Motif HL_57065.1 Version HL_57065.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4C9D_002 | 4C9D | 0.3955 | 0 | D | R3 REPEAT RNA CLEAVAGE PRODUCT | C | 21 | G | 22 | U | 23 | A | 24 | G | 25 | ncWW | ||
| 2 | HL_4IOA_007 | 4IOA | 0.2573 | 1 | X | LSU rRNA | A | 202 | G | 203 | A | 204 | A | 205 | U | 207 | cWW | ||
| 3 | HL_4Y4O_109 | 4Y4O | 0.0000 | 1 | 2A | LSU rRNA | A | 225 | G | 226 | A | 227 | A | 228 | U | 230 | cWW | ntSH | |
| 4 | HL_4V5O_039 | 4V5O | 0.5295 | 1 | BA | SSU rRNA | C | 185 | C | 186 | U | 187 | G | 188 | G | 190 | cWW | ||
| 5 | HL_4V8P_080 | 4V8P | 0.5458 | 2 | C2 | 5.8S rRNA | C | 109 | A | 110 | A | 111 | U | 113 | G | 115 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAG | 1 |
| AGAAUU | 1 |
| AGAAAU | 1 |
| CCUGCG | 1 |
| CAAGUGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA | 1 |
| GAAU | 1 |
| GAAA | 1 |
| CUGC | 1 |
| AAGUG | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: