Character Definition | A,C,G,U,* // Define characters here
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [5] // Initial node A202 - U207 from junction 
BasepairNode | Deletion Probability [0.0000004444241139] | Pair Probability [[0.009228795,0.019179884,0.010238170,0.216808949,0.000000000],[0.018533875,0.009460985,0.216925123,0.011842533,0.000000000],[0.010289084,0.196034129,0.002025733,0.037602685,0.000000000],[0.194873981,0.011923789,0.024413241,0.010619045,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.995990040,0.003999960,0.000010000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.253667482,0.736552567,0.009321516,0.000458435] | Right Letter Distribution [0.300000000,0.100000000,0.100000000,0.500000000,0.000000000] | Left Index [1] | Right Index [5] // Basepair A202 - U207 cWW 
BasepairNode | Deletion Probability [0.0000060823043662] | Pair Probability [[0.107010574,0.113285114,0.001284591,0.046687034,0.000000000],[0.107805585,0.113022792,0.001284591,0.001284591,0.000000000],[0.157305214,0.001284591,0.006279955,0.109031193,0.000000000],[0.119452378,0.112412618,0.001284591,0.001284591,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.995990040,0.003999960,0.000010000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.741082411,0.255227552,0.003536285,0.000153752] | Right Letter Distribution [0.500000000,0.166666667,0.166666667,0.166666667,0.000000000] | Left Index [2] | Right Index [4] // Basepair G203 - A205 tSH 
HairpinNode  | Num Bases [1] | Left Index [3] | Right Index [3] | Norm Constant [1.000000000000000] // Hairpin node A204:A204
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.416666667,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.250000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.083333333,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.250000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position A204
