Motif HL_20843.1 Version HL_20843.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 4-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2A64_005 | 2A64 | 0.0000 | 0 | A | RNase P class B | G | 288 | G | 289 | A | 290 | A | 291 | A | 292 | U | 293 | G | 294 | A | 295 | A | 296 | C | 297 | cWW | tSH | tHW |
| 2 | HL_3DHS_004 | 3DHS | 0.2350 | 0 | A | RNase P class B | G | 288 | G | 289 | A | 290 | A | 291 | A | 292 | U | 293 | G | 294 | A | 295 | A | 296 | C | 297 | cWW | ntSH | tHW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAAUGAAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAAUGAA | 2 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-tHW-R-R-R-R
- Heat map statistics
- Min 0.24 | Avg 0.12 | Max 0.24
Coloring options: