Character Definition | A,C,G,U,* // Define characters here
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [3] // Initial node C55 - G58 from junction 
BasepairNode | Deletion Probability [0.0000000352713031] | Pair Probability [[0.008236672,0.014977105,0.009395839,0.172923817,0.000000000],[0.017948791,0.008485807,0.299996653,0.011600188,0.000000000],[0.009487208,0.175712836,0.001814837,0.020393308,0.000000000],[0.201661815,0.011135483,0.027419546,0.008810094,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.002407629,0.819109693,0.177820580,0.000636302,0.000025796] | Left Letter Distribution [0.250000000,0.113636364,0.113636364,0.522727273,0.000000000] | Right Length Distribution [0.938289488,0.061391483,0.000310406,0.000008622] | Right Letter Distribution [0.166666667,0.166666667,0.166666667,0.500000000,0.000000000] | Left Index [1] | Right Index [3] // Basepair C55 - G58 cWW 
HairpinNode  | Num Bases [1] | Left Index [2] | Right Index [2] | Norm Constant [1.000000000000000] // Hairpin node A57:A57
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.447368421,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.131578947,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.184210526,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.236842105,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] // Hairpin conserved non-basepairing position A57
