Motif HL_46766.2 Version HL_46766.2 of this group appears in releases 3.80 to 3.87
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-7 | 1-8 | 2-6 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_7A0S_051 | 7A0S | 0.0000 | 1 | X | LSU rRNA | A | 2188 | A | 2190 | A | 2191 | U | 2192 | C | 2193 | A | 2194 | C | 2195 | U | 2196 | ncWW | cWW | ||
2 | HL_4V88_203 | 4V88 | 0.9321 | 1 | A6 | SSU rRNA | U | 764 | U | 766 | U | 767 | C | 768 | A | 769 | A | 770 | A | 771 | G | 772 | cWW | tWH | ||
3 | HL_8C3A_208 | 8C3A | 0.9409 | 1 | CM | SSU rRNA | U | 749 | U | 751 | U | 752 | C | 753 | A | 754 | A | 755 | A | 756 | G | 757 | cWW | tWH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGUUCAAAG | 2 |
AAAAUCACU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GUUCAAA | 2 |
AAAUCAC | 1 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-tWH-F-F-F-F
- Heat map statistics
- Min 0.11 | Avg 0.44 | Max 0.94
Coloring options: