#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 71-72-63-6
1 HL_5T83_0035T830.79632AGuanidine-I riboswitchG77A78U79A80A81A82C85cWWtWH
2 HL_6DLR_0036DLR0.80732AGuanidine-I riboswitchG82A83U84A85G86A87C90cWWtWH
3 HL_7MLW_0037MLW0.80392FGuanidine-I riboswitchG112A113U114A115A116A117C120cWWtWH
4 HL_5X2G_0035X2G0.73452BsgRNAG73U74U75C77A78A79C81cWWtWH
5 HL_8VTW_0358VTW0.100031A LSU rRNAG1389U1390U1391A1393U1394A1395C1398cWWtWH
6 HL_5J7L_1685J7L0.09183DA LSU rRNAG1389U1390U1391A1393U1394A1395C1398cWWtWH
7 HL_4V9F_0374V9F0.000030 LSU rRNAG1498U1499U1500A1502U1503A1504C1507cWWtWH
8 HL_4WF9_0354WF90.10573X LSU rRNAG1426U1427U1428A1430U1431A1432C1435cWWtWH
9 HL_8C3A_0358C3A0.120431 LSU rRNAG1595U1596U1597A1599A1600A1601C1604cWWtWH
10 HL_5TBW_0355TBW0.127231 LSU rRNAG1599U1600U1601A1603G1604A1605C1608cWWtWH

3D structures

Complete motif including flanking bases
SequenceCounts
GUUAAUAUUC3
GAUAAAAGC2
GAUAGAAGC1
GUUACAAUC1
GUUGAUAUUC1
GUUAAAAUUC1
GUUAAGAUUC1
Non-Watson-Crick part of the motif
SequenceCounts
UUAAUAUU3
AUAAAAG2
AUAGAAG1
UUACAAU1
UUGAUAUU1
UUAAAAUU1
UUAAGAUU1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (10)
  • Basepair signature
    cWW-tWH-F-F-F
    Heat map statistics
    Min 0.08 | Avg 0.48 | Max 0.88
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