Motif HL_00557.1 Version HL_00557.1 of this group appears in releases 4.0 to 4.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8B0X_064 | 8B0X | 0.0000 | 2 | Mini UNCG with extended bulge (H) | a | LSU rRNA | C | 1453 | G | 1454 | G | 1457 | G | 1458 | U | 1459 | U | 1460 | G | 1461 | cWW |
| 2 | HL_9DFE_035 | 9DFE | 0.6415 | 1 | Mini UNCG with extended bulge (H) | 1A | LSU rRNA | C | 1451 | A | 1452 | G | 1455 | G | 1456 | A | 1457 | C | 1458 | G | 1459 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGACGGUUG | 1 |
| CAUGGACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACGGUU | 1 |
| AUGGAC | 1 |
- Annotations
-
- Mini UNCG with extended bulge (H) (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.64 | Avg 0.32 | Max 0.64
Coloring options: