Motif HL_06569.1 Version HL_06569.1 of this group appears in releases 3.48 to 3.53
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4C9D_002 | 4C9D | 0.3515 | 0 | D | R3 REPEAT RNA CLEAVAGE PRODUCT | C | 21 | G | 22 | U | 23 | A | 24 | G | 25 | ncWW | ||
| 2 | HL_7A0S_007 | 7A0S | 0.0000 | 1 | X | LSU rRNA | A | 202 | G | 203 | A | 204 | A | 205 | U | 207 | cWW | cSW | |
| 3 | HL_4Y4O_109 | 4Y4O | 0.1872 | 1 | 2A | LSU rRNA | A | 225 | G | 226 | A | 227 | A | 228 | U | 230 | cWW | ntSH | |
| 4 | HL_5TBW_075 | 5TBW | 0.5610 | 2 | 4 | 5.8S rRNA | C | 108 | A | 109 | C | 110 | U | 112 | G | 114 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAG | 1 |
| AGAAUU | 1 |
| AGAAAU | 1 |
| CACAUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA | 1 |
| GAAU | 1 |
| GAAA | 1 |
| ACAUU | 1 |
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