Character Definition | A,C,G,U,* // Define characters here
InitialNode  | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [4] // Initial node U8 - G62 from junction 
BasepairNode | Deletion Probability [0.0000000271147100] | Pair Probability [[0.010702699,0.016783297,0.012494699,0.122953415,0.000000000],[0.140350536,0.011316626,0.140267993,0.014057445,0.000000000],[0.012620575,0.147815512,0.002612924,0.020297266,0.000000000],[0.136064500,0.013442467,0.186203276,0.012016769,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.005028411,0.705988837,0.286619400,0.002262785,0.000100568] | Left Letter Distribution [0.318181818,0.318181818,0.136363636,0.227272727,0.000000000] | Right Length Distribution [0.997990020,0.001999980,0.000010000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [1] | Right Index [4] // Basepair U8 - G62 cWW 
BasepairNode | Deletion Probability [0.0000249735224443] | Pair Probability [[0.010385667,0.058169139,0.011455548,0.165758616,0.000000000],[0.017993502,0.008638993,0.193985419,0.012726239,0.000000000],[0.011390673,0.204901754,0.002227363,0.077341640,0.000000000],[0.175133380,0.013032785,0.023085878,0.013773406,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000]] | Left Length Distribution [0.999900000,0.000100000] | Left Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Right Length Distribution [0.999900000,0.000100000] | Right Letter Distribution [0.250000000,0.250000000,0.250000000,0.250000000,0.000000000] | Left Index [2] | Right Index [3] // Basepair C11 - G61 cWW 
HairpinNode  | Num Bases [1] | Left Index [3] | Right Index [3] | Norm Constant [1.000000000000000] // Hairpin node type *
Interaction  | Interacting Bases [1,1] | Pair Probability [[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,0.000000000],[0.000000000,0.000000000,0.000000000,0.000000000,1.000000000]] // Hairpin for truncation
