IL_7OPE_042
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUAGACAA*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 7OPE|1|A|A|1092
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OPE_042 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.1496
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
7OPE|1|A|C|1089
7OPE|1|A|U|1090
7OPE|1|A|U|1091
7OPE|1|A|A|1092
7OPE|1|A|G|1093
7OPE|1|A|A|1094
7OPE|1|A|C|1095
7OPE|1|A|A|1096
7OPE|1|A|A|1097
*
7OPE|1|A|U|1154
7OPE|1|A|C|1155
7OPE|1|A|G|1156
7OPE|1|A|A|1157
7OPE|1|A|G|1158
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L6
- Chain L
- 50S ribosomal protein L10
- Chain j
- 50S ribosomal protein L36
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