HL_6RM3_032

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAUCAUAA

Length

8 nucleotides

Bulged bases

6RM3|1|L50|U|1400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6RM3_032 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.2636

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6RM3|1|L50|U|1398
6RM3|1|L50|A|1399
6RM3|1|L50|U|1400
6RM3|1|L50|C|1401
6RM3|1|L50|A|1402
6RM3|1|L50|U|1403
6RM3|1|L50|A|1404
6RM3|1|L50|A|1405

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LR0

eL19