2839, 1/f/2849:2853 | NA | NA | ||
| 1/f/2876:2877, 1/f/2949:2951 | NA | NA | ||
| 1/f/2879:2881, 1/f/2943:2947 | NA | NA | ||
| 1/f/2881:2882, 1/f/2940:2943 | NA | NA | ||
| 1/f/2889:2891, 1/f/2912:2914 | NA | NA | ||
| 1/f/2891:2892, 1/f/2909:2912 | NA | NA | ||
| 1/f/2918:2920, 1/f/2926:2928 | NA | NA | ||
| 1/f/2960:2961, 1/f/2970:2972 | NA | NA | ||
| 1/f/3004:3007, 1/f/3139:3144 | NA | NA | ||
| 1/f/3012:3014, 1/f/3040:3042 | NA | NA | ||
| 1/f/3018:3025, 1/f/3030:3036 | NA | NA | ||
| 1/f/3047:3051, 1/f/3091:3094 | NA | NA | ||
| 1/f/3054:3059, 1/f/3084:3088 | NA | NA | ||
| 1/f/3063:3064, 1/f/3077:3080 | NA | NA | ||
| 1/f/3103:3107, 1/f/3127:3131 | NA | NA | ||
| 1/f/3164:3166, 1/f/3284:3286 | NA | NA | ||
| 1/f/3168:3170, 1/f/3280:3282 | NA | NA | ||
| 1/f/3177:3179, 1/f/3210:3211 | NA | NA | ||
| 1/f/3179:3188, 1/f/3204:3210 | NA | NA | ||
| 1/f/3193:3194, 1/f/3197:3199 | NA | NA | ||
| 1/f/3225:3229, 1/f/3258:3260 | NA | NA | ||
| 1/f/3233:3235, 1/f/3252:3254 | NA | NA | ||
| 1/f/3235:3238, 1/f/3249:3252 | NA | NA | ||
| 1/f/3300:3303, 1/f/3311:3314 | NA | NA | ||
| 1/f/3318:3320, 1/f/3387:3388 | NA | NA | ||
| 1/f/3324:3325, 1/f/3381:3383 | NA | NA | ||
| 1/f/3328:3330, 1/f/3373:3378 | NA | NA | ||
| 1/f/3332:3337, 1/f/3367:3371 | NA | NA | ||
| 1/f/3340:3342, 1/f/3363:3364 | NA | NA | ||
| 1/f/3342:3345, 1/f/3360:3363 | NA | NA | ||
| 1/f/3349:3350, 1/f/3353:3356 | NA | NA | ||
| 1/h/15:16, 1/h/63:65 | NA | NA | ||
| 1/h/21:27, 1/h/53:58 | NA | NA | ||
| 1/h/28:29, 1/h/49:52 | NA | NA | ||
| 1/h/29:30, 1/h/47:49 | NA | NA | ||
| 1/h/32:36, 1/h/41:45 | NA | NA | ||
| 1/h/72:80, 1/h/100:106 | NA | NA | ||
| 1/h/84:87, 1/h/94:96 | NA | NA | ||
| 1/i/44:64, 1/i/96:100 | NA | NA | ||
| 1/i/64:66, 1/i/93:96 | NA | NA | ||
| 1/i/68:69, 1/i/89:91 | NA | NA | ||
| 1/x/5:7, 1/x/66:68 | NA | NA | ||
| 1/y/5:7, 1/y/66:68 | NA | NA |
Problematic loops
No problematic loops
Valid loops
| # | loop id | location | annotation (mapped to, source) | motif group (similar to) |
|---|---|---|---|---|
| 1/f/113:123, 1/f/149:158, 1/f/263:267 | NA | NA | ||
| 1/f/369:376, 1/f/403:404, 1/i/19:20 | NA | NA | ||
| 1/f/502:503, 1/f/588:597, 1/f/606:611 | NA | NA | ||
| 1/f/814:820, 1/f/905:907, 1/f/923:926 | NA | NA | ||
| 1/f/828:831, 1/f/863:867, 1/f/892:897 | NA | NA | ||
| 1/f/986:987, 1/f/1062:1066, 1/f/1092:1098 | NA | NA | ||
| 1/f/1230:1232, 1/f/1256:1262, 1/f/1277:1279 | NA | NA | ||
| 1/f/1479:1485, 1/f/1857:1859, 1/f/1871:1874 | NA | NA | ||
| 1/f/1488:1491, 1/f/1837:1843, 1/f/1852:1854 | NA | NA | ||
| 1/f/1526:1531, 1/f/1591:1595, 1/f/1612:1613 | NA | NA | ||
| 1/f/1631:1632, 1/f/1641:1645, 1/f/1810:1811 | NA | NA | ||
| 1/f/2432:2435, 1/f/2512:2517, 1/f/2590:2597 | NA | NA | ||
| 1/f/2529:2532, 1/f/2547:2563, 1/f/2578:2581 | NA | NA | ||
| 1/f/2664:2666, 1/f/2690:2692, 1/f/2701:2706 | NA | NA | ||
| 1/f/2886:2889, 1/f/2914:2916, 1/f/2930:2936 | NA | NA | ||
| 1/f/3298:3300, 1/f/3314:3318, 1/f/3388:3390 | NA | NA | ||
| 1/h/9:14, 1/h/66:67, 1/h/111:112 | NA | NA |
Problematic loops
No problematic loops
Coloring options: