Motif HL_03345.1 Version HL_03345.1 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6MJ0_006 | 6MJ0 | 0.5013 | 2 | B | tRNA-like 3' UTR element | U | 12 | C | 13 | U | 14 | U | 15 | A | 18 | A | 19 | A | 20 | cWW | cSW | ncSH |
| 2 | HL_5TBW_015 | 5TBW | 0.0000 | 2 | 1 | LSU rRNA | G | 686 | U | 687 | G | 688 | A | 690 | A | 692 | A | 693 | C | 694 | cWW | tSH | |
| 3 | HL_8C3A_015 | 8C3A | 0.0673 | 2 | 1 | LSU rRNA | G | 684 | U | 685 | G | 686 | A | 688 | A | 690 | A | 691 | C | 692 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGUAAAAC | 2 |
| UCUUUAAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGUAAAA | 2 |
| CUUUAAA | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cSW-tSH-F
- Heat map statistics
- Min 0.07 | Avg 0.24 | Max 0.51
Coloring options: