Motif HL_24958.1 Version HL_24958.1 of this group appears in releases 3.26 to 3.31
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6U8D_003 | 6U8D | 1.0675 | 1 | A | JIIIabc RNA (68-MER) | C | 232 | U | 234 | G | 235 | cWW | |
| 2 | HL_6AAX_001 | 6AAX | 0.7737 | 3 | B | RNA (28-mer) | U | 933 | A | 936 | A | 938 | cWW | |
| 3 | HL_5J7L_176 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | C | 1728 | C | 1730 | G | 1731 | ncWW | |
| 4 | HL_5AH5_007 | 5AH5 | 0.3857 | 2 | D | tRNA | C | 46|||A | C | 46|||C | G | 46|||E | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUG | 1 |
| UGGAAA | 1 |
| CUCG | 1 |
| CUCUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GU | 1 |
| GGAA | 1 |
| UC | 1 |
| UCU | 1 |
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