Motif HL_53253.1 Version HL_53253.1 of this group appears in releases 3.85 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 3-7 | 4-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8JY0_003 | 8JY0 | 0.1392 | 3 | B | G | 42 | C | 43 | A | 44 | A | 45 | G | 46 | A | 50 | A | 51 | C | 52 | C | 53 | cWW | csS | cSs |
| 2 | HL_9BUN_003 | 9BUN | 0.0000 | 3 | A | G | 26 | C | 27 | A | 28 | A | 29 | G | 30 | A | 34 | A | 35 | C | 36 | C | 37 | cWW | csS | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAAGGUUAACC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAAGGUUAAC | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-cSS-cSS-F
- Heat map statistics
- Min 0.14 | Avg 0.07 | Max 0.14
Coloring options: