Motif HL_07306.1 Version HL_07306.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_5J7L_163 | 5J7L | 0.7137 | 5 | DA | LSU rRNA | G | 1171 | C | 1172 | C | 1178 | ncWW |
2 | HL_4WT8_135 | 4WT8 | 0.4229 | 7 | C3 | tRNA | C | 13 | A | 14 | G | 22 | ncWW |
3 | HL_4RDX_001 | 4RDX | 0.1300 | 8 | C | tRNA | C | 13 | A | 14 | G | 22 | cWW |
4 | HL_7UQ6_001 | 7UQ6 | 0.0000 | 6 | B | tRNA | C | 13 | A | 14 | G | 21 | cWW |
5 | HL_7EQJ_004 | 7EQJ | 0.1369 | 7 | B | tRNA | C | 13 | A | 14 | G | 22 | cWW |
6 | HL_6UGG_004 | 6UGG | 0.1275 | 8 | B | tRNA | C | 12 | A | 13 | G | 22 | cWW |
7 | HL_4V90_032 | 4V90 | 0.1726 | 7 | AV | tRNA | C | 13 | A | 14 | G | 22 | cWW |
8 | HL_6ORD_035 | 6ORD | 0.2771 | 7 | QY | tRNA | C | 13 | A | 14 | G | 22 | ncWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CAGCUGGGAG | 2 |
GCUUAUGC | 1 |
CAGUCGGUAG | 1 |
CAGCUGGUUAG | 1 |
CAGUGGUAG | 1 |
CAGUCGGUUAG | 1 |
CAGCCGGUAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGCUGGGA | 2 |
CUUAUG | 1 |
AGUCGGUA | 1 |
AGCUGGUUA | 1 |
AGUGGUA | 1 |
AGUCGGUUA | 1 |
AGCCGGUA | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.Coloring options: