Character Definition | A,C,G,U,* // Define characters here
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [3] // Initial node C7 - G11 from junction 
BasepairNode | Deletion Probability [0.0000000002154747] | Pair Probability [[0.008721103,0.017144279,0.009787395,0.203278453,0.000000000],[0.018323255,0.008988275,0.233709382,0.011595052,0.000000000],[0.009833070,0.195155539,0.001920276,0.027504657,0.000000000],[0.204236657,0.011408055,0.028739099,0.009655453,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.003959416,0.792873051,0.201930215,0.001187825,0.000049493] | Left Letter Distribution [0.035714286,0.035714286,0.178571429,0.750000000,0.000000000] | Right Length Distribution [0.004949270,0.989853997,0.004949270,0.000247463] | Right Letter Distribution [0.125000000,0.208333333,0.041666667,0.625000000,0.000000000] | Left Index [1] | Right Index [3] // Basepair C7 - G11 cWW 
HairpinNode  | Num Bases [1] | Left Index [2] | Right Index [2] | Norm Constant [1.000000000000000] // Hairpin node G9:G9
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.291666667,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.125000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.375000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.208333333,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position G9
