Character Definition | A,C,G,U,* // Define characters here
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [5] // Initial node U18 - A23 from junction 
BasepairNode | Deletion Probability [0.0000244705618206] | Pair Probability [[0.008922170,0.017743555,0.010103043,0.186825820,0.000000000],[0.017689168,0.009026441,0.208316861,0.012070633,0.000000000],[0.010068672,0.237156075,0.001945841,0.023587200,0.000000000],[0.206056080,0.012088270,0.028846556,0.009553614,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.997990020,0.001999980,0.000010000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.997990020,0.001999980,0.000010000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [5] // Basepair U18 - A23 cWW 
HairpinNode  | Num Bases [3] | Left Index [2] | Right Index [4] | Norm Constant [1.000000000000000] // Hairpin node U19:U22
Interaction  | Interacting Bases [2,3] | Pair Probability [[0.074204418,0.075610898,0.004157321,0.073893488,0.000000000],[0.055398446,0.083486430,0.000920502,0.074048396,0.000000000],[0.064832555,0.000920502,0.079084665,0.174618960,0.000000000],[0.075355769,0.074903398,0.000920502,0.087643751,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin Interaction G21 - U22 cSH 
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.136363636,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.045454545,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.045454545,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.772727273,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position U19
Insertion    | Location [1] | Length Distribution [0.114812666,0.880026871,0.004916181,0.000244282] | Letter Distribution [0.050000000,0.050000000,0.850000000,0.050000000,0.000000000]// Insertion in Hairpin after nucleotide 2, position 1
