IL_7PIA_061
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- CGUAAG*CGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 7PIA|1|3|G|1733
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_061 not in the Motif Atlas
- Geometric match to IL_7A0S_063
- Geometric discrepancy: 0.2643
- The information below is about IL_7A0S_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PIA|1|3|C|1720
7PIA|1|3|G|1721
7PIA|1|3|U|1722
7PIA|1|3|A|1723
7PIA|1|3|A|1724
7PIA|1|3|G|1725
*
7PIA|1|3|C|1730
7PIA|1|3|G|1731
7PIA|1|3|A|1732
7PIA|1|3|G|1733
7PIA|1|3|A|1734
7PIA|1|3|A|1735
7PIA|1|3|G|1736
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Small subunit ribosomal RNA; SSU rRNA
- Chain a
- 50S ribosomal protein L2
Coloring options: