J3_6RM3_009
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCAUAU*AG*UG
- Length
- 10 nucleotides
- Bulged bases
- 6RM3|1|L70|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6RM3_009 not in the Motif Atlas
- Homologous match to J3_5TBW_045
- Geometric discrepancy: 0.1618
- The information below is about J3_5TBW_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52398.1
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
6RM3|1|L70|C|9
6RM3|1|L70|C|10
6RM3|1|L70|A|11
6RM3|1|L70|U|12
6RM3|1|L70|A|13
6RM3|1|L70|U|14
*
6RM3|1|L70|A|65
6RM3|1|L70|G|66
*
6RM3|1|L70|U|109
6RM3|1|L70|G|110
Current chains
- Chain L70
- 5S rRNA
Nearby chains
- Chain L50
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD0
- uL18
- Chain LI0
- uL16
- Chain LT0
- eL21
Coloring options: