#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 41-4
1 HL_6UFG_0066UFG0.24797tRNA D-loopB tRNAC13A14G15G23cWW
2 HL_5WWT_0015WWT0.20775tRNA D-loopC tRNAC13A14G15G22cWW
3 HL_1GAX_0041GAX0.21655tRNA D-loopDTRNA(VAL)C913A914G915G921cWW
4 HL_5WT1_0015WT10.14247tRNA D-loopC tRNAC13A14G15G22cWW
5 HL_2CSX_0012CSX0.00007tRNA D-loopCRNA (75-MER)C13A14G15G22cWW
6 HL_7OSM_1157OSM0.34206tRNA D-loopASIT tRNAC13A14G15G22ncWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAGGCGGUUAG1
CAGGGGUAG1
CAGCGGAAG1
CAGCCUGGGAG1
CAGCUGGUCAG1
CAGUCGGUAG1
Non-Watson-Crick part of the motif
SequenceCounts
AGGCGGUUA1
AGGGGUA1
AGCGGAA1
AGCCUGGGA1
AGCUGGUCA1
AGUCGGUA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tRNA D-loop (6)
  • Basepair signature
    cWW-F-F
    Heat map statistics
    Min 0.14 | Avg 0.31 | Max 1.00
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