Character Definition | A,C,G,U,* // Define characters here
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [7] // Initial node G23 - C29 from junction 
BasepairNode | Deletion Probability [0.0000017102807318] | Pair Probability [[0.008642056,0.017479640,0.009921850,0.168007953,0.000000000],[0.030720937,0.009404426,0.169693359,0.011831898,0.000000000],[0.009837554,0.303581170,0.001904001,0.022870291,0.000000000],[0.168572384,0.012172502,0.046130308,0.009229670,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.561258214,0.437225398,0.001448346,0.000068043] | Left Letter Distribution [0.166666667,0.055555556,0.500000000,0.277777778,0.000000000] | Right Length Distribution [0.934446650,0.065203005,0.000340613,0.000009732] | Right Letter Distribution [0.500000000,0.166666667,0.166666667,0.166666667,0.000000000] | Left Index [1] | Right Index [7] // Basepair G23 - C29 cWW 
HairpinNode  | Num Bases [5] | Left Index [2] | Right Index [6] | Norm Constant [1.000000000000000] // Hairpin node A24:G28
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.583333333,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.138888889,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.138888889,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.138888889,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position A24
Interaction  | Interacting Bases [2,2] | Pair Probability [[0.027777778,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.638888889,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.194444444,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.138888889,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position C25
Interaction  | Interacting Bases [3,3] | Pair Probability [[0.027777778,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.472222222,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.138888889,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.361111111,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position U26
Interaction  | Interacting Bases [4,4] | Pair Probability [[0.416666667,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.138888889,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.416666667,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.027777778,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position G27
Interaction  | Interacting Bases [5,5] | Pair Probability [[0.138888889,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.194444444,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.527777778,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.138888889,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position G28
