Character Definition | A,C,G,U,* // Define characters here
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [6] // Initial node C458 - G474 from junction 
BasepairNode | Deletion Probability [0.0000244705618206] | Pair Probability [[0.009090007,0.015887961,0.010496925,0.168095018,0.000000000],[0.052889839,0.011354317,0.221159565,0.012641051,0.000000000],[0.010611065,0.170166497,0.002106515,0.021025473,0.000000000],[0.195823217,0.012025535,0.076676079,0.009950935,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.997990020,0.001999980,0.000010000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.997990020,0.001999980,0.000010000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [6] // Basepair C458 - G474 cWW 
BasepairNode | Deletion Probability [0.0000244705618206] | Pair Probability [[0.094627850,0.097558487,0.001614695,0.053331582,0.000000000],[0.094362199,0.097387718,0.001614695,0.001614695,0.000000000],[0.188489829,0.001614695,0.067988736,0.095513706,0.000000000],[0.103750567,0.097301154,0.001614695,0.001614695,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.997990020,0.001999980,0.000010000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.997990020,0.001999980,0.000010000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [2] | Right Index [5] // Basepair G459 - A463 tSH 
HairpinNode  | Num Bases [2] | Left Index [3] | Right Index [4] | Norm Constant [1.000000000000000] // Hairpin node A460:G462
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.350000000,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.150000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.350000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.150000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position A460
Interaction  | Interacting Bases [2,2] | Pair Probability [[0.450000000,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.050000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.350000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.150000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position G462
Insertion    | Location [1] | Length Distribution [0.374980671,0.620844286,0.003981754,0.000193289] | Letter Distribution [0.214285714,0.500000000,0.071428571,0.214285714,0.000000000]// Insertion in Hairpin after nucleotide 3, position 1
