IL_7PIA_204
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- CCUAAU*AGG
- Length
- 9 nucleotides
- Bulged bases
- 7PIA|1|5|C|49, 7PIA|1|5|U|50, 7PIA|1|5|A|51, 7PIA|1|5|A|52
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_204 not in the Motif Atlas
- Homologous match to IL_5J7L_003
- Geometric discrepancy: 0.3236
- The information below is about IL_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7PIA|1|5|C|48
7PIA|1|5|C|49
7PIA|1|5|U|50
7PIA|1|5|A|51
7PIA|1|5|A|52
7PIA|1|5|U|53
*
7PIA|1|5|A|355
7PIA|1|5|G|356
7PIA|1|5|G|357
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain K
- 30S ribosomal protein S12
Coloring options: