3D structure

PDB id
4NVV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUAACUAUAAC
Length
11 nucleotides
Bulged bases
4NVV|1|A|A|1935
QA status
QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_99908.3
Basepair signature
cWW-cSH-tHW-R-R-R
Number of instances in this motif group
7

Unit IDs

4NVV|1|A|G|1932
4NVV|1|A|U|1933
4NVV|1|A|A|1934
4NVV|1|A|A|1935
4NVV|1|A|C|1936
4NVV|1|A|U|1937
4NVV|1|A|A|1938
4NVV|1|A|U|1939
4NVV|1|A|A|1940
4NVV|1|A|A|1941
4NVV|1|A|C|1942

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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